FFCP PHASE1:Hg19::chr17:46724682..46724718,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-297bp_to_ENST00000433510_5end | |association_with_transcript=-297bp_to_ENST00000433510_5end | ||
|cluster_id=chr17:46724682..46724718,- | |||
|description=CAGE_peak_2_at_ENST00000433510_5end | |description=CAGE_peak_2_at_ENST00000433510_5end | ||
|id=chr17:46724682..46724718,- | |id=chr17:46724682..46724718,- | ||
|ontology_enrichment_celltype=CL:1000507;1.38e-11;10!CL:1000494;1.38e-11;10!CL:1000497;1.34e-10;17!CL:0002518;1.34e-10;17!CL:1000449;1.15e-09;15 | |ontology_enrichment_celltype=CL:0000066!1.75e-18!254;CL:1000497!9.93e-10!18;CL:0002518!9.93e-10!18;CL:1000449!2.47e-09!16;CL:1000507!7.66e-09!12;CL:1000494!7.66e-09!12 | ||
| | |ontology_enrichment_celltype_v019=CL:1000507;1.38e-11;10!CL:1000494;1.38e-11;10!CL:1000497;1.34e-10;17!CL:0002518;1.34e-10;17!CL:1000449;1.15e-09;15 | ||
|ontology_enrichment_disease=DOID:1749;3.52e-08;14!DOID:0050687;8.48e-08;143!DOID:1324;8.93e-08;15!DOID:3905;1.86e-07;9!DOID:0050615;3.21e-07;16!DOID:305;4.54e-07;106 | |ontology_enrichment_celltype_v019_2=CL:0000066,4.45e-20,253;CL:1000507,1.88e-11,10;CL:1000494,1.88e-11,10;CL:1000497,1.57e-10,17;CL:0002518,1.57e-10,17;CL:1000449,1.48e-09,15 | ||
|ontology_enrichment_uberon=UBERON:0006554;5.70e-20;30!UBERON:0001008;5.70e-20;30!UBERON:0001737;1.13e-15;9!UBERON:0001557;1.13e-15;9!UBERON:0002113;7.10e-15;24!UBERON:0011143;7.10e-15;24!UBERON:0000489;5.78e-14;29!UBERON:0004211;1.38e-11;10!UBERON:0009773;1.38e-11;10!UBERON:0001231;1.38e-11;10!UBERON:0004810;1.38e-11;10!UBERON:0005910;2.10e-10;6!UBERON:0000072;7.50e-10;37!UBERON:0006555;1.15e-09;15!UBERON:0004819;1.15e-09;15!UBERON:0001285;1.15e-09;15!UBERON:0007684;1.15e-09;15!UBERON:0000065;1.54e-08;44!UBERON:0005911;3.77e-08;36!UBERON:0000365;3.83e-08;5!UBERON:0005172;1.31e-07;52!UBERON:0005173;1.31e-07;52!UBERON:0001851;1.81e-07;15!UBERON:0000486;4.94e-07;12 | |ontology_enrichment_development_v019=UBERON:0008947;8.90e-16;29!UBERON:0003918;1.59e-08;10!UBERON:0007687;1.59e-08;10 | ||
|ontology_enrichment_disease=DOID:305!3.12e-31!106;DOID:0050687!3.49e-31!143;DOID:162!4.09e-23!235;DOID:14566!6.46e-23!239;DOID:1749!4.47e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.52e-08;14!DOID:0050687;8.48e-08;143!DOID:1324;8.93e-08;15!DOID:3905;1.86e-07;9!DOID:0050615;3.21e-07;16!DOID:305;4.54e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.25e-30,143;DOID:305,8.85e-27,106;DOID:162,5.12e-21,235;DOID:14566,2.76e-20,239;DOID:1749,3.12e-08,14;DOID:1324,7.62e-08,15;DOID:3905,1.84e-07,9;DOID:0050615,2.77e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0006554!6.51e-17!44;UBERON:0000489!9.57e-17!32;UBERON:0001008!2.38e-16!45;UBERON:0002417!3.69e-14!61;UBERON:0000916!3.69e-14!61;UBERON:0000058!5.69e-14!26;UBERON:0002113!8.80e-14!27;UBERON:0003918!8.80e-14!27;UBERON:0005095!8.80e-14!27;UBERON:0007687!8.80e-14!27;UBERON:0001737!2.71e-12!9;UBERON:0005177!1.39e-11!107;UBERON:0000080!2.38e-11!18;UBERON:0002120!2.38e-11!18;UBERON:0004875!2.38e-11!18;UBERON:0005721!2.38e-11!18;UBERON:0005754!2.38e-11!18;UBERON:0007297!2.38e-11!18;UBERON:0005172!4.66e-11!55;UBERON:0005173!4.66e-11!55;UBERON:0003064!8.00e-11!37;UBERON:0003886!1.11e-10!63;UBERON:0003887!1.47e-10!21;UBERON:0004921!2.47e-10!129;UBERON:0004185!2.47e-10!129;UBERON:0006555!3.14e-10!17;UBERON:0005103!3.14e-10!17;UBERON:0000083!3.14e-10!17;UBERON:0009201!3.14e-10!17;UBERON:0004819!3.14e-10!17;UBERON:0006553!3.14e-10!17;UBERON:0003074!3.14e-10!17;UBERON:0003060!3.14e-10!17;UBERON:0004119!4.10e-10!169;UBERON:0000925!4.10e-10!169;UBERON:0006595!4.10e-10!169;UBERON:0009569!4.63e-10!113;UBERON:0004876!7.41e-10!20;UBERON:0000466!2.19e-09!126;UBERON:0004211!2.47e-09!16;UBERON:0001285!2.47e-09!16;UBERON:0007684!2.47e-09!16;UBERON:0003220!2.47e-09!16;UBERON:0004208!2.47e-09!16;UBERON:0003104!2.48e-09!238;UBERON:0009142!2.48e-09!238;UBERON:0000464!3.43e-09!104;UBERON:0001007!5.47e-09!155;UBERON:0001555!5.47e-09!155;UBERON:0007026!5.47e-09!155;UBERON:0000077!5.59e-09!130;UBERON:0009773!7.66e-09!12;UBERON:0001231!7.66e-09!12;UBERON:0004810!7.66e-09!12;UBERON:0002553!7.70e-09!70;UBERON:0005910!8.57e-09!6;UBERON:0008947!2.44e-08!38;UBERON:0003258!2.44e-08!38;UBERON:0001851!1.26e-07!16;UBERON:0000072!1.32e-07!46;UBERON:0000365!2.10e-07!5;UBERON:0000063!5.30e-07!97;UBERON:0001041!5.85e-07!98;UBERON:0001557!7.26e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;5.70e-20;30!UBERON:0001008;5.70e-20;30!UBERON:0001737;1.13e-15;9!UBERON:0001557;1.13e-15;9!UBERON:0002113;7.10e-15;24!UBERON:0011143;7.10e-15;24!UBERON:0000489;5.78e-14;29!UBERON:0004211;1.38e-11;10!UBERON:0009773;1.38e-11;10!UBERON:0001231;1.38e-11;10!UBERON:0004810;1.38e-11;10!UBERON:0005910;2.10e-10;6!UBERON:0000072;7.50e-10;37!UBERON:0006555;1.15e-09;15!UBERON:0004819;1.15e-09;15!UBERON:0001285;1.15e-09;15!UBERON:0007684;1.15e-09;15!UBERON:0000065;1.54e-08;44!UBERON:0005911;3.77e-08;36!UBERON:0000365;3.83e-08;5!UBERON:0005172;1.31e-07;52!UBERON:0005173;1.31e-07;52!UBERON:0001851;1.81e-07;15!UBERON:0000486;4.94e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.08e-16,9;UBERON:0002113,1.06e-15,26;UBERON:0003918,1.06e-15,26;UBERON:0011143,1.06e-15,26;UBERON:0005095,1.06e-15,26;UBERON:0007687,1.06e-15,26;UBERON:0000489,8.40e-15,31;UBERON:0006554,2.12e-14,47;UBERON:0001008,5.34e-14,48;UBERON:0005177,1.43e-12,101;UBERON:0002417,1.43e-11,60;UBERON:0000916,1.43e-11,60;UBERON:0004810,1.88e-11,10;UBERON:0008947,2.59e-11,38;UBERON:0003258,2.59e-11,38;UBERON:0005172,1.01e-10,54;UBERON:0005173,1.01e-10,54;UBERON:0005910,2.29e-10,6;UBERON:0004211,1.48e-09,15;UBERON:0009773,1.48e-09,15;UBERON:0001231,1.48e-09,15;UBERON:0001285,1.48e-09,15;UBERON:0007684,1.48e-09,15;UBERON:0004208,1.48e-09,15;UBERON:0009569,1.88e-09,112;UBERON:0006555,7.15e-09,16;UBERON:0004819,7.15e-09,16;UBERON:0000072,1.77e-08,47;UBERON:0000365,4.07e-08,5;UBERON:0001851,2.01e-07,15;UBERON:0004119,3.30e-07,160;UBERON:0000925,3.30e-07,160;UBERON:0006595,3.30e-07,160;UBERON:0004921,5.07e-07,118;UBERON:0000065,6.01e-07,54;UBERON:0001557,7.98e-07,19 | |||
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|short_description=p2@ENST00000433510 | |short_description=p2@ENST00000433510 | ||
}} | }} |
Latest revision as of 18:13, 25 July 2015
Short description: | p2@ENST00000433510 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000433510_5end |
Coexpression cluster: | NA |
Association with transcript: | -297bp_to_ENST00000433510_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.45e-20 | 253 |
kidney tubule cell | 1.88e-11 | 10 |
nephron tubule epithelial cell | 1.88e-11 | 10 |
kidney cell | 1.57e-10 | 17 |
kidney epithelial cell | 1.57e-10 | 17 |
epithelial cell of nephron | 1.48e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.25e-30 | 143 |
carcinoma | 8.85e-27 | 106 |
cancer | 5.12e-21 | 235 |
disease of cellular proliferation | 2.76e-20 | 239 |
squamous cell carcinoma | 3.12e-08 | 14 |
lung cancer | 7.62e-08 | 15 |
lung carcinoma | 1.84e-07 | 9 |
respiratory system cancer | 2.77e-07 | 16 |