FFCP PHASE1:Hg19::chr14:24047965..24048079,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84502 | |EntrezGene=84502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20156 | |HGNC=20156 | ||
|TSSclassifier=strong | |||
|UniProt=Q96JJ6 | |UniProt=Q96JJ6 | ||
|association_with_transcript=0bp_to_ENST00000356300,ENST00000397118,NM_001146028,NM_032452,uc001wkq.2,uc001wkr.2,uc001wks.2_5end | |association_with_transcript=0bp_to_ENST00000356300,ENST00000397118,NM_001146028,NM_032452,uc001wkq.2,uc001wkr.2,uc001wks.2_5end | ||
|cluster_id=chr14:24047965..24048079,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_JPH4_5end | |description=CAGE_peak_1_at_JPH4_5end | ||
|id=chr14:24047965..24048079,- | |id=chr14:24047965..24048079,- | ||
|ontology_enrichment_celltype=CL:0000047!4.38e-08!8;CL:0000133!8.76e-07!59 | |ontology_enrichment_celltype=CL:0000047!4.38e-08!8;CL:0000133!8.76e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.50e-08;6!CL:0000404;2.50e-08;6!CL:0002321;1.68e-07;15!CL:0000333;3.07e-07;5!CL:0002322;8.83e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.32e-10,8;CL:0000540,2.41e-08,6;CL:0000031,2.41e-08,6;CL:0000404,2.41e-08,6;CL:0002322,8.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.28e-15;82!CL:0000031;2.50e-08;6 | |||
|ontology_enrichment_disease=DOID:171!3.22e-07!10 | |ontology_enrichment_disease=DOID:171!3.22e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;7.49e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,7.82e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.11e-59!94;UBERON:0001016!3.11e-59!94;UBERON:0001017!1.58e-57!82;UBERON:0005743!2.20e-55!86;UBERON:0001049!2.23e-53!57;UBERON:0005068!2.23e-53!57;UBERON:0006241!2.23e-53!57;UBERON:0007135!2.23e-53!57;UBERON:0007023!1.98e-51!115;UBERON:0000955!1.08e-45!69;UBERON:0006238!1.08e-45!69;UBERON:0002616!1.93e-44!59;UBERON:0003080!9.44e-42!42;UBERON:0002780!2.98e-41!41;UBERON:0001890!2.98e-41!41;UBERON:0006240!2.98e-41!41;UBERON:0002346!5.49e-41!90;UBERON:0003075!4.18e-38!86;UBERON:0007284!4.18e-38!86;UBERON:0002020!1.06e-34!34;UBERON:0003528!1.06e-34!34;UBERON:0001893!1.06e-34!34;UBERON:0000924!1.30e-34!173;UBERON:0006601!1.30e-34!173;UBERON:0002791!1.20e-33!33;UBERON:0001869!4.28e-33!32;UBERON:0004121!3.97e-32!169;UBERON:0003056!1.05e-28!61;UBERON:0002619!2.11e-26!22;UBERON:0000153!2.62e-26!129;UBERON:0007811!2.62e-26!129;UBERON:0000956!2.30e-25!25;UBERON:0000203!2.30e-25!25;UBERON:0000033!3.43e-25!123;UBERON:0001950!3.30e-24!20;UBERON:0003076!1.99e-12!15;UBERON:0003057!1.99e-12!15;UBERON:0002420!4.36e-11!9;UBERON:0007245!4.36e-11!9;UBERON:0010009!4.36e-11!9;UBERON:0010011!4.36e-11!9;UBERON:0000454!4.36e-11!9;UBERON:0002308!1.04e-10!9;UBERON:0000125!1.04e-10!9;UBERON:0004732!1.43e-10!13;UBERON:0001871!4.49e-10!7;UBERON:0004733!7.55e-10!12;UBERON:0002028!7.55e-10!12;UBERON:0007277!7.55e-10!12;UBERON:0000025!5.69e-09!194;UBERON:0009663!6.98e-09!7;UBERON:0002298!3.54e-08!8;UBERON:0000200!3.73e-08!6;UBERON:0001894!7.42e-08!7;UBERON:0006222!7.42e-08!7;UBERON:0004111!7.80e-08!241;UBERON:0002680!2.78e-07!9;UBERON:0001895!2.78e-07!9;UBERON:0010092!2.78e-07!9;UBERON:0000349!3.86e-07!5;UBERON:0001872!4.95e-07!5;UBERON:0002021!5.25e-07!5;UBERON:0000064!8.14e-07!219 | |ontology_enrichment_uberon=UBERON:0000073!3.11e-59!94;UBERON:0001016!3.11e-59!94;UBERON:0001017!1.58e-57!82;UBERON:0005743!2.20e-55!86;UBERON:0001049!2.23e-53!57;UBERON:0005068!2.23e-53!57;UBERON:0006241!2.23e-53!57;UBERON:0007135!2.23e-53!57;UBERON:0007023!1.98e-51!115;UBERON:0000955!1.08e-45!69;UBERON:0006238!1.08e-45!69;UBERON:0002616!1.93e-44!59;UBERON:0003080!9.44e-42!42;UBERON:0002780!2.98e-41!41;UBERON:0001890!2.98e-41!41;UBERON:0006240!2.98e-41!41;UBERON:0002346!5.49e-41!90;UBERON:0003075!4.18e-38!86;UBERON:0007284!4.18e-38!86;UBERON:0002020!1.06e-34!34;UBERON:0003528!1.06e-34!34;UBERON:0001893!1.06e-34!34;UBERON:0000924!1.30e-34!173;UBERON:0006601!1.30e-34!173;UBERON:0002791!1.20e-33!33;UBERON:0001869!4.28e-33!32;UBERON:0004121!3.97e-32!169;UBERON:0003056!1.05e-28!61;UBERON:0002619!2.11e-26!22;UBERON:0000153!2.62e-26!129;UBERON:0007811!2.62e-26!129;UBERON:0000956!2.30e-25!25;UBERON:0000203!2.30e-25!25;UBERON:0000033!3.43e-25!123;UBERON:0001950!3.30e-24!20;UBERON:0003076!1.99e-12!15;UBERON:0003057!1.99e-12!15;UBERON:0002420!4.36e-11!9;UBERON:0007245!4.36e-11!9;UBERON:0010009!4.36e-11!9;UBERON:0010011!4.36e-11!9;UBERON:0000454!4.36e-11!9;UBERON:0002308!1.04e-10!9;UBERON:0000125!1.04e-10!9;UBERON:0004732!1.43e-10!13;UBERON:0001871!4.49e-10!7;UBERON:0004733!7.55e-10!12;UBERON:0002028!7.55e-10!12;UBERON:0007277!7.55e-10!12;UBERON:0000025!5.69e-09!194;UBERON:0009663!6.98e-09!7;UBERON:0002298!3.54e-08!8;UBERON:0000200!3.73e-08!6;UBERON:0001894!7.42e-08!7;UBERON:0006222!7.42e-08!7;UBERON:0004111!7.80e-08!241;UBERON:0002680!2.78e-07!9;UBERON:0001895!2.78e-07!9;UBERON:0010092!2.78e-07!9;UBERON:0000349!3.86e-07!5;UBERON:0001872!4.95e-07!5;UBERON:0002021!5.25e-07!5;UBERON:0000064!8.14e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.64e-38;41!UBERON:0001890;5.64e-38;41!UBERON:0001869;3.44e-37;32!UBERON:0003528;4.30e-37;34!UBERON:0002020;4.30e-37;34!UBERON:0001893;5.51e-37;34!UBERON:0002791;6.77e-37;32!UBERON:0002619;4.71e-36;22!UBERON:0000073;1.11e-35;53!UBERON:0002616;1.11e-35;53!UBERON:0001950;5.36e-33;20!UBERON:0000956;6.70e-31;25!UBERON:0000203;6.70e-31;25!UBERON:0001017;5.96e-26;75!UBERON:0001016;6.71e-25;83!UBERON:0000955;2.56e-24;68!UBERON:0002420;9.57e-15;9!UBERON:0007245;9.57e-15;9!UBERON:0010009;9.57e-15;9!UBERON:0010011;9.57e-15;9!UBERON:0000454;9.57e-15;9!UBERON:0000125;3.20e-14;9!UBERON:0002308;3.20e-14;9!UBERON:0007023;3.47e-14;114!UBERON:0004732;1.81e-12;13!UBERON:0001871;8.12e-12;6!UBERON:0009663;1.08e-11;7!UBERON:0004733;1.81e-11;12!UBERON:0002028;1.81e-11;12!UBERON:0011216;8.25e-11;132!UBERON:0000200;1.06e-10;6!UBERON:0000922;2.28e-10;49!UBERON:0001894;2.61e-10;7!UBERON:0000349;2.65e-09;5!UBERON:0001872;3.78e-09;5!UBERON:0002021;4.07e-09;5!UBERON:0002298;4.63e-09;6!UBERON:0000369;4.86e-08;4!UBERON:0002435;4.86e-08;4!UBERON:0000204;4.86e-08;4!UBERON:0002680;5.21e-08;9!UBERON:0001895;5.21e-08;9!UBERON:0000013;3.07e-07;5!UBERON:0002410;3.07e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.35e-74,89;UBERON:0001017,4.47e-70,81;UBERON:0001049,3.27e-67,56;UBERON:0005068,3.27e-67,56;UBERON:0006241,3.27e-67,56;UBERON:0007135,3.27e-67,56;UBERON:0000073,2.72e-63,53;UBERON:0002616,2.72e-63,53;UBERON:0000955,4.97e-54,68;UBERON:0006238,4.97e-54,68;UBERON:0002780,7.33e-53,41;UBERON:0001890,7.33e-53,41;UBERON:0003080,7.33e-53,41;UBERON:0006240,7.33e-53,41;UBERON:0007023,7.72e-49,114;UBERON:0002346,7.13e-48,86;UBERON:0003075,1.41e-45,82;UBERON:0007284,1.41e-45,82;UBERON:0003528,9.07e-44,34;UBERON:0002020,9.07e-44,34;UBERON:0001893,9.07e-44,34;UBERON:0001869,1.60e-41,32;UBERON:0002791,3.99e-41,32;UBERON:0003056,1.66e-36,61;UBERON:0002619,4.84e-36,22;UBERON:0004121,1.56e-34,171;UBERON:0000924,1.56e-34,171;UBERON:0006601,1.56e-34,171;UBERON:0010371,2.22e-33,104;UBERON:0001950,5.46e-33,20;UBERON:0011216,6.63e-32,223;UBERON:0000956,6.86e-31,25;UBERON:0000203,6.86e-31,25;UBERON:0010314,9.04e-24,132;UBERON:0003076,5.24e-15,15;UBERON:0003057,5.24e-15,15;UBERON:0002420,9.21e-15,9;UBERON:0007245,9.21e-15,9;UBERON:0010009,9.21e-15,9;UBERON:0010011,9.21e-15,9;UBERON:0000454,9.21e-15,9;UBERON:0000125,3.08e-14,9;UBERON:0002308,3.08e-14,9;UBERON:0004732,1.78e-12,13;UBERON:0000025,3.60e-12,192;UBERON:0001871,8.32e-12,6;UBERON:0009663,1.04e-11,7;UBERON:0004733,1.76e-11,12;UBERON:0002028,1.76e-11,12;UBERON:0007277,1.76e-11,12;UBERON:0000200,1.06e-10,6;UBERON:0001894,2.73e-10,7;UBERON:0006222,2.73e-10,7;UBERON:0000349,2.67e-09,5;UBERON:0004111,3.72e-09,240;UBERON:0001872,3.76e-09,5;UBERON:0002021,4.07e-09,5;UBERON:0002298,4.50e-09,6;UBERON:0000922,1.58e-08,592;UBERON:0000369,4.78e-08,4;UBERON:0002435,4.78e-08,4;UBERON:0000204,4.78e-08,4;UBERON:0010082,4.78e-08,4;UBERON:0002680,5.19e-08,9;UBERON:0001895,5.19e-08,9;UBERON:0010092,5.19e-08,9;UBERON:0000013,3.48e-07,5;UBERON:0002410,3.48e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60057375499824,0,0.313454721478088,0.286235987131057,0.136874425072884,0,1.68109492645493,2.46301768349837,2.44003422072406,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.5710953922685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1973706129595,8.34937540425357,8.01738205799677,4.45742536566093,3.5324919122588,18.6138453128673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0.381988425558278,1.17217447210047,0,0,0.901029173531752,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599837947092342,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,3.55732473911449,58.5629342359298,22.4253755705532,62.8185995003808,29.9831213276987,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0.574265537996172,0,0,0,0,0,0,0.429680979473094,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,170.993395415803,207.768728038327,0,0,0.422250816255987,0.398495976502139,1.65770349318689,0.251932747854276,20.2491991354267,13.7854982116398,0,0,0,0,2.86065876347107,0,0,147.338577406473,119.578078530626,161.687176380967,0,0,0.724999575434793,0,0,0,3.44743373241465,0.874813840149763,17.1888744983959,255.9792605002,269.774233205038,146.4784668644,297.237050695132,130.336499958514,105.085605236753,0,0,15.3900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0.335643173951685,0,0,0,0,0,0,0.995261931078505,1.23840590304675,7.94339188413713,29.0590706107009,25.4541714229796,27.1497068714184,15.434859452575,1.60515529459758,84.5694649068474,0,0,0,59.582244830258,6.04953580243319,135.896306163938,4.10712767585172,0.300646838828985,0,0,0,0,0,0,0.416024019039416,0,0,0,6.11543338847105,0,0,0,0,0.581934098930517,0,9.94315259434343,28.2306364772307,0,173.218337735284,0,0,1.28071796843612,0,0,0,6.34901492089269,0,0,0,0.135904206073614,0.313808538937,0,0,117.081956298409,52.9823816312013,0,0,0,0,0.458320848023367,0,0,0,0.223171457441873,0.470284307407084,0,0,0.157566364614447,0.0824158583811665,0,0,0,163.022086410907,175.021376853375,2.73280352390533,7.97728732263956,5.40072439437941,0,0,243.484223085363,0,1.02447419488958,5.82245928298479,0,0,0,0,0.662091970365432,0,0,0,0,3.59190574687462,0,0,1.01980882368113,0,0,37.4920573448497,36.7606632844678,0,0,0.533937062838473,0.157204305099666,0,0,0.197611631897944,0,0,0,0,0,0,0,151.517658774355,225.62656380373,201.307016576052,14.9086390879419,27.6213338326762,34.5256000354092,0.553394539744923,0,0.303298235083296,0.856396000634902,0,0,2.17381542916238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,1.56596575179127,0,0,0,0,0,0,0,0,0,0,0,0,214.715351343638,0,0,0,0.327609848846413,0,0,1.79988656269437,0,0,0,0,0,0,97.5834053046862,62.1070913644887,1.57265941855896,66.3994600207445,0.848662649770126,16.5808437679313,1.61116493536703,1.11728983594649,0,0,24.8176931968496,0.352675943690684,0,233.087857875052,109.1063637707,180.386260734581,139.068894955232,235.939107663528,180.154642669288,174.393697282399,5.71077681036618,0,0,0,0.346576998451015,0,0,0,24.9698290119534,0.20170506870352,0,0,0,0,128.32141077495,117.161714792077,200.486192606149,163.042048008534,239.027991540962,0,1.48863353516788,6.68310728566558,0,2.14280734351315,5.71682327772001,66.7662164660295,140.467572063751,0,0.806637912890455,0,43.9764172360101,154.171381231318,0,0,17.7394389842162,200.79372391265,0,14.6105395281519,0,0,9.0060445662587,0,2.44106993273063,3.12944890144643,0,0,0,0,0.430227358820278,0.236664001461131,0,45.7258014206203,0,0,0,0,0,0,0,0.307988420568741,0,0.971421986118279,4.44484980578001,47.9471368138897,0.118920090777569,0,9.67476547359776,11.4731761110672,1.62065732026684,2.84127428655144,0,0.245148321753905,0,29.8388870014717,14.5552736160272,29.585900930838,0,0,0.966868319603658,0.799529247399431,0,0,0,1.46067277649303,0.458729283404541,5.8769229092095,17.1971002790571,194.591644926398,255.265153849121,4.7612415646386,0,0,0,9.08398258812568,0.327796715891087,3.29416102629736,0,0.26721740526556,0,0,1.97024615367422,1.60778478093707,45.6043191702329,74.058025037117,0.426467963801962,2.14257988317366,0.258355639344024,0.620747142958579,0,0,0,0,0.684466602170562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| 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| ||
|short_description=p1@JPH4 | |short_description=p1@JPH4 | ||
}} | }} |
Latest revision as of 12:30, 19 September 2015
Short description: | p1@JPH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_JPH4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000356300, ENST00000397118, NM_001146028, NM_032452, uc001wkq.2, uc001wkr.2, uc001wks.2_5end |
EntrezGene: | JPH4 |
HGNC: | 20156 |
UniProt: | Q96JJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.32e-10 | 8 |
neuron | 2.41e-08 | 6 |
neuroblast | 2.41e-08 | 6 |
electrically signaling cell | 2.41e-08 | 6 |
embryonic stem cell | 8.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 7.82e-08 | 10 |