FFCP PHASE1:Hg19::chr10:102133437..102133463,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=28060 | |HGNC=28060 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=65bp_to_ENST00000454935_5end | |association_with_transcript=65bp_to_ENST00000454935_5end | ||
|cluster_id=chr10:102133437..102133463,+ | |||
|description=CAGE_peak_5_at_LINC00263_5end | |description=CAGE_peak_5_at_LINC00263_5end | ||
|id=chr10:102133437..102133463,+ | |id=chr10:102133437..102133463,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.25e-18!254 | |ontology_enrichment_celltype=CL:0000066!9.25e-18!254 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.79e-18,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.85e-12;29 | |ontology_enrichment_development_v019=UBERON:0008947;5.85e-12;29 | ||
|ontology_enrichment_disease=DOID:305!2.69e-22!106;DOID:0050687!4.89e-17!143;DOID:162!4.93e-08!235;DOID:14566!6.01e-08!239 | |ontology_enrichment_disease=DOID:305!2.69e-22!106;DOID:0050687!4.89e-17!143;DOID:162!4.93e-08!235;DOID:14566!6.01e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.51e-10;14!DOID:299;6.48e-10;25!DOID:305;9.96e-07;106 | |ontology_enrichment_disease_v019=DOID:1749;1.51e-10;14!DOID:299;6.48e-10;25!DOID:305;9.96e-07;106 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.79e-25,106;DOID:0050687,1.47e-18,143;DOID:1749,8.72e-11,14;DOID:299,1.05e-09,25;DOID:162,3.49e-09,235;DOID:14566,8.89e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0000033!2.53e-15!123;UBERON:0004121!7.98e-15!169;UBERON:0000064!2.12e-14!219;UBERON:0000153!3.37e-14!129;UBERON:0007811!3.37e-14!129;UBERON:0000924!1.13e-13!173;UBERON:0006601!1.13e-13!173;UBERON:0000475!1.42e-12!365;UBERON:0004119!3.09e-12!169;UBERON:0000925!3.09e-12!169;UBERON:0006595!3.09e-12!169;UBERON:0000063!3.88e-12!97;UBERON:0001007!2.09e-11!155;UBERON:0001555!2.09e-11!155;UBERON:0007026!2.09e-11!155;UBERON:0000062!3.27e-11!511;UBERON:0000481!3.65e-11!347;UBERON:0000077!5.39e-11!130;UBERON:0008947!6.72e-10!38;UBERON:0003258!6.72e-10!38;UBERON:0001004!7.20e-10!72;UBERON:0003075!3.45e-09!86;UBERON:0007284!3.45e-09!86;UBERON:0001444!1.67e-08!48;UBERON:0004921!4.95e-08!129;UBERON:0004185!4.95e-08!129;UBERON:0002346!5.47e-08!90;UBERON:0003056!5.80e-08!61;UBERON:0001041!1.42e-07!98;UBERON:0001737!1.70e-07!9;UBERON:0000072!2.23e-07!46;UBERON:0000073!2.24e-07!94;UBERON:0001016!2.24e-07!94;UBERON:0000065!2.56e-07!53;UBERON:0005743!6.96e-07!86 | |ontology_enrichment_uberon=UBERON:0000033!2.53e-15!123;UBERON:0004121!7.98e-15!169;UBERON:0000064!2.12e-14!219;UBERON:0000153!3.37e-14!129;UBERON:0007811!3.37e-14!129;UBERON:0000924!1.13e-13!173;UBERON:0006601!1.13e-13!173;UBERON:0000475!1.42e-12!365;UBERON:0004119!3.09e-12!169;UBERON:0000925!3.09e-12!169;UBERON:0006595!3.09e-12!169;UBERON:0000063!3.88e-12!97;UBERON:0001007!2.09e-11!155;UBERON:0001555!2.09e-11!155;UBERON:0007026!2.09e-11!155;UBERON:0000062!3.27e-11!511;UBERON:0000481!3.65e-11!347;UBERON:0000077!5.39e-11!130;UBERON:0008947!6.72e-10!38;UBERON:0003258!6.72e-10!38;UBERON:0001004!7.20e-10!72;UBERON:0003075!3.45e-09!86;UBERON:0007284!3.45e-09!86;UBERON:0001444!1.67e-08!48;UBERON:0004921!4.95e-08!129;UBERON:0004185!4.95e-08!129;UBERON:0002346!5.47e-08!90;UBERON:0003056!5.80e-08!61;UBERON:0001041!1.42e-07!98;UBERON:0001737!1.70e-07!9;UBERON:0000072!2.23e-07!46;UBERON:0000073!2.24e-07!94;UBERON:0001016!2.24e-07!94;UBERON:0000065!2.56e-07!53;UBERON:0005743!6.96e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.73e-13;9!UBERON:0001557;2.73e-13;9!UBERON:0000072;1.12e-10;37!UBERON:0002104;6.83e-08;21!UBERON:0007625;1.72e-07;11!UBERON:0000065;4.72e-07;44!UBERON:0000019;6.32e-07;19!UBERON:0000047;6.32e-07;19!UBERON:0004088;6.32e-07;19!UBERON:0010230;6.32e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.73e-13;9!UBERON:0001557;2.73e-13;9!UBERON:0000072;1.12e-10;37!UBERON:0002104;6.83e-08;21!UBERON:0007625;1.72e-07;11!UBERON:0000065;4.72e-07;44!UBERON:0000019;6.32e-07;19!UBERON:0000047;6.32e-07;19!UBERON:0004088;6.32e-07;19!UBERON:0010230;6.32e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.60e-13,9;UBERON:0008947,4.18e-11,38;UBERON:0003258,4.18e-11,38;UBERON:0000019,2.57e-08,20;UBERON:0000047,2.57e-08,20;UBERON:0010312,2.57e-08,20;UBERON:0004088,2.57e-08,20;UBERON:0010230,2.57e-08,20;UBERON:0003072,2.57e-08,20;UBERON:0004128,2.57e-08,20;UBERON:0003071,2.57e-08,20;UBERON:0000072,2.69e-08,47;UBERON:0000970,7.71e-08,21;UBERON:0002104,7.71e-08,21;UBERON:0007625,1.87e-07,11;UBERON:0001007,1.95e-07,145;UBERON:0001555,1.95e-07,145;UBERON:0007026,1.95e-07,145;UBERON:0001456,2.09e-07,22;UBERON:0001048,2.70e-07,160;UBERON:0001041,4.50e-07,87;UBERON:0003343,8.47e-07,4;UBERON:0004785,8.47e-07,4;UBERON:0000065,8.76e-07,54;UBERON:0004119,9.49e-07,160;UBERON:0000925,9.49e-07,160;UBERON:0006595,9.49e-07,160;UBERON:0001781,9.50e-07,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,2.62129646556207,0.791300934685361,0,0,0,0,0,0,0.738726348460727,0.204000691244253,0.313454721478088,0.572471974262113,0.821246550437305,1.63205431473244,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0.0774672005803016,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,1.79616152611729,0.886917589850256,0.966182642624386,0.196468613246569,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0.379891534993739,0.132409180813219,0,0,0,1.06748995729705,0.24666754841716,0,0,0.326923806226917,0.302714855289863,0.576175924479999,0.468642863667593,0,0,0,0.23486899728753,0.485618833104395,0.140450806702248,0.408308342509787,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0,0.336672227908132,0.375355559615893,1.93944880838928,0,0,0.300476117813194,0.113432183160021,0.179389635688862,0,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0.57978255948989,0.272746120590835,0.573609190778008,0.121973706129595,0,0.580969714347592,0.207322110030741,0,0,0,0,0,0,0,2.72105640091641,2.19160097101532,1.20505514941741,2.09558548191549,1.08939722046203,0.949082476444386,2.29213223872279,0.98110732562673,1.15424147083917,0,0,0,0,0,0,0,0,0.860919069801795,1.02940686179115,0.548751427043128,1.1240175325762,0.301586917234893,0,0.651616610620649,1.03993478527958,0,1.27523445472584,0.234817388471643,0,0,0,0.790204397959275,1.71697232418975,0,0,0,1.87467667973554,0.839910640994298,0.141775097242386,0.0895585227028483,0,0.383382679165211,0.492663237895943,0,0,0,0,0.507983154337352,2.67391897890794,0,0,0.719792448923265,1.50171528921959,2.5724378936752,0.672786506072164,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.797814349754612,0,0.514414748524284,0,0.266422179016099,0.57191197463259,0,1.64648067356154,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.718874566474748,0,0,0,0,0.179060963239896,0.112085143993527,0.197030760201927,0,0,1.01637849688985,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,0,0,2.0694614258501,0,0,0.173767228936166,0.783204629850962,1.37257369524342,0,0,0,0,1.66435439510497,0.604780586659361,0,0.153461973288062,0,0.256278298511402,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0,0,0,0.362578348774867,0.40101294060657,0.276242966807689,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,1.35473218771926,1.50506932156456,0,0,0.223874754722178,0,0,3.59030175162945,1.64007322849853,0,0.721287081534056,0.183138929636687,0.660075999364704,0.574265537996172,0.650060246036521,0,0,1.07834031980251,0.15350367472613,0.413509717453592,0.751941714077915,0.290033387828457,0.170453254832202,0.178064071293475,0.330569830721956,0,0.510450849978337,0.10115778085555,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,1.46290121726877,0,0,0.409499734223957,0.282810863907425,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,1.51789269506286,0.349934720244983,0.384888450902048,2.01090682660736,1.08890984861323,0.564862804660675,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,1.47024129588619,0.185803175125719,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0.33307196799782,0,3.92995134857262,0,4.00489721773394,0,0,0.95497793895076,0.593929361665277,0.921482106297696,0,0.140669416410513,0,0,0,0.19924798825107,0,0.251932747854276,0.306806047506464,0.123084805461069,0,0.629078458031288,0.895105873378046,0,0,0,0,1.93866549219044,0.556608588971108,0,0.520855522170466,8.39615999963479,0,0.1137934482855,2.03402920234213,1.18193840883968,0,0,0,0,0.120596438625408,0,0,0,0,0.435753854075961,0.278847488557207,0.307801034015188,0,0.23056390438806,1.79515288819544,3.25942115766024,3.50901275705111,0.549585560411174,6.92945208824225,0,0,0,0.225595660617181,0.19606253431774,0.503464760927528,0,0.158936578980379,0.421996129056054,0.816164040795739,0.848118428603645,1.08194319871046,0,0.176915129006678,0,0,0,0.313265848516366,1.41542379259422,0,0.937057782901357,0.182454789215666,1.36965233252463,0.242780379534093,0.394584402849391,0,0,0,0.450970258243478,0.207376382794494,0,0,0.313932918407225,1.19472429772959,0,0.277349346026277,1.04135843001079,1.56787835863004,2.00236175134926,0.698906672968121,0,0.290268993867255,0.950161122120412,0.985385484638511,0.581934098930517,0,0,0.137041924646751,0,0.443175571691151,1.36885967914362,0.40079410125766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| ||
|short_description=p5@LINC00263 | |short_description=p5@LINC00263 | ||
}} | }} |
Latest revision as of 21:34, 15 September 2015
Short description: | p5@LINC00263 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LINC00263_5end |
Coexpression cluster: | NA |
Association with transcript: | 65bp_to_ENST00000454935_5end |
EntrezGene: | NA |
HGNC: | 28060 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.79e-18 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.60e-13 | 9 |
respiratory primordium | 4.18e-11 | 38 |
endoderm of foregut | 4.18e-11 | 38 |
camera-type eye | 2.57e-08 | 20 |
simple eye | 2.57e-08 | 20 |
immature eye | 2.57e-08 | 20 |
ocular region | 2.57e-08 | 20 |
eyeball of camera-type eye | 2.57e-08 | 20 |
optic cup | 2.57e-08 | 20 |
optic vesicle | 2.57e-08 | 20 |
eye primordium | 2.57e-08 | 20 |
segment of respiratory tract | 2.69e-08 | 47 |
eye | 7.71e-08 | 21 |
visual system | 7.71e-08 | 21 |
pigment epithelium of eye | 1.87e-07 | 11 |
digestive system | 1.95e-07 | 145 |
digestive tract | 1.95e-07 | 145 |
primitive gut | 1.95e-07 | 145 |
face | 2.09e-07 | 22 |
primordium | 2.70e-07 | 160 |
foregut | 4.50e-07 | 87 |
mucosa of oral region | 8.47e-07 | 4 |
respiratory system mucosa | 8.47e-07 | 4 |
respiratory tract | 8.76e-07 | 54 |
endoderm-derived structure | 9.49e-07 | 160 |
endoderm | 9.49e-07 | 160 |
presumptive endoderm | 9.49e-07 | 160 |
layer of retina | 9.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.79e-25 | 106 |
cell type cancer | 1.47e-18 | 143 |
squamous cell carcinoma | 8.72e-11 | 14 |
adenocarcinoma | 1.05e-09 | 25 |
cancer | 3.49e-09 | 235 |
disease of cellular proliferation | 8.89e-09 | 239 |