FFCP PHASE1:Hg19::chr12:121418727..121418744,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=26785 | |HGNC=26785 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000537361_5end | |association_with_transcript=-18bp_to_ENST00000537361_5end | ||
|cluster_id=chr12:121418727..121418744,- | |||
|description=CAGE_peak_1_at_HNF1A-AS1_5end | |description=CAGE_peak_1_at_HNF1A-AS1_5end | ||
|id=chr12:121418727..121418744,- | |id=chr12:121418727..121418744,- | ||
|ontology_enrichment_celltype=CL:0000181!3.02e-14!12;CL:0000417!3.02e-14!12;CL:0000668!3.02e-14!12;CL:0000414!3.02e-14!12;CL:0000412!3.02e-14!12;CL:0000182!3.02e-14!12;CL:0000223!3.91e-07!59 | |ontology_enrichment_celltype=CL:0000181!3.02e-14!12;CL:0000417!3.02e-14!12;CL:0000668!3.02e-14!12;CL:0000414!3.02e-14!12;CL:0000412!3.02e-14!12;CL:0000182!3.02e-14!12;CL:0000223!3.91e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.40e-20;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.31e-20,12;CL:0000223,4.84e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;8.00e-24;13!UBERON:0004161;1.17e-22;11!UBERON:0003104;5.78e-16;31!UBERON:0001041;2.16e-11;30!CL:0000223;1.58e-07;58 | |||
|ontology_enrichment_disease=DOID:299!1.06e-10!25;DOID:305!6.67e-07!106 | |ontology_enrichment_disease=DOID:299!1.06e-10!25;DOID:305!6.67e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:299;1.87e-13;25!DOID:3493;8.33e-09;2!DOID:4468;3.07e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.83e-13,25;DOID:305,4.36e-10,106;DOID:3493,8.50e-09,2;DOID:4468,2.74e-08,2;DOID:0050687,3.61e-07,143 | |||
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| ||
|short_description=p1@HNF1A-AS1 | |short_description=p1@HNF1A-AS1 | ||
}} | }} |
Latest revision as of 21:09, 16 September 2015
Short description: | p1@HNF1A-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HNF1A-AS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000537361_5end |
EntrezGene: | NA |
HGNC: | 26785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.31e-20 | 12 |
endodermal cell | 4.84e-12 | 58 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.83e-13 | 25 |
carcinoma | 4.36e-10 | 106 |
signet ring cell adenocarcinoma | 8.50e-09 | 2 |
clear cell adenocarcinoma | 2.74e-08 | 2 |
cell type cancer | 3.61e-07 | 143 |