FFCP PHASE1:Hg19::chr11:64570425..64570446,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5871 | |EntrezGene=5871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6864 | |HGNC=6864 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=35bp_to_ENST00000482314_5end | |association_with_transcript=35bp_to_ENST00000482314_5end | ||
|cluster_id=chr11:64570425..64570446,- | |||
|description=CAGE_peak_2_at_MAP4K2_5end | |description=CAGE_peak_2_at_MAP4K2_5end | ||
|id=chr11:64570425..64570446,- | |id=chr11:64570425..64570446,- | ||
|ontology_enrichment_celltype=CL:0000542!2.99e-16!53;CL:0000051!2.99e-16!53;CL:0000838!9.65e-16!52;CL:0000945!1.51e-11!24;CL:0000826!1.51e-11!24;CL:0000988!2.53e-11!182;CL:0000037!1.39e-09!172;CL:0000566!1.39e-09!172;CL:0002087!8.97e-09!119;CL:0002032!2.33e-08!165;CL:0000837!2.33e-08!165;CL:0000738!8.62e-08!140;CL:0000115!3.29e-07!35 | |ontology_enrichment_celltype=CL:0000542!2.99e-16!53;CL:0000051!2.99e-16!53;CL:0000838!9.65e-16!52;CL:0000945!1.51e-11!24;CL:0000826!1.51e-11!24;CL:0000988!2.53e-11!182;CL:0000037!1.39e-09!172;CL:0000566!1.39e-09!172;CL:0002087!8.97e-09!119;CL:0002032!2.33e-08!165;CL:0000837!2.33e-08!165;CL:0000738!8.62e-08!140;CL:0000115!3.29e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.33e-13;24!CL:0000542;4.59e-11;53!CL:0000071;1.83e-10;18!CL:0002543;2.59e-09;6!CL:0000115;1.62e-07;36!CL:0002139;2.64e-07;24!CL:1000746;3.09e-07;7!CL:1000612;3.09e-07;7!CL:0002188;7.67e-07;5 | |ontology_enrichment_celltype_v019=CL:0000945;4.33e-13;24!CL:0000542;4.59e-11;53!CL:0000071;1.83e-10;18!CL:0002543;2.59e-09;6!CL:0000115;1.62e-07;36!CL:0002139;2.64e-07;24!CL:1000746;3.09e-07;7!CL:1000612;3.09e-07;7!CL:0002188;7.67e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.36e-19,53;CL:0000051,4.36e-19,53;CL:0000838,6.34e-18,52;CL:0000945,3.10e-13,24;CL:0000826,3.10e-13,24;CL:0000988,1.06e-11,177;CL:0000071,2.32e-10,18;CL:0002546,2.32e-10,18;CL:0000037,8.12e-10,168;CL:0002543,3.51e-09,6;CL:0002032,3.66e-09,161;CL:0000837,3.66e-09,161;CL:0000115,1.89e-08,36;CL:0002139,3.12e-07,24;CL:0000236,3.37e-07,14;CL:0002078,3.93e-07,45;CL:1000746,5.34e-07,7;CL:1000612,5.34e-07,7;CL:0002188,8.47e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000051;4.59e-11;53!CL:0002546;1.83e-10;18 | |ontology_enrichment_development_v019=CL:0000051;4.59e-11;53!CL:0002546;1.83e-10;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1240;2.20e-07;39 | |ontology_enrichment_disease_v019=DOID:1240;2.20e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,1.27e-07,39;DOID:2531,6.80e-07,51;DOID:0060083,6.80e-07,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.83e-10;18!UBERON:0001986;1.83e-10;18!UBERON:0004852;1.83e-10;18!UBERON:0000487;3.66e-08;22!UBERON:0002390;1.02e-07;32!UBERON:0000074;3.09e-07;7!UBERON:0001229;3.09e-07;7!UBERON:0006914;6.26e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0004638;1.83e-10;18!UBERON:0001986;1.83e-10;18!UBERON:0004852;1.83e-10;18!UBERON:0000487;3.66e-08;22!UBERON:0002390;1.02e-07;32!UBERON:0000074;3.09e-07;7!UBERON:0001229;3.09e-07;7!UBERON:0006914;6.26e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.32e-10,18;UBERON:0001986,2.32e-10,18;UBERON:0004852,2.32e-10,18;UBERON:0000487,4.42e-08,22;UBERON:0010532,5.34e-07,7;UBERON:0000074,5.34e-07,7;UBERON:0001229,5.34e-07,7;UBERON:0001230,5.34e-07,7;UBERON:0003220,5.34e-07,7;UBERON:0005749,5.34e-07,7;UBERON:0004199,5.34e-07,7;UBERON:0004209,5.34e-07,7;UBERON:0004198,5.34e-07,7;UBERON:0006914,7.35e-07,25 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.982935746006035,1.39560233594486,0,0.527533956456907,0.247532705920093,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0.369363174230364,0.612002073732759,0.626909442956176,0.286235987131057,0.273748850145768,0.251085279189606,2.44522898393444,2.13461532569859,3.46327437780189,0.786728553697808,0,0.309632246632152,0,0,0,0.92960640696362,0.853015394924529,2.64240395401362,0.553995408531877,0.401088894940283,0.217010870715852,0.223915474239924,0.971680998056939,0,0.145398238779565,0,0.727752183563449,0.232429036905685,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0,0,0.306083892370903,0,1.27867425159808,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0,0.285012743741249,0.19891667719909,0,1.75996244461323,1.63841583378639,2.66852776159066,0,0.800791974072025,2.29900975981793,0.661044872784862,1.90810750907073,2.27685187643779,0.587237189370939,0.764546456250458,0,1.12101712596307,1.31692042387539,0.196709770113833,1.57204305099666,1.02800749499755,2.34061093546949,0.32592226663359,1.4203434172042,1.94826728407911,1.78256731016278,0.883817722424512,1.32920336750173,0.541607727530031,1.92136979588513,1.95089021339817,2.30213066445147,1.93445012450094,3.18783394308558,1.33457906845854,0.802622484269139,2.09071047609954,1.35971211237079,1.53288197440768,2.74901956386104,1.26509846009751,0.637130828648193,1.95325036156926,0.950452044448374,1.35517607169996,0.127986611154418,0,1.89421801635213,0,0.403213486449465,0.534880391567015,0.724122019413995,0,0,0,0,0,0,0,0,0.378139268656271,0.886917589850256,0.175669571386252,0.261958150995425,0.364295288292542,0,0.649094787309367,0.174129737299267,0.664789802594326,0.715471872916026,0.571994910780128,1.11437250398869,1.39133685156694,0,1.38856200643038,0,2.09749718104953,0.825354125820202,0.208994966536811,0.516833518338658,0.35576626268671,0.33472061276467,0.805658634218294,0.760272105718513,1.46437234528902,0,2.43042584364528,0.982297011124877,2.02076435363553,1.23872628531654,4.5994991239765,1.89853131913626,1.28241220751285,1.31780417436063,0,0,0,0.25326102332916,0,0,0,0,2.1349799145941,0.24666754841716,0.311211035399766,0.404132016209064,0.326923806226917,0.908144565869588,0,0.70296429550139,0,0,0,0.117434498643765,0.485618833104395,0.140450806702248,0.408308342509787,0.61417158655884,0.413303124703062,0,0.494533858557114,0,0,0,0.375355559615893,0,0,0,0,0.226864366320042,0.179389635688862,0.213557388818567,0,0.300091096084402,0.206105058476878,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.276149695926898,0,0,0,0.339121184620975,0.193260853163297,0.545492241181669,0,0.365921118388786,0.265059536642971,0.580969714347592,0.414644220061482,0.252320850875628,0.36497735907583,0,1.92972281457866,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.329250856225877,0,0.301586917234893,0.277765335475589,0.325808305310325,0,0,0.34779121492523,0.234817388471643,0.577465791044295,0.462985512576611,0,0,0,0.492434012174795,0.702012795417713,0.297262324577456,0.93733833986777,0.16798212819886,0,0.179117045405697,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0.205654985406647,0,0.285826432630578,0.336393253036082,0,0.36669142910475,0.129271715757778,3.57656445851882,0,0,0,0.514414748524284,0,1.3321108950805,0.142977993658148,0,0.823240336780769,0,0,0,0.301439377059586,0,0.499864955910285,0,0.502257091432126,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,1.02674429023799,0,0,0.773288812777695,0,0,0,0,0.828831026872071,0.24538298343828,0,0,0.623912584592421,0,0,0,0.300946099727719,0,0,0,0.553107505625109,0.173767228936166,2.15381273209015,0.686286847621712,0.82707210449155,0.431428401637234,0.74709290462411,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.410635780069046,0,0.348631135379878,0,0,0,0,0,0.131124414959424,0.451199612907412,0.308061348417659,0.784349769176855,0,0.211103257785751,1.13733384070897,0.850468526382578,1.51141141271498,1.54227252690289,0.812839312631559,1.00337954770971,0.509752546090077,0,1.34324852833307,0,0,0,0.656029291399411,0.325378394664303,0,0,0,0,0,0,0.386682873168488,0.308097234229289,0,0.275673144969061,0.429680979473094,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0.55597265731176,0,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0.636406495851874,0.78494864019923,0.359744915166629,0,0.471249609382746,0.404364963146632,0,0.421258456238981,0.975267478179181,0,0,0.545999645631943,0.141405431953713,0,0.551365343546124,0,0,0.578775534266688,0,0,0.6196469961995,0,0.286822704408103,0.196498082026242,0,0,0,0,0.379473173765715,0.699869440489966,0.192444225451024,0,0,0.376575203107117,0,0,0,0,0,0,2.84823593587081,0.952927101831156,1.23408681925858,1.2969466223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| ||
|short_description=p2@MAP4K2 | |short_description=p2@MAP4K2 | ||
}} | }} |
Latest revision as of 04:39, 19 September 2015
Short description: | p2@MAP4K2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MAP4K2_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000482314_5end |
EntrezGene: | MAP4K2 |
HGNC: | 6864 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.36e-19 | 53 |
common lymphoid progenitor | 4.36e-19 | 53 |
lymphoid lineage restricted progenitor cell | 6.34e-18 | 52 |
lymphocyte of B lineage | 3.10e-13 | 24 |
pro-B cell | 3.10e-13 | 24 |
hematopoietic cell | 1.06e-11 | 177 |
blood vessel endothelial cell | 2.32e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.32e-10 | 18 |
hematopoietic stem cell | 8.12e-10 | 168 |
vein endothelial cell | 3.51e-09 | 6 |
hematopoietic oligopotent progenitor cell | 3.66e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.66e-09 | 161 |
endothelial cell | 1.89e-08 | 36 |
endothelial cell of vascular tree | 3.12e-07 | 24 |
B cell | 3.37e-07 | 14 |
meso-epithelial cell | 3.93e-07 | 45 |
glomerular cell | 5.34e-07 | 7 |
kidney corpuscule cell | 5.34e-07 | 7 |
glomerular endothelial cell | 8.47e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.32e-10 | 18 |
endothelium | 2.32e-10 | 18 |
cardiovascular system endothelium | 2.32e-10 | 18 |
simple squamous epithelium | 4.42e-08 | 22 |
primitive nephron | 5.34e-07 | 7 |
renal glomerulus | 5.34e-07 | 7 |
renal corpuscle | 5.34e-07 | 7 |
glomerular capsule | 5.34e-07 | 7 |
metanephric mesenchyme | 5.34e-07 | 7 |
glomerular tuft | 5.34e-07 | 7 |
S-shaped body | 5.34e-07 | 7 |
renal vesicle | 5.34e-07 | 7 |
comma-shaped body | 5.34e-07 | 7 |
squamous epithelium | 7.35e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.27e-07 | 39 |
hematologic cancer | 6.80e-07 | 51 |
immune system cancer | 6.80e-07 | 51 |