FFCP PHASE1:Hg19::chr10:102505946..102505949,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5076 | |EntrezGene=5076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8616 | |HGNC=8616 | ||
|TSSclassifier=strong | |||
|UniProt=G3V5M8 | |UniProt=G3V5M8 | ||
|association_with_transcript=10bp_to_ENST00000554363_5end | |association_with_transcript=10bp_to_ENST00000554363_5end | ||
|cluster_id=chr10:102505946..102505949,+ | |||
|coexpression_cluster_id=C1556 | |coexpression_cluster_id=C1556 | ||
|description=CAGE_peak_14_at_PAX2_5end | |description=CAGE_peak_14_at_PAX2_5end | ||
|id=chr10:102505946..102505949,+ | |id=chr10:102505946..102505949,+ | ||
|ontology_enrichment_celltype=CL:0000650;6.30e-26;2!CL:1000500;6.30e-26;2!CL:1000618;6.30e-26;2!CL:1001318;6.30e-26;2!CL:0002173;6.30e-26;2!CL:0000669;1.06e-13;4!CL:1000746;2.11e-08;7!CL:1000612;2.11e-08;7 | |ontology_enrichment_celltype=CL:1000497!2.00e-18!18;CL:0002518!2.00e-18!18;CL:1000449!2.26e-15!16;CL:1000507!1.72e-14!12;CL:1000494!1.72e-14!12;CL:0002681!1.41e-13!13;CL:0002584!1.41e-13!13;CL:0002322!7.50e-13!5;CL:0000650!1.41e-10!3;CL:1000618!1.41e-10!3;CL:1001318!1.41e-10!3;CL:0002173!1.41e-10!3;CL:1000500!1.41e-10!3;CL:0000239!2.25e-10!3;CL:1000615!2.25e-10!3;CL:0002306!2.25e-10!3;CL:1000612!8.01e-10!7;CL:1000746!8.01e-10!7;CL:0000167!2.69e-08!1;CL:0000164!2.69e-08!1;CL:0000502!2.69e-08!1;CL:0000172!2.69e-08!1;CL:0000173!2.69e-08!1;CL:0002351!2.69e-08!1 | ||
| | |ontology_enrichment_celltype_v019=CL:0000650;6.30e-26;2!CL:1000500;6.30e-26;2!CL:1000618;6.30e-26;2!CL:1001318;6.30e-26;2!CL:0002173;6.30e-26;2!CL:0000669;1.06e-13;4!CL:1000746;2.11e-08;7!CL:1000612;2.11e-08;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000650,9.18e-26,2;CL:1000500,9.18e-26,2;CL:1000618,9.18e-26,2;CL:1001318,9.18e-26,2;CL:0002173,9.18e-26,2;CL:0000669,1.29e-13,4;CL:1000746,2.35e-08,7;CL:1000612,2.35e-08,7 | ||
|ontology_enrichment_uberon=UBERON:0001301;3.10e-50;1!UBERON:0003567;6.30e-26;2!UBERON:0003838;6.30e-26;2!UBERON:0003586;6.30e-26;2!UBERON:0005169;6.30e-26;2!UBERON:0002321;6.30e-26;2!UBERON:0005215;6.30e-26;2!UBERON:0002303;6.30e-26;2!UBERON:0002319;6.30e-26;2!UBERON:0006947;8.69e-18;3!UBERON:0004054;8.69e-18;3!UBERON:0005904;1.06e-13;4!UBERON:0003891;1.06e-13;4!UBERON:0002113;2.56e-09;24!UBERON:0011143;2.56e-09;24!UBERON:0000074;2.11e-08;7!UBERON:0001229;2.11e-08;7!UBERON:0000489;6.90e-08;29!UBERON:0006554;1.17e-07;30!UBERON:0001008;1.17e-07;30 | |ontology_enrichment_development_v019=UBERON:0007297;6.30e-26;2 | ||
|ontology_enrichment_disease=DOID:4430!2.69e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p14@PAX2 | |short_description=p14@PAX2 | ||
}} | }} |
Latest revision as of 22:13, 15 September 2015
Short description: | p14@PAX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PAX2_5end |
Coexpression cluster: | C1556_epididymis_seminal_Renal_ductus_kidney_rhabdomyosarcoma_renal |
Association with transcript: | 10bp_to_ENST00000554363_5end |
EntrezGene: | PAX2 |
HGNC: | 8616 |
UniProt: | G3V5M8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 9.18e-26 | 2 |
kidney interstitial cell | 9.18e-26 | 2 |
juxtaglomerular complex cell | 9.18e-26 | 2 |
renal interstitial pericyte | 9.18e-26 | 2 |
extraglomerular mesangial cell | 9.18e-26 | 2 |
pericyte cell | 1.29e-13 | 4 |
glomerular cell | 2.35e-08 | 7 |
kidney corpuscule cell | 2.35e-08 | 7 |