FFCP PHASE1:Hg19::chr14:23451697..23451713,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84962 | |EntrezGene=84962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20250 | |HGNC=20250 | ||
|TSSclassifier=strong | |||
|UniProt=Q96IF1 | |UniProt=Q96IF1 | ||
|association_with_transcript=134bp_to_NM_032876,uc001whz.2_5end | |association_with_transcript=134bp_to_NM_032876,uc001whz.2_5end | ||
|cluster_id=chr14:23451697..23451713,- | |||
|coexpression_cluster_id=C1716 | |coexpression_cluster_id=C1716 | ||
|description=CAGE_peak_4_at_AJUBA_5end | |description=CAGE_peak_4_at_AJUBA_5end | ||
|id=chr14:23451697..23451713,- | |id=chr14:23451697..23451713,- | ||
|ontology_enrichment_celltype=CL:0000066!1.39e-46!254;CL:0000220!7.83e-33!246;CL:0002321!1.45e-32!248;CL:0000548!7.54e-18!679;CL:0000004!7.54e-18!679;CL:0000255!7.54e-18!679;CL:0000223!3.74e-17!59;CL:0000012!4.73e-17!682;CL:0002076!1.80e-16!43;CL:0000076!3.33e-15!62;CL:0000222!3.35e-11!119;CL:0000055!1.69e-09!180;CL:0000003!2.98e-08!722;CL:0000144!3.25e-08!625;CL:0000213!4.07e-08!57;CL:0000215!4.07e-08!57;CL:1000497!4.13e-08!18;CL:0002518!4.13e-08!18;CL:1000449!6.74e-08!16;CL:0002368!7.22e-08!13;CL:0002251!1.42e-07!21;CL:0000063!1.55e-07!578 | |ontology_enrichment_celltype=CL:0000066!1.39e-46!254;CL:0000220!7.83e-33!246;CL:0002321!1.45e-32!248;CL:0000548!7.54e-18!679;CL:0000004!7.54e-18!679;CL:0000255!7.54e-18!679;CL:0000223!3.74e-17!59;CL:0000012!4.73e-17!682;CL:0002076!1.80e-16!43;CL:0000076!3.33e-15!62;CL:0000222!3.35e-11!119;CL:0000055!1.69e-09!180;CL:0000003!2.98e-08!722;CL:0000144!3.25e-08!625;CL:0000213!4.07e-08!57;CL:0000215!4.07e-08!57;CL:1000497!4.13e-08!18;CL:0002518!4.13e-08!18;CL:1000449!6.74e-08!16;CL:0002368!7.22e-08!13;CL:0002251!1.42e-07!21;CL:0000063!1.55e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.25e-13;42!CL:1000449;2.21e-10;15!CL:1000497;8.40e-10;17!CL:0002518;8.40e-10;17!CL:0002368;6.48e-09;13!CL:1000507;1.22e-08;10!CL:1000494;1.22e-08;10!CL:0002681;2.81e-08;12!CL:0002584;2.81e-08;12!CL:0002251;4.98e-08;20!CL:0000076;1.95e-07;63!CL:0000077;3.02e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.83e-48,253;CL:0002321,1.41e-28,250;CL:0000223,8.84e-19,58;CL:0002076,8.44e-18,42;CL:0000076,1.63e-16,63;CL:1000449,2.45e-10,15;CL:1000497,9.21e-10,17;CL:0002518,9.21e-10,17;CL:0002368,5.40e-09,13;CL:1000507,1.34e-08,10;CL:1000494,1.34e-08,10;CL:0002681,3.01e-08,12;CL:0002584,3.01e-08,12;CL:0002251,5.10e-08,20;CL:0000213,6.92e-08,58;CL:0000215,6.92e-08,58;CL:0000222,1.17e-07,121;CL:0000077,2.04e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000223;1.73e-09;58 | |||
|ontology_enrichment_disease=DOID:305!1.55e-11!106;DOID:0050687!1.23e-10!143;DOID:7!3.15e-08!39 | |ontology_enrichment_disease=DOID:305!1.55e-11!106;DOID:0050687!1.23e-10!143;DOID:7!3.15e-08!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.09e-10,106;DOID:0050687,1.02e-08,143;DOID:7,1.42e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.09e-17!238;UBERON:0009142!1.09e-17!238;UBERON:0002100!9.19e-16!216;UBERON:0000475!1.77e-15!365;UBERON:0004119!1.06e-14!169;UBERON:0000925!1.06e-14!169;UBERON:0006595!1.06e-14!169;UBERON:0000481!9.34e-14!347;UBERON:0005256!4.96e-13!143;UBERON:0000490!8.99e-12!138;UBERON:0006554!1.86e-11!44;UBERON:0000468!2.63e-11!659;UBERON:0009569!5.26e-11!113;UBERON:0001008!8.88e-11!45;UBERON:0000483!1.04e-10!309;UBERON:0000119!1.07e-10!312;UBERON:0005911!1.23e-10!82;UBERON:0001007!1.32e-10!155;UBERON:0001555!1.32e-10!155;UBERON:0007026!1.32e-10!155;UBERON:0000467!2.64e-10!625;UBERON:0005177!3.16e-10!107;UBERON:0003102!4.14e-10!95;UBERON:0000480!4.18e-10!626;UBERON:0000466!7.46e-09!126;UBERON:0003914!1.46e-08!118;UBERON:0002417!1.62e-08!61;UBERON:0000916!1.62e-08!61;UBERON:0005172!1.95e-08!55;UBERON:0005173!1.95e-08!55;UBERON:0000058!2.75e-08!26;UBERON:0001048!4.31e-08!168;UBERON:0000077!4.65e-08!130;UBERON:0004211!6.74e-08!16;UBERON:0001285!6.74e-08!16;UBERON:0007684!6.74e-08!16;UBERON:0003220!6.74e-08!16;UBERON:0004208!6.74e-08!16;UBERON:0002113!1.23e-07!27;UBERON:0003918!1.23e-07!27;UBERON:0005095!1.23e-07!27;UBERON:0007687!1.23e-07!27;UBERON:0003064!1.24e-07!37;UBERON:0006555!1.42e-07!17;UBERON:0005103!1.42e-07!17;UBERON:0000083!1.42e-07!17;UBERON:0009201!1.42e-07!17;UBERON:0004819!1.42e-07!17;UBERON:0006553!1.42e-07!17;UBERON:0003074!1.42e-07!17;UBERON:0003060!1.42e-07!17;UBERON:0000080!2.21e-07!18;UBERON:0002120!2.21e-07!18;UBERON:0004875!2.21e-07!18;UBERON:0005721!2.21e-07!18;UBERON:0005754!2.21e-07!18;UBERON:0007297!2.21e-07!18;UBERON:0003929!2.82e-07!54;UBERON:0005085!4.00e-07!29;UBERON:0001004!4.95e-07!72;UBERON:0000477!6.28e-07!286;UBERON:0001851!7.33e-07!16;UBERON:0004921!8.63e-07!129;UBERON:0004185!8.63e-07!129 | |ontology_enrichment_uberon=UBERON:0003104!1.09e-17!238;UBERON:0009142!1.09e-17!238;UBERON:0002100!9.19e-16!216;UBERON:0000475!1.77e-15!365;UBERON:0004119!1.06e-14!169;UBERON:0000925!1.06e-14!169;UBERON:0006595!1.06e-14!169;UBERON:0000481!9.34e-14!347;UBERON:0005256!4.96e-13!143;UBERON:0000490!8.99e-12!138;UBERON:0006554!1.86e-11!44;UBERON:0000468!2.63e-11!659;UBERON:0009569!5.26e-11!113;UBERON:0001008!8.88e-11!45;UBERON:0000483!1.04e-10!309;UBERON:0000119!1.07e-10!312;UBERON:0005911!1.23e-10!82;UBERON:0001007!1.32e-10!155;UBERON:0001555!1.32e-10!155;UBERON:0007026!1.32e-10!155;UBERON:0000467!2.64e-10!625;UBERON:0005177!3.16e-10!107;UBERON:0003102!4.14e-10!95;UBERON:0000480!4.18e-10!626;UBERON:0000466!7.46e-09!126;UBERON:0003914!1.46e-08!118;UBERON:0002417!1.62e-08!61;UBERON:0000916!1.62e-08!61;UBERON:0005172!1.95e-08!55;UBERON:0005173!1.95e-08!55;UBERON:0000058!2.75e-08!26;UBERON:0001048!4.31e-08!168;UBERON:0000077!4.65e-08!130;UBERON:0004211!6.74e-08!16;UBERON:0001285!6.74e-08!16;UBERON:0007684!6.74e-08!16;UBERON:0003220!6.74e-08!16;UBERON:0004208!6.74e-08!16;UBERON:0002113!1.23e-07!27;UBERON:0003918!1.23e-07!27;UBERON:0005095!1.23e-07!27;UBERON:0007687!1.23e-07!27;UBERON:0003064!1.24e-07!37;UBERON:0006555!1.42e-07!17;UBERON:0005103!1.42e-07!17;UBERON:0000083!1.42e-07!17;UBERON:0009201!1.42e-07!17;UBERON:0004819!1.42e-07!17;UBERON:0006553!1.42e-07!17;UBERON:0003074!1.42e-07!17;UBERON:0003060!1.42e-07!17;UBERON:0000080!2.21e-07!18;UBERON:0002120!2.21e-07!18;UBERON:0004875!2.21e-07!18;UBERON:0005721!2.21e-07!18;UBERON:0005754!2.21e-07!18;UBERON:0007297!2.21e-07!18;UBERON:0003929!2.82e-07!54;UBERON:0005085!4.00e-07!29;UBERON:0001004!4.95e-07!72;UBERON:0000477!6.28e-07!286;UBERON:0001851!7.33e-07!16;UBERON:0004921!8.63e-07!129;UBERON:0004185!8.63e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.55e-11;30!UBERON:0001008;2.55e-11;30!UBERON:0006555;2.21e-10;15!UBERON:0004819;2.21e-10;15!UBERON:0001285;2.21e-10;15!UBERON:0007684;2.21e-10;15!UBERON:0001851;4.17e-09;15!UBERON:0002113;7.61e-09;24!UBERON:0011143;7.61e-09;24!UBERON:0004211;1.22e-08;10!UBERON:0009773;1.22e-08;10!UBERON:0001231;1.22e-08;10!UBERON:0004810;1.22e-08;10!UBERON:0001225;2.81e-08;12!UBERON:0008987;2.81e-08;12!UBERON:0000353;7.27e-08;15!UBERON:0000489;5.56e-07;29 | |||
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| ||
|short_description=p4@AJUBA | |short_description=p4@AJUBA | ||
}} | }} |
Latest revision as of 08:28, 19 September 2015
Short description: | p4@AJUBA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AJUBA_5end |
Coexpression cluster: | C1716_Corneal_oral_Keratinocyte_mesothelioma_Esophageal_Urothelial_anaplastic |
Association with transcript: | 134bp_to_NM_032876, uc001whz.2_5end |
EntrezGene: | AJUBA |
HGNC: | 20250 |
UniProt: | Q96IF1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.83e-48 | 253 |
embryonic cell | 1.41e-28 | 250 |
endodermal cell | 8.84e-19 | 58 |
endo-epithelial cell | 8.44e-18 | 42 |
squamous epithelial cell | 1.63e-16 | 63 |
epithelial cell of nephron | 2.45e-10 | 15 |
kidney cell | 9.21e-10 | 17 |
kidney epithelial cell | 9.21e-10 | 17 |
respiratory epithelial cell | 5.40e-09 | 13 |
kidney tubule cell | 1.34e-08 | 10 |
nephron tubule epithelial cell | 1.34e-08 | 10 |
kidney cortical cell | 3.01e-08 | 12 |
renal cortical epithelial cell | 3.01e-08 | 12 |
epithelial cell of alimentary canal | 5.10e-08 | 20 |
lining cell | 6.92e-08 | 58 |
barrier cell | 6.92e-08 | 58 |
mesodermal cell | 1.17e-07 | 121 |
mesothelial cell | 2.04e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.09e-10 | 106 |
cell type cancer | 1.02e-08 | 143 |
disease of anatomical entity | 1.42e-07 | 39 |