FFCP PHASE1:Hg19::chr6:10412576..10412599,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7020 | |EntrezGene=7020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |HGNC=11742 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N1C6,P05549 | |UniProt=Q8N1C6,P05549 | ||
|association_with_transcript=7bp_to_ENST00000379608,NM_001032280,uc003myq.2,uc003myv.1_5end | |association_with_transcript=7bp_to_ENST00000379608,NM_001032280,uc003myq.2,uc003myv.1_5end | ||
|cluster_id=chr6:10412576..10412599,- | |||
|coexpression_cluster_id=C2835 | |coexpression_cluster_id=C2835 | ||
|description=CAGE_peak_5_at_TFAP2A_5end | |description=CAGE_peak_5_at_TFAP2A_5end | ||
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|ontology_enrichment_celltype=CL:0000066!2.05e-42!254;CL:0002077!1.55e-14!33;CL:0000076!4.14e-12!62;CL:0002076!6.99e-12!43;CL:0000220!1.56e-10!246;CL:0002321!2.10e-10!248;CL:0000710!1.84e-08!20;CL:0000221!2.56e-08!71;CL:0000075!5.06e-08!27;CL:0000077!8.74e-08!19;CL:0000223!1.02e-07!59;CL:0002159!1.24e-07!13;CL:0000150!6.38e-07!9 | |ontology_enrichment_celltype=CL:0000066!2.05e-42!254;CL:0002077!1.55e-14!33;CL:0000076!4.14e-12!62;CL:0002076!6.99e-12!43;CL:0000220!1.56e-10!246;CL:0002321!2.10e-10!248;CL:0000710!1.84e-08!20;CL:0000221!2.56e-08!71;CL:0000075!5.06e-08!27;CL:0000077!8.74e-08!19;CL:0000223!1.02e-07!59;CL:0002159!1.24e-07!13;CL:0000150!6.38e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;7.52e-12;42!CL:0002077;9.56e-12;34!CL:0000150;2.99e-08;9!CL:0000077;3.33e-08;19!CL:0002368;9.18e-08;13!CL:0002251;1.51e-07;20!CL:0002159;1.81e-07;14!CL:0000710;1.91e-07;20!CL:0000349;8.36e-07;19 | |ontology_enrichment_celltype_v019=CL:0002076;7.52e-12;42!CL:0002077;9.56e-12;34!CL:0000150;2.99e-08;9!CL:0000077;3.33e-08;19!CL:0002368;9.18e-08;13!CL:0002251;1.51e-07;20!CL:0002159;1.81e-07;14!CL:0000710;1.91e-07;20!CL:0000349;8.36e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.07e-46,253;CL:0002076,1.55e-15,42;CL:0002077,1.53e-13,34;CL:0000076,2.32e-12,63;CL:0000223,2.85e-10,58;CL:0002321,1.38e-09,250;CL:0000150,1.86e-08,9;CL:0000077,2.89e-08,19;CL:0002159,1.28e-07,14;CL:0002368,1.34e-07,13;CL:0000710,1.67e-07,20;CL:0002251,1.78e-07,20;CL:0000221,7.16e-07,72;CL:0000349,7.30e-07,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!6.98e-24!143;DOID:305!1.05e-19!106;DOID:14566!8.64e-15!239;DOID:162!8.73e-15!235 | |ontology_enrichment_disease=DOID:0050687!6.98e-24!143;DOID:305!1.05e-19!106;DOID:14566!8.64e-15!239;DOID:162!8.73e-15!235 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.98e-23,143;DOID:305,2.33e-20,106;DOID:162,5.61e-13,235;DOID:14566,1.37e-12,239 | |||
|ontology_enrichment_uberon=UBERON:0001004!7.90e-12!72;UBERON:0003102!3.45e-11!95;UBERON:0004119!1.94e-10!169;UBERON:0000925!1.94e-10!169;UBERON:0006595!1.94e-10!169;UBERON:0000065!1.70e-08!53;UBERON:0005631!1.98e-08!14;UBERON:0000158!1.98e-08!14;UBERON:0008947!2.29e-08!38;UBERON:0003258!2.29e-08!38;UBERON:0002097!3.07e-08!40;UBERON:0001003!1.02e-07!14;UBERON:0007376!1.02e-07!14;UBERON:0007383!1.02e-07!14;UBERON:0001737!4.32e-07!9;UBERON:0000072!5.50e-07!46;UBERON:0000077!5.72e-07!130 | |ontology_enrichment_uberon=UBERON:0001004!7.90e-12!72;UBERON:0003102!3.45e-11!95;UBERON:0004119!1.94e-10!169;UBERON:0000925!1.94e-10!169;UBERON:0006595!1.94e-10!169;UBERON:0000065!1.70e-08!53;UBERON:0005631!1.98e-08!14;UBERON:0000158!1.98e-08!14;UBERON:0008947!2.29e-08!38;UBERON:0003258!2.29e-08!38;UBERON:0002097!3.07e-08!40;UBERON:0001003!1.02e-07!14;UBERON:0007376!1.02e-07!14;UBERON:0007383!1.02e-07!14;UBERON:0001737!4.32e-07!9;UBERON:0000072!5.50e-07!46;UBERON:0000077!5.72e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.23e-08;9!UBERON:0001557;1.23e-08;9!UBERON:0000072;5.07e-08;37!UBERON:0000065;6.54e-08;44!UBERON:0001003;9.41e-08;15!UBERON:0007376;9.41e-08;15!UBERON:0005631;1.44e-07;10!UBERON:0000158;1.44e-07;10!UBERON:0002097;2.76e-07;41!UBERON:0000486;9.34e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.23e-08;9!UBERON:0001557;1.23e-08;9!UBERON:0000072;5.07e-08;37!UBERON:0000065;6.54e-08;44!UBERON:0001003;9.41e-08;15!UBERON:0007376;9.41e-08;15!UBERON:0005631;1.44e-07;10!UBERON:0000158;1.44e-07;10!UBERON:0002097;2.76e-07;41!UBERON:0000486;9.34e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.33e-13,99;UBERON:0001004,1.24e-11,74;UBERON:0005631,2.17e-10,14;UBERON:0000158,2.17e-10,14;UBERON:0004119,1.21e-09,160;UBERON:0000925,1.21e-09,160;UBERON:0006595,1.21e-09,160;UBERON:0002097,5.35e-09,41;UBERON:0000065,7.01e-09,54;UBERON:0001737,1.13e-08,9;UBERON:0008947,2.28e-08,38;UBERON:0003258,2.28e-08,38;UBERON:0001003,8.75e-08,15;UBERON:0007376,8.75e-08,15;UBERON:0007383,8.75e-08,15;UBERON:0000072,1.20e-07,47;UBERON:0002199,4.06e-07,46;UBERON:0002416,4.06e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,13.1064823278103,9.75937819445278,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,6.43594857135249,7.53014796945625,9.24385025416969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,1.00267582127178,0,0.795285947051099,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,12.750335090239,5.19098219898201,0,0,0,0,0,0,0.198762407366705,0.860234595106124,1.73570250803797,1.13061588384802,1.67799774483962,2.20094433552054,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,10.0301631992783,0,0.506522046658319,1.98613771219828,1.14734648299525,1.77334191099179,0,1.06748995729705,1.72667283892012,0,0.404132016209064,0.163461903113459,0,0,1.17160715916898,0,0,0,0,0,0,0.204154171254893,1.59684612505298,0.206651562351531,0,0,0,0,1.5150250255866,1.37630371859161,1.10825646193673,0,0,0,0.113432183160021,1.4351170855109,1.2813443329114,1.48352330811693,5.40163972951924,1.33968288009971,1.54584324027377,1.11670113798954,3.37552664482532,3.41029518064195,1.7670364197088,1.65689817556139,5.81925804547723,1.06502877754984,0.906768884048762,2.88253006927829,6.3776081543888,6.81865301477087,7.4569194801141,0.365921118388786,0,0.232387885739037,2.69518743039963,0.252320850875628,0,1.56449532329816,3.21620469096443,1.38134921352481,0.464367928031979,0,8.6363964029086,7.58631105351458,7.71235295627142,8.93381179132391,7.84365998732662,7.35538919244399,6.87639671616838,6.08286541888573,6.54070166808864,0,0,0,0,0,0,0,0,0,0.343135620597051,8.9995234035073,6.74410519545717,3.61904300681871,8.33296006426766,0.651616610620649,0,0,0.115930404975077,0,0,0,0,2.37061319387782,2.57545848628462,0,0,0,2.81201501960331,3.86358894857377,3.96970272278682,4.56748465784526,4.94077695473735,3.4504441124869,0,0.088048434013226,0.207328115540772,0,0,19.3033598648194,19.4814097034722,22.2713149699089,11.9750712215894,24.472943263391,15.9181820657276,36.585783376714,0.336393253036082,0,0.1466765716419,2.58543431515556,0,0,2.92531928243358,6.24044621468197,0,0,0,0,0,0,0,0,0,0.904318131178758,2.61460037580088,0.299918973546171,0,0,0,1.4377491329495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.40724239980099,8.56459146226377,10.8814666373415,11.831282914264,0,0,0,0.664225598535437,0.184369168541703,3.38846096425523,0.195801157462741,0,0,0,0,2.42502057157008,6.65741758041988,6.95497674658265,0,0,0,0,0,0,0,0,0.177561725313127,0,0.519254429183621,0,0,6.01519410909855,8.10312702635888,0.114814448164607,0,0,2.25599806453706,4.54390488916047,0.784349769176855,0,2.42768746453614,0,0,0.215915916102139,0,0,0,1.78413391131527,3.3243040357149,0.895499018888713,0,0,0,0,0.325378394664303,9.58281408323817,0.366277859273374,0.082509499920588,5.74265537996172,7.80072295243825,0,0,0,0,0,0,0,0,0,7.76839102196597,9.03293316615999,8.42243902464255,12.138933702666,1.85938219718914,1.88887408098384,0,0.616067160352178,0.532306030317022,1.73986598415015,1.66791797193528,0.286249773483982,0,0,0,0,0,1.59101623962968,0.78494864019923,0,0,0,1.2130948894399,1.58510321173008,0.842516912477962,0,0,0,0,0,0,8.27048015319186,4.64407282668854,3.5076070820301,0,0.655894752046633,0,0.6196469961995,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0,3.03578539012572,0,9.04487859619813,7.37332503089366,4.3556393944529,6.87249745670488,5.59656984472599,13.47771805341,10.6423236848802,8.72948920786446,0,0,0,0,0,0,0,0,0.961416640147258,2.88743956579008,2.94048259177238,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,1.4452926759333,0.605399121573143,0,0,0,0,0,0,0,0,0,0,12.6888304579065,1.12284324244932,0,0.36408156524854,0,0,2.62618933211459,5.3453642549875,3.07160702099232,0,0,2.44879151050393,0,0,0.796991953004279,0,3.52705846995986,0.715880777515084,0,4.3545542272653,1.16828856491525,0.358042349351218,0,0.493217028184668,0,2.22273980289274,0,0,0,6.77112178821606,9.35821999959294,2.89999830173917,0.227586896570999,1.01701460117107,7.32801813480603,0.689486746482929,2.33283690706603,2.08349993919951,0,0,0,0.774054819518572,1.47773809476774,0,17.2122772360004,0.975966209950223,0.230850775511391,1.82307289355202,0,0,0,5.42301971544263,1.64875668123352,9.59462596833542,0,0,0.166211681900156,0,0,0,0,0,2.3209787098083,1.46909527343233,0,0,0,0.0884575645033392,3.66618086960175,0.593042257361244,0.123563938946503,0.313265848516366,0,0,0,0,0.782658475728359,6.06950948835232,2.36750641709634,0,0,0.063186579628488,0.60129367765797,3.83646308169814,3.98792323624311,4.63388738225698,2.5114633472578,4.77889719091835,3.41531455235751,3.32819215231533,0.867798691675654,6.36950583193455,8.09650621197744,4.36816670605075,1.20390222730132,6.4826741963687,9.20925395285938,5.50173562256502,2.61870344518732,0,4.51961481561065,0.137041924646751,0.794858446811959,0,2.73771935828724,7.3746114631411,0.640358984218058,7.99238438328521,1.1527233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| ||
|short_description=p5@TFAP2A | |short_description=p5@TFAP2A | ||
}} | }} |
Latest revision as of 12:50, 19 September 2015
Short description: | p5@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TFAP2A_5end |
Coexpression cluster: | C2835_Melanocyte_myxofibrosarcoma_placenta_cervical_Corneal_breast_salivary |
Association with transcript: | 7bp_to_ENST00000379608, NM_001032280, uc003myq.2, uc003myv.1_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | Q8N1C6P05549 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.07e-46 | 253 |
endo-epithelial cell | 1.55e-15 | 42 |
ecto-epithelial cell | 1.53e-13 | 34 |
squamous epithelial cell | 2.32e-12 | 63 |
endodermal cell | 2.85e-10 | 58 |
embryonic cell | 1.38e-09 | 250 |
glandular epithelial cell | 1.86e-08 | 9 |
mesothelial cell | 2.89e-08 | 19 |
general ecto-epithelial cell | 1.28e-07 | 14 |
respiratory epithelial cell | 1.34e-07 | 13 |
neurecto-epithelial cell | 1.67e-07 | 20 |
epithelial cell of alimentary canal | 1.78e-07 | 20 |
ectodermal cell | 7.16e-07 | 72 |
extraembryonic cell | 7.30e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.33e-13 | 99 |
respiratory system | 1.24e-11 | 74 |
extraembryonic membrane | 2.17e-10 | 14 |
membranous layer | 2.17e-10 | 14 |
endoderm-derived structure | 1.21e-09 | 160 |
endoderm | 1.21e-09 | 160 |
presumptive endoderm | 1.21e-09 | 160 |
skin of body | 5.35e-09 | 41 |
respiratory tract | 7.01e-09 | 54 |
larynx | 1.13e-08 | 9 |
respiratory primordium | 2.28e-08 | 38 |
endoderm of foregut | 2.28e-08 | 38 |
skin epidermis | 8.75e-08 | 15 |
outer epithelium | 8.75e-08 | 15 |
enveloping layer of ectoderm | 8.75e-08 | 15 |
segment of respiratory tract | 1.20e-07 | 47 |
integument | 4.06e-07 | 46 |
integumental system | 4.06e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.98e-23 | 143 |
carcinoma | 2.33e-20 | 106 |
cancer | 5.61e-13 | 235 |
disease of cellular proliferation | 1.37e-12 | 239 |