FFCP PHASE1:Hg19::chr9:95736796..95736808,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89846 | |EntrezGene=89846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16027 | |HGNC=16027 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_ENST00000494669_5end | |association_with_transcript=14bp_to_ENST00000494669_5end | ||
|cluster_id=chr9:95736796..95736808,+ | |||
|coexpression_cluster_id=C296 | |coexpression_cluster_id=C296 | ||
|description=CAGE_peak_11_at_FGD3_5end | |description=CAGE_peak_11_at_FGD3_5end | ||
|id=chr9:95736796..95736808,+ | |id=chr9:95736796..95736808,+ | ||
|ontology_enrichment_celltype=CL:0000039;2.55e-11;7!CL:0000586;2.55e-11;7!CL:1000415;1.43e-10;2!CL:0002535;1.72e-10;2!CL:0002097;2.72e-10;2!CL:0000174;2.79e-07;3 | |ontology_enrichment_celltype=CL:0002076!3.40e-11!43;CL:0000066!2.54e-09!254;CL:0000223!3.70e-09!59;CL:0002251!1.03e-07!21;CL:0000322!2.11e-07!3;CL:0000039!6.63e-07!7;CL:0000586!6.63e-07!7 | ||
| | |ontology_enrichment_celltype_v019=CL:0000039;2.55e-11;7!CL:0000586;2.55e-11;7!CL:1000415;1.43e-10;2!CL:0002535;1.72e-10;2!CL:0002097;2.72e-10;2!CL:0000174;2.79e-07;3 | ||
|ontology_enrichment_disease=DOID:170;6.50e-13;6!DOID:1749;3.07e-12;14!DOID:4074;2.72e-10;2!DOID:4905;2.72e-10;2!DOID:3498;2.72e-10;2!DOID:4556;2.79e-07;3 | |ontology_enrichment_celltype_v019_2=CL:0000039,2.42e-11,7;CL:0000586,2.42e-11,7;CL:1000415,1.43e-10,2;CL:0002535,1.72e-10,2;CL:0002097,2.99e-10,2;CL:0000174,2.97e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0006955;1.72e-10;2!UBERON:0004801;1.72e-10;2!UBERON:0006562;2.72e-10;2!UBERON:0002110;1.82e-07;3!UBERON:0002369;2.79e-07;3!UBERON:0001235;2.79e-07;3!UBERON:0006858;2.79e-07;3 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!3.56e-16!14;DOID:305!5.74e-15!106;DOID:0050687!9.34e-14!143;DOID:162!5.12e-07!235;DOID:14566!9.23e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:170;6.50e-13;6!DOID:1749;3.07e-12;14!DOID:4074;2.72e-10;2!DOID:4905;2.72e-10;2!DOID:3498;2.72e-10;2!DOID:4556;2.79e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:170,8.27e-13,6;DOID:1749,2.95e-12,14;DOID:0050687,5.83e-12,143;DOID:305,2.13e-10,106;DOID:4074,3.58e-10,2;DOID:4905,3.58e-10,2;DOID:3498,3.58e-10,2;DOID:4556,2.32e-07,3;DOID:162,6.03e-07,235;DOID:14566,8.76e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.15e-13!12;UBERON:0003343!3.27e-11!4;UBERON:0004785!3.27e-11!4;UBERON:0000060!8.75e-10!12;UBERON:0003350!4.03e-09!5;UBERON:0003729!4.64e-09!5;UBERON:0004923!1.08e-07!57;UBERON:0004119!1.65e-07!169;UBERON:0000925!1.65e-07!169;UBERON:0006595!1.65e-07!169;UBERON:0004821!2.11e-07!3;UBERON:0003215!2.11e-07!3;UBERON:0002299!2.11e-07!3;UBERON:0006524!2.11e-07!3;UBERON:0008874!2.11e-07!3;UBERON:0002169!2.11e-07!3;UBERON:0004894!2.11e-07!3;UBERON:0005911!4.46e-07!82;UBERON:0001007!9.87e-07!155;UBERON:0001555!9.87e-07!155;UBERON:0007026!9.87e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.72e-10;2!UBERON:0004801;1.72e-10;2!UBERON:0006562;2.72e-10;2!UBERON:0002110;1.82e-07;3!UBERON:0002369;2.79e-07;3!UBERON:0001235;2.79e-07;3!UBERON:0006858;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.72e-10,2;UBERON:0004801,1.72e-10,2;UBERON:0002110,1.82e-07,3;UBERON:0006242,1.82e-07,3;UBERON:0002369,2.97e-07,3;UBERON:0001235,2.97e-07,3;UBERON:0006858,2.97e-07,3 | |||
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|short_description=p11@FGD3 | |short_description=p11@FGD3 | ||
}} | }} |
Latest revision as of 08:03, 18 September 2015
Short description: | p11@FGD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_FGD3_5end |
Coexpression cluster: | C296_gall_small_mesothelioma_acute_bronchioalveolar_epidermoid_mixed |
Association with transcript: | 14bp_to_ENST00000494669_5end |
EntrezGene: | FGD3 |
HGNC: | 16027 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.42e-11 | 7 |
germ cell | 2.42e-11 | 7 |
epithelial cell of gall bladder | 1.43e-10 | 2 |
epithelial cell of cervix | 1.72e-10 | 2 |
cortical cell of adrenal gland | 2.99e-10 | 2 |
steroid hormone secreting cell | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.72e-10 | 2 |
cervix epithelium | 1.72e-10 | 2 |
gallbladder | 1.82e-07 | 3 |
gall bladder primordium | 1.82e-07 | 3 |
adrenal gland | 2.97e-07 | 3 |
adrenal cortex | 2.97e-07 | 3 |
adrenal/interrenal gland | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 8.27e-13 | 6 |
squamous cell carcinoma | 2.95e-12 | 14 |
cell type cancer | 5.83e-12 | 143 |
carcinoma | 2.13e-10 | 106 |
pancreas adenocarcinoma | 3.58e-10 | 2 |
pancreatic carcinoma | 3.58e-10 | 2 |
pancreatic ductal adenocarcinoma | 3.58e-10 | 2 |
lung large cell carcinoma | 2.32e-07 | 3 |
cancer | 6.03e-07 | 235 |
disease of cellular proliferation | 8.76e-07 | 239 |