FFCP PHASE1:Hg19::chr11:1856169..1856184,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90019 | |EntrezGene=90019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19264 | |HGNC=19264 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBL4 | |UniProt=F8WBL4 | ||
|association_with_transcript=-36bp_to_ENST00000424556_5end | |association_with_transcript=-36bp_to_ENST00000424556_5end | ||
|cluster_id=chr11:1856169..1856184,+ | |||
|coexpression_cluster_id=C1138 | |coexpression_cluster_id=C1138 | ||
|description=CAGE_peak_3_at_SYT8_5end | |description=CAGE_peak_3_at_SYT8_5end | ||
|id=chr11:1856169..1856184,+ | |id=chr11:1856169..1856184,+ | ||
|ontology_enrichment_celltype=CL:0002327;1.80e-13;4!CL:0000575;1.58e-11;2!CL:0002623;2.11e-08;3!CL:0002076;3.81e-08;42!CL:0002368;9.77e-07;13 | |ontology_enrichment_celltype=CL:0002076!1.72e-17!43;CL:0000223!4.65e-15!59;CL:0002368!1.01e-09!13;CL:0002251!5.35e-09!21;CL:0002623!6.10e-08!3;CL:0000066!5.46e-07!254 | ||
| | |ontology_enrichment_celltype_v019=CL:0002327;1.80e-13;4!CL:0000575;1.58e-11;2!CL:0002623;2.11e-08;3!CL:0002076;3.81e-08;42!CL:0002368;9.77e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.80e-13,4;CL:0000575,1.38e-11,2;CL:0002076,5.06e-11,42;CL:0002623,2.15e-08,3;CL:0000223,1.74e-07,58;CL:0000066,5.48e-07,253;CL:0002368,9.78e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.38e-11;2!UBERON:0010056;1.38e-11;2!UBERON:0006242;6.42e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001723;1.49e-16;3!UBERON:0001033;1.49e-16;3!UBERON:0001911;1.80e-13;4!UBERON:0000165;3.72e-11;28!UBERON:0000161;7.56e-10;19!UBERON:0000166;7.56e-10;19!UBERON:0001041;1.99e-09;14!UBERON:0000974;6.44e-09;6!UBERON:0001044;8.18e-09;6!UBERON:0003293;8.18e-09;6!UBERON:0003294;8.18e-09;6!UBERON:0010047;8.18e-09;6!UBERON:0003408;8.18e-09;6!UBERON:0000167;8.18e-09;6!UBERON:0002110;2.14e-08;3!UBERON:0001043;6.83e-08;3!UBERON:0002294;1.11e-07;7!UBERON:0001173;1.11e-07;7!UBERON:0000033;3.00e-07;50!UBERON:0007811;6.80e-07;52!UBERON:0004913;7.59e-07;1!UBERON:0003703;7.59e-07;1!UBERON:0001174;7.59e-07;1!UBERON:0004914;7.59e-07;1 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!7.34e-16!169;UBERON:0000925!7.34e-16!169;UBERON:0006595!7.34e-16!169;UBERON:0000166!1.70e-13!21;UBERON:0000165!8.78e-13!28;UBERON:0000930!8.78e-13!28;UBERON:0000161!1.07e-12!35;UBERON:0001004!2.17e-12!72;UBERON:0001444!7.16e-12!48;UBERON:0000078!4.14e-11!18;UBERON:0001007!1.10e-10!155;UBERON:0001555!1.10e-10!155;UBERON:0007026!1.10e-10!155;UBERON:0000077!4.16e-10!130;UBERON:0001044!7.06e-10!6;UBERON:0003293!7.06e-10!6;UBERON:0003294!7.06e-10!6;UBERON:0010047!7.06e-10!6;UBERON:0000167!7.06e-10!6;UBERON:0004921!1.74e-08!129;UBERON:0004185!1.74e-08!129;UBERON:0001041!3.92e-08!98;UBERON:0001723!4.63e-08!3;UBERON:0001033!4.63e-08!3;UBERON:0010056!4.63e-08!3;UBERON:0003102!4.96e-08!95;UBERON:0003408!1.16e-07!10;UBERON:0000065!1.28e-07!53;UBERON:0006947!3.09e-07!3;UBERON:0004054!3.09e-07!3;UBERON:0006562!5.96e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.49e-16;3!UBERON:0001033;1.49e-16;3!UBERON:0001911;1.80e-13;4!UBERON:0000165;3.72e-11;28!UBERON:0000161;7.56e-10;19!UBERON:0000166;7.56e-10;19!UBERON:0001041;1.99e-09;14!UBERON:0000974;6.44e-09;6!UBERON:0001044;8.18e-09;6!UBERON:0003293;8.18e-09;6!UBERON:0003294;8.18e-09;6!UBERON:0010047;8.18e-09;6!UBERON:0003408;8.18e-09;6!UBERON:0000167;8.18e-09;6!UBERON:0002110;2.14e-08;3!UBERON:0001043;6.83e-08;3!UBERON:0002294;1.11e-07;7!UBERON:0001173;1.11e-07;7!UBERON:0000033;3.00e-07;50!UBERON:0007811;6.80e-07;52!UBERON:0004913;7.59e-07;1!UBERON:0003703;7.59e-07;1!UBERON:0001174;7.59e-07;1!UBERON:0004914;7.59e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.11e-16,3;UBERON:0001033,1.11e-16,3;UBERON:0010056,1.11e-16,3;UBERON:0000166,1.50e-14,22;UBERON:0001911,1.80e-13,4;UBERON:0005333,1.80e-13,4;UBERON:0008425,1.80e-13,4;UBERON:0005311,1.80e-13,4;UBERON:0000165,9.69e-11,29;UBERON:0000930,9.69e-11,29;UBERON:0000161,1.45e-10,36;UBERON:0001444,3.73e-09,49;UBERON:0004119,7.45e-09,160;UBERON:0000925,7.45e-09,160;UBERON:0006595,7.45e-09,160;UBERON:0001044,8.40e-09,6;UBERON:0003293,8.40e-09,6;UBERON:0003294,8.40e-09,6;UBERON:0010047,8.40e-09,6;UBERON:0000167,8.40e-09,6;UBERON:0001042,1.01e-08,10;UBERON:0009145,1.01e-08,10;UBERON:0000153,2.05e-08,62;UBERON:0007811,2.05e-08,62;UBERON:0002110,2.07e-08,3;UBERON:0006242,2.07e-08,3;UBERON:0001004,4.60e-08,74;UBERON:0006562,6.19e-08,11;UBERON:0001043,6.49e-08,3;UBERON:0009143,6.49e-08,3;UBERON:0000033,8.68e-08,56;UBERON:0000076,6.11e-07,8;UBERON:0004913,7.60e-07,1;UBERON:0003703,7.60e-07,1;UBERON:0001174,7.60e-07,1;UBERON:0004914,7.60e-07,1 | |||
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| ||
|short_description=p3@SYT8 | |short_description=p3@SYT8 | ||
}} | }} |
Latest revision as of 03:01, 17 September 2015
Short description: | p3@SYT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SYT8_5end |
Coexpression cluster: | C1138_Mammary_salivary_glassy_gall_Small_oral_throat |
Association with transcript: | -36bp_to_ENST00000424556_5end |
EntrezGene: | SYT8 |
HGNC: | 19264 |
UniProt: | F8WBL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.80e-13 | 4 |
corneal epithelial cell | 1.38e-11 | 2 |
endo-epithelial cell | 5.06e-11 | 42 |
acinar cell of salivary gland | 2.15e-08 | 3 |
endodermal cell | 1.74e-07 | 58 |
epithelial cell | 5.48e-07 | 253 |
respiratory epithelial cell | 9.78e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.11e-16 | 3 |
gustatory system | 1.11e-16 | 3 |
future tongue | 1.11e-16 | 3 |
oral opening | 1.50e-14 | 22 |
mammary gland | 1.80e-13 | 4 |
mammary bud | 1.80e-13 | 4 |
mammary ridge | 1.80e-13 | 4 |
mammary placode | 1.80e-13 | 4 |
mouth | 9.69e-11 | 29 |
stomodeum | 9.69e-11 | 29 |
orifice | 1.45e-10 | 36 |
subdivision of head | 3.73e-09 | 49 |
endoderm-derived structure | 7.45e-09 | 160 |
endoderm | 7.45e-09 | 160 |
presumptive endoderm | 7.45e-09 | 160 |
saliva-secreting gland | 8.40e-09 | 6 |
gland of oral region | 8.40e-09 | 6 |
gland of foregut | 8.40e-09 | 6 |
oral gland | 8.40e-09 | 6 |
oral cavity | 8.40e-09 | 6 |
chordate pharynx | 1.01e-08 | 10 |
pharyngeal region of foregut | 1.01e-08 | 10 |
anterior region of body | 2.05e-08 | 62 |
craniocervical region | 2.05e-08 | 62 |
gallbladder | 2.07e-08 | 3 |
gall bladder primordium | 2.07e-08 | 3 |
respiratory system | 4.60e-08 | 74 |
pharynx | 6.19e-08 | 11 |
esophagus | 6.49e-08 | 3 |
esophageal region | 6.49e-08 | 3 |
head | 8.68e-08 | 56 |
external ectoderm | 6.11e-07 | 8 |
hepatopancreatic ampulla | 7.60e-07 | 1 |
extrahepatic bile duct | 7.60e-07 | 1 |
common bile duct | 7.60e-07 | 1 |
duodenal papilla | 7.60e-07 | 1 |