FFCP PHASE1:Hg19::chr21:39705383..39705394,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_ENST00000436845_5end | |association_with_transcript=-40bp_to_ENST00000436845_5end | ||
|cluster_id=chr21:39705383..39705394,- | |||
|coexpression_cluster_id=C2632 | |coexpression_cluster_id=C2632 | ||
|description=CAGE_peak_1_at_ENST00000436845_5end | |description=CAGE_peak_1_at_ENST00000436845_5end | ||
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|ontology_enrichment_celltype_v019_2=CL:0002602,6.77e-24,2;CL:0002540,1.29e-18,6;CL:0000135,5.75e-17,3;CL:0000388,5.75e-17,3;CL:0000214,7.90e-17,3;CL:0002564,1.27e-16,3;CL:0000153,2.60e-12,9;CL:0000447,2.60e-12,9;CL:0002092,2.07e-11,10;CL:0000499,1.70e-10,28;CL:0000327,1.34e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@ENST00000436845 | |short_description=p1@ENST00000436845 | ||
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Latest revision as of 17:52, 28 July 2015
Short description: | p1@ENST00000436845 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000436845_5end |
Coexpression cluster: | C2632_Synoviocyte_mesenchymal_tenocyte_thyroid_Nucleus_Skeletal_Myoblast |
Association with transcript: | -40bp_to_ENST00000436845_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 6.77e-24 | 2 |
mesenchymal stem cell of the bone marrow | 1.29e-18 | 6 |
fibrocyte | 5.75e-17 | 3 |
tendon cell | 5.75e-17 | 3 |
synovial cell | 7.90e-17 | 3 |
nucleus pulposus cell of intervertebral disc | 1.27e-16 | 3 |
GAG secreting cell | 2.60e-12 | 9 |
carbohydrate secreting cell | 2.60e-12 | 9 |
bone marrow cell | 2.07e-11 | 10 |
stromal cell | 1.70e-10 | 28 |
extracellular matrix secreting cell | 1.34e-07 | 15 |