FFCP PHASE1:Hg19::chr7:54610124..54610198,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222008 | |EntrezGene=222008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28499 | |HGNC=28499 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAG5 | |UniProt=Q8TAG5 | ||
|association_with_transcript=0bp_to_ENST00000402026_5end | |association_with_transcript=0bp_to_ENST00000402026_5end | ||
|cluster_id=chr7:54610124..54610198,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_VSTM2A_5end | |description=CAGE_peak_1_at_VSTM2A_5end | ||
|id=chr7:54610124..54610198,+ | |id=chr7:54610124..54610198,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:169;2.31e-07;6 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0001869;2.22e-68;32!UBERON:0002619;1.44e-65;22!UBERON:0001893;1.46e-65;34!UBERON:0003528;2.40e-65;34!UBERON:0002020;2.40e-65;34!UBERON:0002791;4.42e-64;32!UBERON:0002780;2.10e-60;41!UBERON:0001890;2.10e-60;41!UBERON:0001950;2.96e-60;20!UBERON:0000956;3.28e-57;25!UBERON:0000203;3.28e-57;25!UBERON:0000073;5.77e-48;53!UBERON:0002616;5.77e-48;53!UBERON:0001017;2.89e-34;75!UBERON:0000955;1.32e-32;68!UBERON:0001016;1.09e-27;83!UBERON:0001871;1.49e-20;6!UBERON:0002420;2.00e-20;9!UBERON:0007245;2.00e-20;9!UBERON:0010009;2.00e-20;9!UBERON:0010011;2.00e-20;9!UBERON:0000454;2.00e-20;9!UBERON:0000125;9.91e-20;9!UBERON:0002308;9.91e-20;9!UBERON:0000200;1.16e-18;6!UBERON:0002298;5.88e-16;6!UBERON:0002021;8.90e-16;5!UBERON:0001872;1.57e-15;5!UBERON:0000349;2.36e-15;5!UBERON:0009663;7.70e-15;7!UBERON:0011216;1.77e-13;132!UBERON:0000369;1.41e-12;4!UBERON:0002435;1.41e-12;4!UBERON:0000204;1.41e-12;4!UBERON:0007023;4.02e-12;114!UBERON:0001870;2.98e-10;3!UBERON:0005383;7.53e-10;3!UBERON:0005382;7.53e-10;3!UBERON:0001894;1.68e-09;7!UBERON:0002240;5.79e-09;3!UBERON:0005174;5.79e-09;3!UBERON:0001137;5.79e-09;3!UBERON:0000988;5.88e-09;3!UBERON:0001896;1.08e-08;3!UBERON:0005290;1.08e-08;3!UBERON:0004733;1.21e-07;12!UBERON:0002028;1.21e-07;12!UBERON:0010314;1.36e-07;132!UBERON:0001876;1.93e-07;2!UBERON:0002702;2.43e-07;2!UBERON:0002771;2.87e-07;2!UBERON:0001873;4.57e-07;2!UBERON:0004732;5.26e-07;13!UBERON:0001954;7.31e-07;2!UBERON:0003022;7.31e-07;2!UBERON:0002421;7.31e-07;2!UBERON:0002600;7.31e-07;2 | |ontology_enrichment_development_v019=UBERON:0006601;2.08e-20;82!UBERON:0006241;5.79e-09;3!UBERON:0003057;5.79e-09;3!UBERON:0010122;4.57e-07;2 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;2.31e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.38e-07,6 | |||
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| ||
|short_description=p1@VSTM2A | |short_description=p1@VSTM2A | ||
}} | }} |
Latest revision as of 00:03, 19 September 2015
Short description: | p1@VSTM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VSTM2A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000402026_5end |
EntrezGene: | VSTM2A |
HGNC: | 28499 |
UniProt: | Q8TAG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.38e-07 | 6 |