FFCP PHASE1:Hg19::chr2:21228790..21228817,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=-233bp_to_M12413_5end | |association_with_transcript=-233bp_to_M12413_5end | ||
|cluster_id=chr2:21228790..21228817,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_4_at_APOB_5end | |description=CAGE_peak_4_at_APOB_5end | ||
|id=chr2:21228790..21228817,- | |id=chr2:21228790..21228817,- | ||
|ontology_enrichment_celltype=CL:0000181!1.49e-39!12;CL:0000417!1.49e-39!12;CL:0000668!1.49e-39!12;CL:0000414!1.49e-39!12;CL:0000412!1.49e-39!12;CL:0000182!1.49e-39!12;CL:0000223!3.51e-16!59;CL:0002563!2.78e-08!4 | |ontology_enrichment_celltype=CL:0000181!1.49e-39!12;CL:0000417!1.49e-39!12;CL:0000668!1.49e-39!12;CL:0000414!1.49e-39!12;CL:0000412!1.49e-39!12;CL:0000182!1.49e-39!12;CL:0000223!3.51e-16!59;CL:0002563!2.78e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.09e-47;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.06e-47,12;CL:0000223,2.27e-15,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.74e-38;11!UBERON:0009497;3.58e-32;13!UBERON:0001041;8.55e-14;30!UBERON:0003104;2.17e-13;31!CL:0000223;4.05e-11;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@APOB | |short_description=p4@APOB | ||
}} | }} |
Latest revision as of 22:58, 19 September 2015
Short description: | p4@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -233bp_to_M12413_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.06e-47 | 12 |
endodermal cell | 2.27e-15 | 58 |