FFCP PHASE1:Hg19::chr5:89825526..89825562,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116068 | |EntrezGene=116068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26969 | |HGNC=26969 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9N8,A8K613,Q7Z3D4 | |UniProt=G5E9N8,A8K613,Q7Z3D4 | ||
|association_with_transcript=-125bp_to_ENST00000453259,ENST00000509384,ENST00000554351,NM_198273,uc003kjr.2,uc003kjs.1,uc010jaz.1_5end | |association_with_transcript=-125bp_to_ENST00000453259,ENST00000509384,ENST00000554351,NM_198273,uc003kjr.2,uc003kjs.1,uc010jaz.1_5end | ||
|cluster_id=chr5:89825526..89825562,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_3_at_LYSMD3_5end | |description=CAGE_peak_3_at_LYSMD3_5end | ||
|id=chr5:89825526..89825562,- | |id=chr5:89825526..89825562,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.36e-20;82!UBERON:0006241;1.21e-11;3!UBERON:0003057;1.21e-11;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001893;1.78e-68;34!UBERON:0002780;1.22e-65;41!UBERON:0001890;1.22e-65;41!UBERON:0003528;1.66e-65;34!UBERON:0002020;1.66e-65;34!UBERON:0001869;1.87e-65;32!UBERON:0002791;2.28e-65;32!UBERON:0002619;9.35e-63;22!UBERON:0001950;1.63e-55;20!UBERON:0000956;6.53e-55;25!UBERON:0000203;6.53e-55;25!UBERON:0000073;1.81e-48;53!UBERON:0002616;1.81e-48;53!UBERON:0001017;5.19e-33;75!UBERON:0000955;4.96e-30;68!UBERON:0001016;8.90e-27;83!UBERON:0002420;1.08e-26;9!UBERON:0007245;1.08e-26;9!UBERON:0010009;1.08e-26;9!UBERON:0010011;1.08e-26;9!UBERON:0000454;1.08e-26;9!UBERON:0000125;6.49e-26;9!UBERON:0002308;6.49e-26;9!UBERON:0000200;4.47e-23;6!UBERON:0000349;5.44e-20;5!UBERON:0009663;1.42e-19;7!UBERON:0001871;2.66e-19;6!UBERON:0007023;1.53e-15;114!UBERON:0002784;3.58e-15;4!UBERON:0001894;1.77e-13;7!UBERON:0001870;7.43e-13;3!UBERON:0002021;1.36e-12;5!UBERON:0001872;2.01e-12;5!UBERON:0002240;1.21e-11;3!UBERON:0005174;1.21e-11;3!UBERON:0001137;1.21e-11;3!UBERON:0011216;6.56e-11;132!UBERON:0000369;6.68e-10;4!UBERON:0002435;6.68e-10;4!UBERON:0000204;6.68e-10;4!UBERON:0010314;1.77e-09;132!UBERON:0002702;4.18e-09;2!UBERON:0002771;5.51e-09;2!UBERON:0001876;5.51e-09;2!UBERON:0001954;5.51e-09;2!UBERON:0003022;5.51e-09;2!UBERON:0002421;5.51e-09;2!UBERON:0002600;5.51e-09;2!UBERON:0001897;8.96e-09;2!UBERON:0010225;8.96e-09;2!UBERON:0001875;1.96e-08;2!UBERON:0006514;1.96e-08;2!UBERON:0001905;4.21e-08;2!UBERON:0002148;4.21e-08;2!UBERON:0005162;4.21e-08;2!UBERON:0000122;4.21e-08;2!UBERON:0002757;4.21e-08;2!UBERON:0010134;4.21e-08;2!UBERON:0006331;4.21e-08;2!UBERON:0009662;4.21e-08;2!UBERON:0005408;4.21e-08;2!UBERON:0001899;4.21e-08;2 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.84e-39!57;UBERON:0005068!5.84e-39!57;UBERON:0006241!5.84e-39!57;UBERON:0007135!5.84e-39!57;UBERON:0000073!3.62e-37!94;UBERON:0001016!3.62e-37!94;UBERON:0001017!3.69e-36!82;UBERON:0005743!1.43e-35!86;UBERON:0000955!2.62e-33!69;UBERON:0006238!2.62e-33!69;UBERON:0002616!1.65e-32!59;UBERON:0002780!4.73e-32!41;UBERON:0001890!4.73e-32!41;UBERON:0006240!4.73e-32!41;UBERON:0003075!2.74e-31!86;UBERON:0007284!2.74e-31!86;UBERON:0003080!7.22e-31!42;UBERON:0002346!6.39e-30!90;UBERON:0007023!1.84e-27!115;UBERON:0001893!2.55e-26!34;UBERON:0002020!3.97e-26!34;UBERON:0003528!3.97e-26!34;UBERON:0002791!2.31e-25!33;UBERON:0001869!1.28e-24!32;UBERON:0003056!1.10e-23!61;UBERON:0004121!4.38e-20!169;UBERON:0000033!7.69e-20!123;UBERON:0000153!9.57e-20!129;UBERON:0007811!9.57e-20!129;UBERON:0000924!1.23e-19!173;UBERON:0006601!1.23e-19!173;UBERON:0000956!3.48e-18!25;UBERON:0000203!3.48e-18!25;UBERON:0002619!4.76e-18!22;UBERON:0001950!3.41e-16!20;UBERON:0002420!8.61e-10!9;UBERON:0007245!8.61e-10!9;UBERON:0010009!8.61e-10!9;UBERON:0010011!8.61e-10!9;UBERON:0000454!8.61e-10!9;UBERON:0002308!1.70e-09!9;UBERON:0000125!1.70e-09!9;UBERON:0003076!3.54e-09!15;UBERON:0003057!3.54e-09!15;UBERON:0009663!6.87e-08!7;UBERON:0004732!1.45e-07!13;UBERON:0000200!3.27e-07!6;UBERON:0001894!4.07e-07!7;UBERON:0006222!4.07e-07!7;UBERON:0004733!8.94e-07!12;UBERON:0002028!8.94e-07!12;UBERON:0007277!8.94e-07!12 | |||
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| ||
|short_description=p3@LYSMD3 | |short_description=p3@LYSMD3 | ||
}} | }} |
Latest revision as of 04:38, 19 September 2015
Short description: | p3@LYSMD3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LYSMD3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -125bp_to_ENST00000453259, ENST00000509384, ENST00000554351, NM_198273, uc003kjr.2, uc003kjs.1, uc010jaz.1_5end |
EntrezGene: | LYSMD3 |
HGNC: | 26969 |
UniProt: | G5E9N8A8K613Q7Z3D4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data