FFCP PHASE1:Hg19::chr1:6508571..6508581,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:6508571..6508581,+
|short_description=p13@ESPN
|description=CAGE_peak_13_at_ESPN_5end
|association_with_transcript=0bp_to_ENST00000478323_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83715 | |EntrezGene=83715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13281 | |HGNC=13281 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000478323_5end | |||
|cluster_id=chr1:6508571..6508581,+ | |||
|coexpression_cluster_id=C124 | |||
|description=CAGE_peak_13_at_ESPN_5end | |||
|id=chr1:6508571..6508581,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.61e-10!12;CL:0000417!4.61e-10!12;CL:0000668!4.61e-10!12;CL:0000414!4.61e-10!12;CL:0000412!4.61e-10!12;CL:0000182!4.61e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.29e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.29e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.09e-36;11!UBERON:0009497;9.12e-31;13!UBERON:0001041;1.19e-13;30!UBERON:0003104;4.27e-13;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.88e-13!19;UBERON:0006925!1.88e-13!19;UBERON:0008836!1.88e-13!19;UBERON:0008835!1.51e-11!22;UBERON:0003894!1.51e-11!22;UBERON:0009854!5.06e-11!23;UBERON:0007499!4.25e-10!25;UBERON:0009497!4.25e-10!25;UBERON:0000015!4.25e-10!25;UBERON:0002423!4.25e-10!25;UBERON:0006235!4.25e-10!25;UBERON:0004161!4.25e-10!25;UBERON:0004921!1.03e-09!129;UBERON:0004185!1.03e-09!129;UBERON:0005057!1.09e-09!26;UBERON:0009856!1.09e-09!26;UBERON:0000160!5.30e-09!27;UBERON:0000989!1.84e-08!1;UBERON:0008811!1.84e-08!1;UBERON:0006258!1.84e-08!1;UBERON:0005876!1.84e-08!1;UBERON:0004874!1.84e-08!1;UBERON:0001882!3.79e-08!1;UBERON:0005403!3.79e-08!1;UBERON:0002365!4.88e-08!31;UBERON:0002330!4.88e-08!31;UBERON:0001007!1.27e-07!155;UBERON:0001555!1.27e-07!155;UBERON:0007026!1.27e-07!155;UBERON:0002368!4.68e-07!35;UBERON:0005409!7.05e-07!35;UBERON:0004119!9.20e-07!169;UBERON:0000925!9.20e-07!169;UBERON:0006595!9.20e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.02e-21;19!UBERON:0006925;3.02e-21;19!UBERON:0002108;4.92e-21;4!UBERON:0002423;2.79e-16;25!UBERON:0000160;3.77e-13;17!UBERON:0002365;5.42e-12;31!UBERON:0002330;5.42e-12;31!UBERON:0002368;5.50e-12;33!UBERON:0005409;1.93e-10;22!UBERON:0002114;1.10e-09;2!UBERON:0000922;2.93e-09;49!UBERON:0000949;4.81e-08;43!UBERON:0001052;1.92e-07;4!UBERON:0001007;4.87e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.02e-21,19;UBERON:0006925,3.02e-21,19;UBERON:0008836,3.02e-21,19;UBERON:0002108,4.92e-21,4;UBERON:0008835,1.99e-18,22;UBERON:0003894,1.99e-18,22;UBERON:0009854,1.19e-17,23;UBERON:0007499,2.79e-16,25;UBERON:0009497,2.79e-16,25;UBERON:0000015,2.79e-16,25;UBERON:0002423,2.79e-16,25;UBERON:0006235,2.79e-16,25;UBERON:0004161,2.79e-16,25;UBERON:0009856,1.13e-15,26;UBERON:0002365,3.17e-13,31;UBERON:0002330,3.17e-13,31;UBERON:0000160,3.62e-13,17;UBERON:0002368,9.10e-12,35;UBERON:0004921,3.05e-10,118;UBERON:0002114,1.10e-09,2;UBERON:0005409,2.52e-09,25;UBERON:0000949,3.02e-09,45;UBERON:0001007,2.46e-08,145;UBERON:0001555,2.46e-08,145;UBERON:0007026,2.46e-08,145;UBERON:0003929,9.09e-08,54;UBERON:0005172,9.09e-08,54;UBERON:0005173,9.09e-08,54;UBERON:0004119,1.51e-07,160;UBERON:0000925,1.51e-07,160;UBERON:0006595,1.51e-07,160;UBERON:0001052,1.80e-07,4;UBERON:0002530,3.87e-07,59;UBERON:0002417,5.02e-07,60;UBERON:0000916,5.02e-07,60;UBERON:0011216,6.23e-07,223 | |||
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|short_description=p13@ESPN | |||
}} | }} |
Latest revision as of 21:48, 18 September 2015
Short description: | p13@ESPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ESPN_5end |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | 0bp_to_ENST00000478323_5end |
EntrezGene: | ESPN |
HGNC: | 13281 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.29e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.02e-21 | 19 |
digestive gland | 3.02e-21 | 19 |
liver bud | 3.02e-21 | 19 |
small intestine | 4.92e-21 | 4 |
hepatic diverticulum | 1.99e-18 | 22 |
liver primordium | 1.99e-18 | 22 |
digestive tract diverticulum | 1.19e-17 | 23 |
epithelial sac | 2.79e-16 | 25 |
epithelium of foregut-midgut junction | 2.79e-16 | 25 |
anatomical boundary | 2.79e-16 | 25 |
hepatobiliary system | 2.79e-16 | 25 |
foregut-midgut junction | 2.79e-16 | 25 |
septum transversum | 2.79e-16 | 25 |
sac | 1.13e-15 | 26 |
exocrine gland | 3.17e-13 | 31 |
exocrine system | 3.17e-13 | 31 |
intestine | 3.62e-13 | 17 |
endocrine gland | 9.10e-12 | 35 |
subdivision of digestive tract | 3.05e-10 | 118 |
duodenum | 1.10e-09 | 2 |
gastrointestinal system | 2.52e-09 | 25 |
endocrine system | 3.02e-09 | 45 |
digestive system | 2.46e-08 | 145 |
digestive tract | 2.46e-08 | 145 |
primitive gut | 2.46e-08 | 145 |
gut epithelium | 9.09e-08 | 54 |
abdomen element | 9.09e-08 | 54 |
abdominal segment element | 9.09e-08 | 54 |
endoderm-derived structure | 1.51e-07 | 160 |
endoderm | 1.51e-07 | 160 |
presumptive endoderm | 1.51e-07 | 160 |
rectum | 1.80e-07 | 4 |
gland | 3.87e-07 | 59 |
abdominal segment of trunk | 5.02e-07 | 60 |
abdomen | 5.02e-07 | 60 |
organ system subdivision | 6.23e-07 | 223 |