FFCP PHASE1:Hg19::chr1:153940741..153940751,+: Difference between revisions
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|id=chr1:153940741..153940751,+
|short_description=p7@CREB3L4
|description=CAGE_peak_7_at_CREB3L4_5end
|association_with_transcript=1bp_to_ENST00000473340_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=148327 | |EntrezGene=148327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18854 | |HGNC=18854 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000473340_5end | |||
|cluster_id=chr1:153940741..153940751,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_7_at_CREB3L4_5end | |||
|id=chr1:153940741..153940751,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002327;6.50e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,6.50e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.07e-23;1!UBERON:0008801;1.87e-23;1!UBERON:0006298;2.93e-23;1!UBERON:0009847;1.00e-08;3!UBERON:0003353;1.00e-08;3 | |||
|ontology_enrichment_disease=DOID:5093!1.71e-12!4;DOID:1612!1.71e-12!4;DOID:171!7.75e-08!10;DOID:169!1.03e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.14e-23;4!DOID:1612;5.14e-23;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.60e-23,4;DOID:1612,4.60e-23,4 | |||
|ontology_enrichment_uberon=UBERON:0001829!1.14e-11!2;UBERON:0003127!2.73e-11!2;UBERON:0000078!7.89e-10!18;UBERON:0001044!1.48e-08!6;UBERON:0003293!1.48e-08!6;UBERON:0003294!1.48e-08!6;UBERON:0010047!1.48e-08!6;UBERON:0000167!1.48e-08!6;UBERON:0000310!1.49e-08!10;UBERON:0000166!2.48e-08!21;UBERON:0000161!3.43e-08!35;UBERON:0001443!8.88e-08!11;UBERON:0001723!1.35e-07!3;UBERON:0001033!1.35e-07!3;UBERON:0010056!1.35e-07!3;UBERON:0007023!1.40e-07!115;UBERON:0006947!1.69e-07!3;UBERON:0004054!1.69e-07!3;UBERON:0003101!2.01e-07!22;UBERON:0000079!2.01e-07!22;UBERON:0003135!4.28e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;7.82e-45;2!UBERON:0001044;9.39e-34;6!UBERON:0003293;9.39e-34;6!UBERON:0003294;9.39e-34;6!UBERON:0010047;9.39e-34;6!UBERON:0003408;9.39e-34;6!UBERON:0000167;9.39e-34;6!UBERON:0001831;1.87e-23;1!UBERON:0001567;1.87e-23;1!UBERON:0001736;2.93e-23;1!UBERON:0002372;5.13e-23;1!UBERON:0001961;5.13e-23;1!UBERON:0001744;5.13e-23;1!UBERON:0001042;5.13e-23;1!UBERON:0001735;5.13e-23;1!UBERON:0000161;5.81e-19;19!UBERON:0000166;5.81e-19;19!UBERON:0001041;6.37e-15;14!UBERON:0004921;3.16e-13;33!UBERON:0000165;5.12e-13;28!UBERON:0004089;1.96e-12;2!UBERON:0006562;3.24e-12;2!UBERON:0002365;9.02e-12;31!UBERON:0002330;9.02e-12;31!UBERON:0000310;8.09e-10;10!UBERON:0001443;5.20e-09;11!UBERON:0002114;1.40e-08;2!UBERON:0001555;3.89e-07;54!UBERON:0001911;6.50e-07;4!UBERON:0002530;9.17e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,6.26e-45,2;UBERON:0001044,8.40e-34,6;UBERON:0003293,8.40e-34,6;UBERON:0003294,8.40e-34,6;UBERON:0010047,8.40e-34,6;UBERON:0000167,8.40e-34,6;UBERON:0001831,1.67e-23,1;UBERON:0001567,1.67e-23,1;UBERON:0008801,1.67e-23,1;UBERON:0001736,2.62e-23,1;UBERON:0006298,2.62e-23,1;UBERON:0002372,6.40e-23,1;UBERON:0001961,6.40e-23,1;UBERON:0001744,6.40e-23,1;UBERON:0001735,6.40e-23,1;UBERON:0003408,1.28e-20,10;UBERON:0000166,1.92e-16,22;UBERON:0000161,1.64e-15,36;UBERON:0000165,1.39e-12,29;UBERON:0000930,1.39e-12,29;UBERON:0004089,1.85e-12,2;UBERON:0002365,6.76e-12,31;UBERON:0002330,6.76e-12,31;UBERON:0000310,7.74e-10,10;UBERON:0002530,1.33e-09,59;UBERON:0001443,5.00e-09,11;UBERON:0002114,1.40e-08,2;UBERON:0001444,1.35e-07,49;UBERON:0001911,6.50e-07,4;UBERON:0005333,6.50e-07,4;UBERON:0008425,6.50e-07,4;UBERON:0005311,6.50e-07,4 | |||
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|short_description=p7@CREB3L4 | |||
}} | }} |
Latest revision as of 08:01, 17 September 2015
Short description: | p7@CREB3L4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CREB3L4_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 1bp_to_ENST00000473340_5end |
EntrezGene: | CREB3L4 |
HGNC: | 18854 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 6.26e-45 | 2 |
saliva-secreting gland | 8.40e-34 | 6 |
gland of oral region | 8.40e-34 | 6 |
gland of foregut | 8.40e-34 | 6 |
oral gland | 8.40e-34 | 6 |
oral cavity | 8.40e-34 | 6 |
parotid gland | 1.67e-23 | 1 |
cheek | 1.67e-23 | 1 |
parotid gland primordium | 1.67e-23 | 1 |
submandibular gland | 2.62e-23 | 1 |
submandibular gland primordium | 2.62e-23 | 1 |
tonsil | 6.40e-23 | 1 |
mucosa-associated lymphoid tissue | 6.40e-23 | 1 |
lymphoid tissue | 6.40e-23 | 1 |
tonsillar ring | 6.40e-23 | 1 |
gland of gut | 1.28e-20 | 10 |
oral opening | 1.92e-16 | 22 |
orifice | 1.64e-15 | 36 |
mouth | 1.39e-12 | 29 |
stomodeum | 1.39e-12 | 29 |
midface | 1.85e-12 | 2 |
exocrine gland | 6.76e-12 | 31 |
exocrine system | 6.76e-12 | 31 |
breast | 7.74e-10 | 10 |
gland | 1.33e-09 | 59 |
chest | 5.00e-09 | 11 |
duodenum | 1.40e-08 | 2 |
subdivision of head | 1.35e-07 | 49 |
mammary gland | 6.50e-07 | 4 |
mammary bud | 6.50e-07 | 4 |
mammary ridge | 6.50e-07 | 4 |
mammary placode | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.60e-23 | 4 |
breast cancer | 4.60e-23 | 4 |