FFCP PHASE1:Hg19::chr1:40157119..40157130,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:40157119..40157130,-
|short_description=p2@HPCAL4
|description=CAGE_peak_2_at_HPCAL4_5end
|association_with_transcript=-30bp_to_NM_016257,uc001cdr.2,uc010o...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51440 | |EntrezGene=51440 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18212 | |HGNC=18212 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UM19 | |UniProt=Q9UM19 | ||
|association_with_transcript=-30bp_to_NM_016257,uc001cdr.2,uc010oix.1_5end | |||
|cluster_id=chr1:40157119..40157130,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_HPCAL4_5end | |||
|id=chr1:40157119..40157130,- | |||
|ontology_enrichment_celltype=CL:0000791!1.38e-09!18;CL:0000789!1.38e-09!18;CL:0002420!1.38e-09!18;CL:0002419!1.38e-09!18;CL:0000790!1.38e-09!18;CL:0000624!2.79e-09!6;CL:0000084!3.59e-07!25;CL:0000827!3.59e-07!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.03e-15;82!UBERON:0006215;1.50e-12;3!UBERON:0010122;5.96e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.55e-53!57;UBERON:0005068!3.55e-53!57;UBERON:0006241!3.55e-53!57;UBERON:0007135!3.55e-53!57;UBERON:0002616!5.69e-44!59;UBERON:0002780!5.97e-44!41;UBERON:0001890!5.97e-44!41;UBERON:0006240!5.97e-44!41;UBERON:0003080!1.25e-42!42;UBERON:0007023!3.09e-42!115;UBERON:0001017!2.41e-41!82;UBERON:0000955!2.75e-41!69;UBERON:0006238!2.75e-41!69;UBERON:0005743!2.74e-40!86;UBERON:0001869!4.05e-40!32;UBERON:0001893!5.63e-40!34;UBERON:0002020!6.30e-40!34;UBERON:0003528!6.30e-40!34;UBERON:0002791!2.24e-38!33;UBERON:0000073!4.79e-38!94;UBERON:0001016!4.79e-38!94;UBERON:0003075!8.17e-35!86;UBERON:0007284!8.17e-35!86;UBERON:0002619!1.95e-34!22;UBERON:0002346!1.49e-32!90;UBERON:0001950!3.20e-31!20;UBERON:0000956!1.54e-29!25;UBERON:0000203!1.54e-29!25;UBERON:0003056!2.66e-27!61;UBERON:0000153!5.45e-21!129;UBERON:0007811!5.45e-21!129;UBERON:0000033!9.26e-21!123;UBERON:0004121!4.50e-17!169;UBERON:0000924!2.68e-16!173;UBERON:0006601!2.68e-16!173;UBERON:0002420!4.65e-12!9;UBERON:0007245!4.65e-12!9;UBERON:0010009!4.65e-12!9;UBERON:0010011!4.65e-12!9;UBERON:0000454!4.65e-12!9;UBERON:0002308!1.07e-11!9;UBERON:0000125!1.07e-11!9;UBERON:0003076!1.65e-11!15;UBERON:0003057!1.65e-11!15;UBERON:0000200!4.64e-11!6;UBERON:0001871!4.79e-11!7;UBERON:0000349!8.78e-10!5;UBERON:0004732!2.06e-09!13;UBERON:0001872!2.52e-09!5;UBERON:0002021!2.60e-09!5;UBERON:0009663!6.82e-09!7;UBERON:0004733!3.49e-08!12;UBERON:0002028!3.49e-08!12;UBERON:0007277!3.49e-08!12;UBERON:0000369!4.36e-08!4;UBERON:0002435!4.36e-08!4;UBERON:0000204!4.36e-08!4;UBERON:0010082!4.36e-08!4;UBERON:0000025!6.40e-08!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.80e-79;22!UBERON:0001869;1.14e-73;32!UBERON:0003528;5.63e-72;34!UBERON:0002020;5.63e-72;34!UBERON:0001950;6.62e-72;20!UBERON:0000956;1.21e-69;25!UBERON:0000203;1.21e-69;25!UBERON:0002791;9.04e-69;32!UBERON:0001893;1.32e-67;34!UBERON:0002780;4.71e-52;41!UBERON:0001890;4.71e-52;41!UBERON:0000073;5.78e-47;53!UBERON:0002616;5.78e-47;53!UBERON:0000955;2.33e-37;68!UBERON:0001017;3.18e-30;75!UBERON:0001016;1.04e-24;83!UBERON:0000200;1.10e-23;6!UBERON:0001871;6.55e-21;6!UBERON:0000349;9.16e-21;5!UBERON:0002021;1.16e-19;5!UBERON:0001872;1.36e-19;5!UBERON:0004732;2.78e-17;13!UBERON:0000369;8.00e-17;4!UBERON:0002435;8.00e-17;4!UBERON:0000204;8.00e-17;4!UBERON:0002420;4.00e-16;9!UBERON:0007245;4.00e-16;9!UBERON:0010009;4.00e-16;9!UBERON:0010011;4.00e-16;9!UBERON:0000454;4.00e-16;9!UBERON:0000125;2.42e-15;9!UBERON:0002308;2.42e-15;9!UBERON:0002680;1.07e-14;9!UBERON:0001895;1.07e-14;9!UBERON:0004733;1.51e-14;12!UBERON:0002028;1.51e-14;12!UBERON:0007023;9.44e-14;114!UBERON:0005383;6.78e-13;3!UBERON:0005382;6.78e-13;3!UBERON:0001870;9.90e-13;3!UBERON:0000988;1.54e-11;3!UBERON:0002298;6.39e-10;6!UBERON:0009663;1.24e-09;7!UBERON:0011216;1.39e-09;132!UBERON:0001876;1.92e-09;2!UBERON:0002771;3.92e-09;2!UBERON:0001954;4.08e-09;2!UBERON:0003022;4.08e-09;2!UBERON:0002421;4.08e-09;2!UBERON:0002600;4.08e-09;2!UBERON:0001873;5.96e-09;2!UBERON:0002702;8.68e-09;2!UBERON:0002148;2.99e-08;2!UBERON:0006331;2.99e-08;2!UBERON:0009662;2.99e-08;2!UBERON:0010314;1.92e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.77e-87,53;UBERON:0002616,3.77e-87,53;UBERON:0003528,2.84e-83,34;UBERON:0002020,2.84e-83,34;UBERON:0001869,7.23e-83,32;UBERON:0001049,4.10e-82,56;UBERON:0005068,4.10e-82,56;UBERON:0006241,4.10e-82,56;UBERON:0007135,4.10e-82,56;UBERON:0002619,1.62e-79,22;UBERON:0000955,4.66e-78,68;UBERON:0006238,4.66e-78,68;UBERON:0001893,9.76e-78,34;UBERON:0002791,1.57e-76,32;UBERON:0002780,1.59e-73,41;UBERON:0001890,1.59e-73,41;UBERON:0003080,1.59e-73,41;UBERON:0006240,1.59e-73,41;UBERON:0001950,6.42e-72,20;UBERON:0001017,9.82e-72,81;UBERON:0000956,1.10e-69,25;UBERON:0000203,1.10e-69,25;UBERON:0001016,3.69e-67,89;UBERON:0003075,6.39e-57,82;UBERON:0007284,6.39e-57,82;UBERON:0002346,6.66e-54,86;UBERON:0003056,6.78e-51,61;UBERON:0010371,9.81e-46,104;UBERON:0007023,2.23e-39,114;UBERON:0010314,2.08e-34,132;UBERON:0004121,7.62e-33,171;UBERON:0000924,7.62e-33,171;UBERON:0006601,7.62e-33,171;UBERON:0011216,1.66e-24,223;UBERON:0000200,9.64e-24,6;UBERON:0001871,8.05e-21,6;UBERON:0000349,9.36e-21,5;UBERON:0001872,1.10e-19,5;UBERON:0002021,1.19e-19,5;UBERON:0000025,3.09e-18,192;UBERON:0004732,2.52e-17,13;UBERON:0000369,8.51e-17,4;UBERON:0002435,8.51e-17,4;UBERON:0000204,8.51e-17,4;UBERON:0010082,8.51e-17,4;UBERON:0002420,4.57e-16,9;UBERON:0007245,4.57e-16,9;UBERON:0010009,4.57e-16,9;UBERON:0010011,4.57e-16,9;UBERON:0000454,4.57e-16,9;UBERON:0000125,2.05e-15,9;UBERON:0002308,2.05e-15,9;UBERON:0002680,1.11e-14,9;UBERON:0001895,1.11e-14,9;UBERON:0010092,1.11e-14,9;UBERON:0004733,1.40e-14,12;UBERON:0002028,1.40e-14,12;UBERON:0007277,1.40e-14,12;UBERON:0004111,6.17e-13,240;UBERON:0005383,7.50e-13,3;UBERON:0005382,7.50e-13,3;UBERON:0001870,9.16e-13,3;UBERON:0000988,1.43e-11,3;UBERON:0003076,1.78e-11,15;UBERON:0003057,1.78e-11,15;UBERON:0002298,5.39e-10,6;UBERON:0000483,7.03e-10,306;UBERON:0000119,1.06e-09,309;UBERON:0009663,1.28e-09,7;UBERON:0001876,2.22e-09,2;UBERON:0001954,3.76e-09,2;UBERON:0003022,3.76e-09,2;UBERON:0002421,3.76e-09,2;UBERON:0002600,3.76e-09,2;UBERON:0002771,4.08e-09,2;UBERON:0001873,6.33e-09,2;UBERON:0010122,6.33e-09,2;UBERON:0002702,8.03e-09,2;UBERON:0002148,2.20e-08,2;UBERON:0006331,2.20e-08,2;UBERON:0009662,2.20e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.180258620683,1.96505381374582,0.616804496998528,0.501559486172034,0.977766799900771,0.473447805734733,3.89653456815823,0.111410456885174,0.294605907474837,0,1.62482318259009,0.384273959177026,0.780356085359269,0,0,0,0.296573126324121,0,1.04535523804977,0,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0,0,0.579297615531196,0,0,0.12786256184353,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.646882724578552,0.128343036279748,0,0,0,1.00509759200609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,13.9180670687282,5.06409899077846,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,5.81599647657131,6.95760736213884,11.9768278800717,0,0,0,0,0,0,0,0.291604613383254,0,3.54296554325536,5.78862905401958,7.62908681585416,2.87506075821184,3.25102380848902,5.92340572315726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.876214728748802,0,3.04543779442941,0,0,0,0,0,5.50930970934882,0,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0,0,0.0821154570532092,0.0969890164884194,0.264768380074501,1.12990370390266,0,0,8.29371427022011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95229689809303,3.67749196501254,0,0,0,0,0,10.2666750752062,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,1.80996138906171,1.45455861916959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,6.10131324509816,3.755727921195,0,0.998361463831671,1.67660287941735,0,0,0,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00949464840019,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,8.99209151350433,2.8339315265117,1.27707087245721,7.99953820538945,3.52900374710405,7.81476952845662,7.10492840780145,1.42769420259154,0,0,0,0,0,0,0,0.451261970095544,0.20170506870352,0,0,0,0,5.87576986180033,3.90539049306924,2.89361515101658,5.83425453783943,2.18789923607288,0,0,0,0,1.07140367175657,0.336283722218824,0,0,0,0.691403925334676,0,1.01954599465248,6.24841348847066,0.118193840883968,0,0,8.1700106756321,0,0.913158720509496,0.431855182437243,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0.118920090777569,0,0,0.905777061400041,0,0,0,0,0,0.588925401344836,0.594092800654172,0.4226557275834,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,9.04286819539166,5.23620828408453,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0.829169439458779,0.827463966895162,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.180258620683,1.96505381374582,0.616804496998528,0.501559486172034,0.977766799900771,0.473447805734733,3.89653456815823,0.111410456885174,0.294605907474837,0,1.62482318259009,0.384273959177026,0.780356085359269,0,0,0,0.296573126324121,0,1.04535523804977,0,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0,0,0.579297615531196,0,0,0.12786256184353,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.646882724578552,0.128343036279748,0,0,0,1.00509759200609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,13.9180670687282,5.06409899077846,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,5.81599647657131,6.95760736213884,11.9768278800717,0,0,0,0,0,0,0,0.291604613383254,0,3.54296554325536,5.78862905401958,7.62908681585416,2.87506075821184,3.25102380848902,5.92340572315726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.876214728748802,0,3.04543779442941,0,0,0,0,0,5.50930970934882,0,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0,0,0.0821154570532092,0.0969890164884194,0.264768380074501,1.12990370390266,0,0,8.29371427022011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95229689809303,3.67749196501254,0,0,0,0,0,10.2666750752062,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,1.80996138906171,1.45455861916959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,6.10131324509816,3.755727921195,0,0.998361463831671,1.67660287941735,0,0,0,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00949464840019,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,8.99209151350433,2.8339315265117,1.27707087245721,7.99953820538945,3.52900374710405,7.81476952845662,7.10492840780145,1.42769420259154,0,0,0,0,0,0,0,0.451261970095544,0.20170506870352,0,0,0,0,5.87576986180033,3.90539049306924,2.89361515101658,5.83425453783943,2.18789923607288,0,0,0,0,1.07140367175657,0.336283722218824,0,0,0,0.691403925334676,0,1.01954599465248,6.24841348847066,0.118193840883968,0,0,8.1700106756321,0,0.913158720509496,0.431855182437243,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0.118920090777569,0,0,0.905777061400041,0,0,0,0,0,0.588925401344836,0.594092800654172,0.4226557275834,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,9.04286819539166,5.23620828408453,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0.829169439458779,0.827463966895162,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@HPCAL4 | |||
}} | }} |
Latest revision as of 00:17, 18 September 2015
Short description: | p2@HPCAL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HPCAL4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -30bp_to_NM_016257, uc001cdr.2, uc010oix.1_5end |
EntrezGene: | HPCAL4 |
HGNC: | 18212 |
UniProt: | Q9UM19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data