FFCP PHASE1:Hg19::chr3:137717571..137717591,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51208 | |EntrezGene=51208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2039 | |HGNC=2039 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000343735_5end | |association_with_transcript=0bp_to_ENST00000343735_5end | ||
|cluster_id=chr3:137717571..137717591,+ | |||
|coexpression_cluster_id=C238 | |coexpression_cluster_id=C238 | ||
|description=CAGE_peak_7_at_CLDN18_5end | |description=CAGE_peak_7_at_CLDN18_5end | ||
|id=chr3:137717571..137717591,+ | |id=chr3:137717571..137717591,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.38e-18!5;CL:0000148!1.83e-09!10;CL:0000541!1.83e-09!10;CL:0000147!6.70e-07!14 | |ontology_enrichment_celltype=CL:0002322!2.38e-18!5;CL:0000148!1.83e-09!10;CL:0000541!1.83e-09!10;CL:0000147!6.70e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.88e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.73e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.55e-21;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;2.88e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0002110!3.17e-14!3;UBERON:0006242!3.17e-14!3;UBERON:0005409!6.22e-13!35;UBERON:0000160!2.19e-12!27;UBERON:0001154!3.28e-11!1;UBERON:0001153!3.28e-11!1 | |ontology_enrichment_uberon=UBERON:0002110!3.17e-14!3;UBERON:0006242!3.17e-14!3;UBERON:0005409!6.22e-13!35;UBERON:0000160!2.19e-12!27;UBERON:0001154!3.28e-11!1;UBERON:0001153!3.28e-11!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.88e-11;2!UBERON:0004801;2.88e-11;2!UBERON:0005409;1.93e-08;22!UBERON:0002110;5.36e-08;3!UBERON:0002114;5.36e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.73e-11,2;UBERON:0004801,2.73e-11,2;UBERON:0002114,5.18e-08,2;UBERON:0002110,5.54e-08,3;UBERON:0006242,5.54e-08,3;UBERON:0005409,1.56e-07,25 | |||
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|short_description=p7@CLDN18 | |short_description=p7@CLDN18 | ||
}} | }} |
Latest revision as of 00:24, 25 September 2015
Short description: | p7@CLDN18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CLDN18_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 0bp_to_ENST00000343735_5end |
EntrezGene: | CLDN18 |
HGNC: | 2039 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.73e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.73e-11 | 2 |
cervix epithelium | 2.73e-11 | 2 |
duodenum | 5.18e-08 | 2 |
gallbladder | 5.54e-08 | 3 |
gall bladder primordium | 5.54e-08 | 3 |
gastrointestinal system | 1.56e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.02e-11 | 2 |