FFCP PHASE1:Hg19::chr20:23065602..23065628,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:23065602..23065628,- | |||
|coexpression_cluster_id=C3834 | |coexpression_cluster_id=C3834 | ||
|description=CAGE_peak_at_chr20:23065602..23065628,- | |description=CAGE_peak_at_chr20:23065602..23065628,- | ||
|id=chr20:23065602..23065628,- | |id=chr20:23065602..23065628,- | ||
|ontology_enrichment_celltype=CL:0002139;1.47e-42;24!CL:0000115;2.14e-40;36!CL:0000071;1.41e-25;18!CL:0002078;2.04e-23;45!CL:0002543;1.18e-21;6!CL:0002138;4.73e-20;6!CL:0000213;5.34e-17;58!CL:0000215;5.34e-17;58!CL:0002618;8.68e-12;3!CL:0002188;1.07e-11;5!CL:0002144;4.79e-11;3!CL:1000746;2.42e-08;7!CL:1000612;2.42e-08;7!CL:0002262;3.93e-08;2!CL:1000398;3.93e-08;2 | |ontology_enrichment_celltype=CL:0002139!7.97e-25!24;CL:0000115!9.64e-25!35;CL:0002078!4.55e-19!44;CL:0000071!8.05e-17!18;CL:0002546!8.05e-17!18;CL:0000213!1.27e-12!57;CL:0000215!1.27e-12!57;CL:0002543!1.61e-10!6;CL:0005020!7.56e-10!6;CL:0002138!7.56e-10!6;CL:0005022!7.56e-10!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0002139;1.47e-42;24!CL:0000115;2.14e-40;36!CL:0000071;1.41e-25;18!CL:0002078;2.04e-23;45!CL:0002543;1.18e-21;6!CL:0002138;4.73e-20;6!CL:0000213;5.34e-17;58!CL:0000215;5.34e-17;58!CL:0002618;8.68e-12;3!CL:0002188;1.07e-11;5!CL:0002144;4.79e-11;3!CL:1000746;2.42e-08;7!CL:1000612;2.42e-08;7!CL:0002262;3.93e-08;2!CL:1000398;3.93e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,7.54e-50,36;CL:0002139,1.47e-42,24;CL:0002078,1.60e-38,45;CL:0000213,2.19e-28,58;CL:0000215,2.19e-28,58;CL:0000071,1.66e-25,18;CL:0002546,1.66e-25,18;CL:0002543,1.15e-21,6;CL:0005020,3.71e-20,6;CL:0002138,3.71e-20,6;CL:0005022,3.71e-20,6;CL:0002618,8.71e-12,3;CL:0002188,1.11e-11,5;CL:0002144,5.31e-11,3;CL:0000222,2.58e-10,121;CL:1000746,2.50e-08,7;CL:1000612,2.50e-08,7;CL:0002262,3.80e-08,2;CL:1000398,3.80e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.41e-25;18!CL:0005022;4.73e-20;6!UBERON:0005062;1.51e-07;4!UBERON:0007284;1.51e-07;4!UBERON:0004872;3.23e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004638;1.41e-25;18!UBERON:0001986;1.41e-25;18!UBERON:0004852;1.41e-25;18!UBERON:0000487;2.17e-20;22!UBERON:0001638;1.28e-18;9!UBERON:0003920;1.28e-18;9!UBERON:0004582;1.28e-18;9!UBERON:0006914;1.36e-17;25!UBERON:0002465;9.60e-16;10!UBERON:0001473;7.38e-15;8!UBERON:0004536;7.38e-15;8!UBERON:0006558;7.38e-15;8!UBERON:0000490;3.33e-11;33!UBERON:0000055;3.50e-11;65!UBERON:0010523;4.79e-11;3!UBERON:0001915;4.79e-11;3!UBERON:0001982;4.79e-11;3!UBERON:0004151;3.48e-10;3!UBERON:0003978;6.36e-10;3!UBERON:0000946;6.36e-10;3!UBERON:0000074;2.42e-08;7!UBERON:0001229;2.42e-08;7!UBERON:0001281;3.93e-08;2!UBERON:0003497;3.93e-08;2!UBERON:0003909;3.93e-08;2!UBERON:0003835;3.93e-08;2!UBERON:0000353;6.10e-08;15!UBERON:0002081;1.61e-07;2!UBERON:0001009;2.12e-07;112!UBERON:0003127;2.98e-07;2!UBERON:0002133;2.98e-07;2!UBERON:0002066;3.37e-07;5!UBERON:0007500;4.83e-07;56!UBERON:0001981;4.83e-07;56!UBERON:0004537;4.83e-07;56 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.60e-24!115;UBERON:0001986!8.05e-17!18;UBERON:0004638!8.05e-17!18;UBERON:0004852!8.05e-17!18;UBERON:0000487!7.49e-13!22;UBERON:0006914!4.55e-12!25;UBERON:0000055!2.18e-11!69;UBERON:0001009!5.89e-10!113;UBERON:0004872!1.45e-09!84;UBERON:0002465!5.42e-09!10;UBERON:0002049!8.14e-09!79;UBERON:0007798!8.14e-09!79;UBERON:0001638!1.19e-08!9;UBERON:0003920!1.19e-08!9;UBERON:0004582!1.19e-08!9;UBERON:0003081!1.73e-08!216;UBERON:0004535!2.32e-08!110;UBERON:0001981!7.84e-08!60;UBERON:0007500!7.84e-08!60;UBERON:0004537!7.84e-08!60;UBERON:0006965!7.84e-08!60;UBERON:0004111!1.18e-07!241;UBERON:0000477!2.32e-07!286;UBERON:0001473!4.61e-07!8;UBERON:0004536!4.61e-07!8;UBERON:0006558!4.61e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.41e-25;18!UBERON:0001986;1.41e-25;18!UBERON:0004852;1.41e-25;18!UBERON:0000487;2.17e-20;22!UBERON:0001638;1.28e-18;9!UBERON:0003920;1.28e-18;9!UBERON:0004582;1.28e-18;9!UBERON:0006914;1.36e-17;25!UBERON:0002465;9.60e-16;10!UBERON:0001473;7.38e-15;8!UBERON:0004536;7.38e-15;8!UBERON:0006558;7.38e-15;8!UBERON:0000490;3.33e-11;33!UBERON:0000055;3.50e-11;65!UBERON:0010523;4.79e-11;3!UBERON:0001915;4.79e-11;3!UBERON:0001982;4.79e-11;3!UBERON:0004151;3.48e-10;3!UBERON:0003978;6.36e-10;3!UBERON:0000946;6.36e-10;3!UBERON:0000074;2.42e-08;7!UBERON:0001229;2.42e-08;7!UBERON:0001281;3.93e-08;2!UBERON:0003497;3.93e-08;2!UBERON:0003909;3.93e-08;2!UBERON:0003835;3.93e-08;2!UBERON:0000353;6.10e-08;15!UBERON:0002081;1.61e-07;2!UBERON:0001009;2.12e-07;112!UBERON:0003127;2.98e-07;2!UBERON:0002133;2.98e-07;2!UBERON:0002066;3.37e-07;5!UBERON:0007500;4.83e-07;56!UBERON:0001981;4.83e-07;56!UBERON:0004537;4.83e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.66e-25,18;UBERON:0001986,1.66e-25,18;UBERON:0004852,1.66e-25,18;UBERON:0000055,1.47e-22,68;UBERON:0000487,2.46e-20,22;UBERON:0002049,7.62e-19,78;UBERON:0007798,7.62e-19,78;UBERON:0001638,1.48e-18,9;UBERON:0003920,1.48e-18,9;UBERON:0004582,1.48e-18,9;UBERON:0001009,1.26e-17,112;UBERON:0006914,1.52e-17,25;UBERON:0002465,8.23e-16,10;UBERON:0004535,1.60e-15,109;UBERON:0004872,2.50e-15,83;UBERON:0001473,6.17e-15,8;UBERON:0004536,6.17e-15,8;UBERON:0006558,6.17e-15,8;UBERON:0007500,4.00e-14,59;UBERON:0001981,4.00e-14,59;UBERON:0004537,4.00e-14,59;UBERON:0006965,4.00e-14,59;UBERON:0003914,9.24e-13,117;UBERON:0010523,5.31e-11,3;UBERON:0001915,5.31e-11,3;UBERON:0001982,5.31e-11,3;UBERON:0004111,1.35e-10,240;UBERON:0004151,1.86e-10,3;UBERON:0003978,5.36e-10,3;UBERON:0009751,5.36e-10,3;UBERON:0000946,5.36e-10,3;UBERON:0002523,5.36e-10,3;UBERON:0005983,5.36e-10,3;UBERON:0002165,5.36e-10,3;UBERON:0002062,5.36e-10,3;UBERON:0007280,5.36e-10,3;UBERON:0010532,2.50e-08,7;UBERON:0000074,2.50e-08,7;UBERON:0001229,2.50e-08,7;UBERON:0001230,2.50e-08,7;UBERON:0003220,2.50e-08,7;UBERON:0005749,2.50e-08,7;UBERON:0004199,2.50e-08,7;UBERON:0004209,2.50e-08,7;UBERON:0004198,2.50e-08,7;UBERON:0003103,2.78e-08,68;UBERON:0001281,3.80e-08,2;UBERON:0003497,3.80e-08,2;UBERON:0003909,3.80e-08,2;UBERON:0003835,3.80e-08,2;UBERON:0000353,6.15e-08,15;UBERON:0002081,1.24e-07,2;UBERON:0010227,1.24e-07,2;UBERON:0002133,2.38e-07,2;UBERON:0000025,2.72e-07,192;UBERON:0005103,2.80e-07,8;UBERON:0000083,2.80e-07,8;UBERON:0009201,2.80e-07,8;UBERON:0006553,2.80e-07,8;UBERON:0003074,2.80e-07,8;UBERON:0003060,2.80e-07,8;UBERON:0003127,3.19e-07,2;UBERON:0002066,3.37e-07,5;UBERON:0003887,4.36e-07,12 | |||
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| ||
|short_description=p@chr20:23065602..23065628,- | |short_description=p@chr20:23065602..23065628,- | ||
}} | }} |
Latest revision as of 12:29, 28 July 2015
Short description: | p@chr20:23065602..23065628, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:23065602..23065628, - |
Coexpression cluster: | C3834_Endothelial_Hepatic_Renal_Lymphatic_mature_lung_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 7.54e-50 | 36 |
endothelial cell of vascular tree | 1.47e-42 | 24 |
meso-epithelial cell | 1.60e-38 | 45 |
lining cell | 2.19e-28 | 58 |
barrier cell | 2.19e-28 | 58 |
blood vessel endothelial cell | 1.66e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.66e-25 | 18 |
vein endothelial cell | 1.15e-21 | 6 |
lymphangioblast | 3.71e-20 | 6 |
endothelial cell of lymphatic vessel | 3.71e-20 | 6 |
vascular lymphangioblast | 3.71e-20 | 6 |
endothelial cell of umbilical vein | 8.71e-12 | 3 |
glomerular endothelial cell | 1.11e-11 | 5 |
capillary endothelial cell | 5.31e-11 | 3 |
mesodermal cell | 2.58e-10 | 121 |
glomerular cell | 2.50e-08 | 7 |
kidney corpuscule cell | 2.50e-08 | 7 |
endothelial cell of sinusoid | 3.80e-08 | 2 |
endothelial cell of hepatic sinusoid | 3.80e-08 | 2 |