FFCP PHASE1:Hg19::chr17:59474831..59474844,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:59474831..59474844,+ | |||
|coexpression_cluster_id=C43 | |coexpression_cluster_id=C43 | ||
|description=CAGE_peak_at_chr17:59474831..59474844,+ | |description=CAGE_peak_at_chr17:59474831..59474844,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002598;3.70e-11;2 | |ontology_enrichment_celltype_v019=CL:0002598;3.70e-11;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002598,4.52e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.64e-40;2!UBERON:0005754;1.88e-21;1!UBERON:0003918;6.28e-09;10!UBERON:0007687;6.28e-09;10 | |ontology_enrichment_development_v019=UBERON:0007297;1.64e-40;2!UBERON:0005754;1.88e-21;1!UBERON:0003918;6.28e-09;10!UBERON:0007687;6.28e-09;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.23e-25!115;UBERON:0000481!1.14e-08!347;UBERON:0006947!2.27e-07!3;UBERON:0004054!2.27e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!1.23e-25!115;UBERON:0000481!1.14e-08!347;UBERON:0006947!2.27e-07!3;UBERON:0004054!2.27e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.64e-60;3!UBERON:0004054;3.64e-60;3!UBERON:0005904;2.29e-45;4!UBERON:0001000;1.53e-21;1!UBERON:0005352;1.53e-21;1!UBERON:0000998;1.88e-21;1!UBERON:0006868;1.88e-21;1!UBERON:0001301;6.31e-21;1!UBERON:0002171;6.31e-21;1!UBERON:0006518;6.31e-21;1!UBERON:0008949;6.31e-21;1!UBERON:0000101;6.31e-21;1!UBERON:0002167;6.31e-21;1!UBERON:0001052;6.33e-21;4!UBERON:0000058;1.21e-18;10!UBERON:0003135;5.12e-17;11!UBERON:0004907;5.91e-17;5!UBERON:0004175;3.17e-09;21!UBERON:0003101;7.82e-09;22!UBERON:0000079;7.82e-09;22!UBERON:0000059;3.14e-08;11 | |ontology_enrichment_uberon_v019=UBERON:0006947;3.64e-60;3!UBERON:0004054;3.64e-60;3!UBERON:0005904;2.29e-45;4!UBERON:0001000;1.53e-21;1!UBERON:0005352;1.53e-21;1!UBERON:0000998;1.88e-21;1!UBERON:0006868;1.88e-21;1!UBERON:0001301;6.31e-21;1!UBERON:0002171;6.31e-21;1!UBERON:0006518;6.31e-21;1!UBERON:0008949;6.31e-21;1!UBERON:0000101;6.31e-21;1!UBERON:0002167;6.31e-21;1!UBERON:0001052;6.33e-21;4!UBERON:0000058;1.21e-18;10!UBERON:0003135;5.12e-17;11!UBERON:0004907;5.91e-17;5!UBERON:0004175;3.17e-09;21!UBERON:0003101;7.82e-09;22!UBERON:0000079;7.82e-09;22!UBERON:0000059;3.14e-08;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.43e-60,3;UBERON:0004054,2.43e-60,3;UBERON:0005904,1.69e-45,4;UBERON:0001000,1.53e-21,1;UBERON:0005352,1.53e-21,1;UBERON:0000998,1.88e-21,1;UBERON:0006868,1.88e-21,1;UBERON:0001301,4.22e-21,1;UBERON:0002171,6.31e-21,1;UBERON:0006518,6.31e-21,1;UBERON:0008949,6.31e-21,1;UBERON:0000101,6.31e-21,1;UBERON:0002167,6.31e-21,1;UBERON:0001052,6.33e-21,4;UBERON:0003135,4.59e-17,11;UBERON:0004907,5.91e-17,5;UBERON:0000058,3.68e-10,19;UBERON:0000080,7.41e-10,9;UBERON:0002120,7.41e-10,9;UBERON:0004875,7.41e-10,9;UBERON:0005721,7.41e-10,9;UBERON:0005754,7.41e-10,9;UBERON:0007297,7.41e-10,9;UBERON:0003101,7.41e-09,22;UBERON:0000079,7.41e-09,22;UBERON:0000059,3.14e-08,11;UBERON:0004876,3.14e-08,11;UBERON:0004175,7.31e-08,25;UBERON:0003887,1.29e-07,12;UBERON:0002113,1.67e-07,26;UBERON:0003918,1.67e-07,26;UBERON:0011143,1.67e-07,26;UBERON:0005095,1.67e-07,26;UBERON:0007687,1.67e-07,26;UBERON:0005177,5.96e-07,101 | |||
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| ||
|short_description=p@chr17:59474831..59474844,+ | |short_description=p@chr17:59474831..59474844,+ | ||
}} | }} |
Latest revision as of 19:35, 25 July 2015
Short description: | p@chr17:59474831..59474844, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:59474831..59474844, + |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial smooth muscle cell | 4.52e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.43e-60 | 3 |
internal male genitalia | 2.43e-60 | 3 |
duct of male reproductive system | 1.69e-45 | 4 |
vas deferens | 1.53e-21 | 1 |
spermatic cord | 1.53e-21 | 1 |
seminal vesicle | 1.88e-21 | 1 |
seminal fluid secreting gland | 1.88e-21 | 1 |
epididymis | 4.22e-21 | 1 |
lower lobe of right lung | 6.31e-21 | 1 |
right lung lobe | 6.31e-21 | 1 |
lower lobe of lung | 6.31e-21 | 1 |
lobe of lung | 6.31e-21 | 1 |
right lung | 6.31e-21 | 1 |
rectum | 6.33e-21 | 4 |
male reproductive organ | 4.59e-17 | 11 |
lower digestive tract | 5.91e-17 | 5 |
duct | 3.68e-10 | 19 |
mesonephros | 7.41e-10 | 9 |
pronephros | 7.41e-10 | 9 |
nephrogenic cord | 7.41e-10 | 9 |
pronephric mesoderm | 7.41e-10 | 9 |
rostral part of nephrogenic cord | 7.41e-10 | 9 |
presumptive pronephric mesoderm | 7.41e-10 | 9 |
male organism | 7.41e-09 | 22 |
male reproductive system | 7.41e-09 | 22 |
large intestine | 3.14e-08 | 11 |
urogenital ridge | 3.14e-08 | 11 |
internal genitalia | 7.31e-08 | 25 |
intraembryonic coelom | 1.29e-07 | 12 |
kidney | 1.67e-07 | 26 |
kidney mesenchyme | 1.67e-07 | 26 |
upper urinary tract | 1.67e-07 | 26 |
kidney rudiment | 1.67e-07 | 26 |
kidney field | 1.67e-07 | 26 |
trunk region element | 5.96e-07 | 101 |