FFCP PHASE1:Hg19::chr19:38085739..38085762,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163255 | |EntrezGene=163255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25331 | |HGNC=25331 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NDQ6 | |UniProt=Q8NDQ6 | ||
|association_with_transcript=8bp_to_ENST00000316433,ENST00000343599,NM_001172225,NM_001172226_5end | |association_with_transcript=8bp_to_ENST00000316433,ENST00000343599,NM_001172225,NM_001172226_5end | ||
|cluster_id=chr19:38085739..38085762,+ | |||
|coexpression_cluster_id=C652 | |coexpression_cluster_id=C652 | ||
|description=CAGE_peak_3_at_ZNF540_5end | |description=CAGE_peak_3_at_ZNF540_5end | ||
|id=chr19:38085739..38085762,+ | |id=chr19:38085739..38085762,+ | ||
|ontology_enrichment_celltype=CL:0000791;6.36e-22;18!CL:0000789;6.36e-22;18!CL:0002419;6.36e-22;18!CL:0000084;1.30e-14;25!CL:0000625;2.55e-13;11!CL:0000624;4.28e-12;6!CL:0000226;7.80e-07;3!CL:0000842;7.80e-07;3 | |ontology_enrichment_celltype=CL:0000791!7.17e-13!18;CL:0000789!7.17e-13!18;CL:0002420!7.17e-13!18;CL:0002419!7.17e-13!18;CL:0000790!7.17e-13!18;CL:0000838!7.77e-12!52;CL:0000542!2.30e-11!53;CL:0000051!2.30e-11!53;CL:0000084!2.72e-10!25;CL:0000827!2.72e-10!25;CL:0000625!2.29e-09!11 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;6.36e-22;18!CL:0000789;6.36e-22;18!CL:0002419;6.36e-22;18!CL:0000084;1.30e-14;25!CL:0000625;2.55e-13;11!CL:0000624;4.28e-12;6!CL:0000226;7.80e-07;3!CL:0000842;7.80e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.01e-22,18;CL:0000789,6.01e-22,18;CL:0002420,6.01e-22,18;CL:0002419,6.01e-22,18;CL:0000790,6.01e-22,18;CL:0000084,1.25e-14,25;CL:0000827,1.25e-14,25;CL:0000625,2.66e-13,11;CL:0000624,3.78e-12,6;CL:0000838,6.82e-10,52;CL:0000542,1.31e-09,53;CL:0000051,1.31e-09,53;CL:0000226,6.48e-07,3;CL:0000842,6.48e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;6.36e-22;18!UBERON:0006601;8.59e-14;82!UBERON:0006215;7.29e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002780;4.18e-42;41!UBERON:0001890;4.18e-42;41!UBERON:0001893;2.17e-41;34!UBERON:0002791;1.39e-40;32!UBERON:0001869;1.39e-40;32!UBERON:0002619;4.66e-39;22!UBERON:0003528;1.75e-38;34!UBERON:0002020;1.75e-38;34!UBERON:0000073;3.92e-38;53!UBERON:0002616;3.92e-38;53!UBERON:0001950;2.09e-35;20!UBERON:0000956;9.85e-34;25!UBERON:0000203;9.85e-34;25!UBERON:0000955;3.05e-24;68!UBERON:0001017;2.83e-23;75!UBERON:0001016;2.34e-20;83!UBERON:0002420;1.05e-16;9!UBERON:0007245;1.05e-16;9!UBERON:0010009;1.05e-16;9!UBERON:0010011;1.05e-16;9!UBERON:0000454;1.05e-16;9!UBERON:0009663;2.48e-13;7!UBERON:0000125;6.53e-13;9!UBERON:0002308;6.53e-13;9!UBERON:0000200;2.03e-12;6!UBERON:0007023;2.37e-12;114!UBERON:0004732;3.30e-11;13!UBERON:0002021;9.01e-11;5!UBERON:0001894;1.21e-10;7!UBERON:0001872;1.46e-10;5!UBERON:0000349;2.43e-10;5!UBERON:0001871;2.62e-10;6!UBERON:0003296;1.62e-09;4!UBERON:0010133;1.62e-09;4!UBERON:0004733;1.66e-09;12!UBERON:0002028;1.66e-09;12!UBERON:0000369;2.39e-08;4!UBERON:0002435;2.39e-08;4!UBERON:0000204;2.39e-08;4!UBERON:0002298;2.07e-07;6!UBERON:0001870;5.65e-07;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.71e-54!115;UBERON:0001049!3.07e-30!57;UBERON:0005068!3.07e-30!57;UBERON:0006241!3.07e-30!57;UBERON:0007135!3.07e-30!57;UBERON:0002780!1.88e-25!41;UBERON:0001890!1.88e-25!41;UBERON:0006240!1.88e-25!41;UBERON:0002616!3.06e-25!59;UBERON:0003080!1.92e-24!42;UBERON:0000955!1.13e-21!69;UBERON:0006238!1.13e-21!69;UBERON:0001893!1.58e-21!34;UBERON:0002020!2.39e-21!34;UBERON:0003528!2.39e-21!34;UBERON:0001017!7.79e-21!82;UBERON:0002791!1.08e-20!33;UBERON:0001869!4.35e-20!32;UBERON:0005743!6.55e-20!86;UBERON:0003075!3.12e-19!86;UBERON:0007284!3.12e-19!86;UBERON:0002619!4.19e-18!22;UBERON:0002346!4.88e-18!90;UBERON:0000073!1.56e-17!94;UBERON:0001016!1.56e-17!94;UBERON:0001950!1.53e-16!20;UBERON:0000956!8.06e-15!25;UBERON:0000203!8.06e-15!25;UBERON:0003056!1.26e-13!61;UBERON:0000153!7.17e-11!129;UBERON:0007811!7.17e-11!129;UBERON:0000033!1.55e-09!123;UBERON:0002420!1.94e-08!9;UBERON:0007245!1.94e-08!9;UBERON:0010009!1.94e-08!9;UBERON:0010011!1.94e-08!9;UBERON:0000454!1.94e-08!9;UBERON:0002308!4.08e-08!9;UBERON:0000125!4.08e-08!9;UBERON:0003076!4.56e-07!15;UBERON:0003057!4.56e-07!15;UBERON:0004121!5.27e-07!169;UBERON:0009663!6.77e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.18e-42;41!UBERON:0001890;4.18e-42;41!UBERON:0001893;2.17e-41;34!UBERON:0002791;1.39e-40;32!UBERON:0001869;1.39e-40;32!UBERON:0002619;4.66e-39;22!UBERON:0003528;1.75e-38;34!UBERON:0002020;1.75e-38;34!UBERON:0000073;3.92e-38;53!UBERON:0002616;3.92e-38;53!UBERON:0001950;2.09e-35;20!UBERON:0000956;9.85e-34;25!UBERON:0000203;9.85e-34;25!UBERON:0000955;3.05e-24;68!UBERON:0001017;2.83e-23;75!UBERON:0001016;2.34e-20;83!UBERON:0002420;1.05e-16;9!UBERON:0007245;1.05e-16;9!UBERON:0010009;1.05e-16;9!UBERON:0010011;1.05e-16;9!UBERON:0000454;1.05e-16;9!UBERON:0009663;2.48e-13;7!UBERON:0000125;6.53e-13;9!UBERON:0002308;6.53e-13;9!UBERON:0000200;2.03e-12;6!UBERON:0007023;2.37e-12;114!UBERON:0004732;3.30e-11;13!UBERON:0002021;9.01e-11;5!UBERON:0001894;1.21e-10;7!UBERON:0001872;1.46e-10;5!UBERON:0000349;2.43e-10;5!UBERON:0001871;2.62e-10;6!UBERON:0003296;1.62e-09;4!UBERON:0010133;1.62e-09;4!UBERON:0004733;1.66e-09;12!UBERON:0002028;1.66e-09;12!UBERON:0000369;2.39e-08;4!UBERON:0002435;2.39e-08;4!UBERON:0000204;2.39e-08;4!UBERON:0002298;2.07e-07;6!UBERON:0001870;5.65e-07;3 | |||
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| ||
|short_description=p3@ZNF540 | |short_description=p3@ZNF540 | ||
}} | }} |
Latest revision as of 18:15, 17 September 2015
Short description: | p3@ZNF540 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNF540_5end |
Coexpression cluster: | C652_cerebellum_occipital_pineal_pituitary_medial_parietal_amygdala |
Association with transcript: | 8bp_to_ENST00000316433, ENST00000343599, NM_001172225, NM_001172226_5end |
EntrezGene: | ZNF540 |
HGNC: | 25331 |
UniProt: | Q8NDQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.01e-22 | 18 |
alpha-beta T cell | 6.01e-22 | 18 |
immature T cell | 6.01e-22 | 18 |
mature T cell | 6.01e-22 | 18 |
immature alpha-beta T cell | 6.01e-22 | 18 |
T cell | 1.25e-14 | 25 |
pro-T cell | 1.25e-14 | 25 |
CD8-positive, alpha-beta T cell | 2.66e-13 | 11 |
CD4-positive, alpha-beta T cell | 3.78e-12 | 6 |
lymphoid lineage restricted progenitor cell | 6.82e-10 | 52 |
lymphocyte | 1.31e-09 | 53 |
common lymphoid progenitor | 1.31e-09 | 53 |
single nucleate cell | 6.48e-07 | 3 |
mononuclear cell | 6.48e-07 | 3 |