FFCP PHASE1:Hg19::chr19:7939247..7939286,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:7939247..7939286,-
|short_description=p1@FLJ22184
|description=CAGE_peak_1_at_FLJ22184_5end
|association_with_transcript=39bp_to_ENST00000539422,NM_001190...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80164 | |EntrezGene=80164 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=F5H1R7 | |UniProt=F5H1R7 | ||
|association_with_transcript=39bp_to_ENST00000539422,NM_001190467,uc002mip.2_5end | |||
|cluster_id=chr19:7939247..7939286,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_FLJ22184_5end | |||
|id=chr19:7939247..7939286,- | |||
|ontology_enrichment_celltype=CL:0002319!8.02e-10!25;CL:0000047!4.21e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;9.98e-11;25!CL:0000540;1.14e-08;6!CL:0000404;1.14e-08;6!CL:0002321;1.61e-07;15!CL:0000333;1.86e-07;5!CL:0002322;9.52e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.55e-11,8;CL:0002319,1.05e-10,25;CL:0000540,1.24e-08,6;CL:0000031,1.24e-08,6;CL:0000404,1.24e-08,6;CL:0000133,2.35e-07,59;CL:0002322,8.56e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.22e-16;82!CL:0000031;1.14e-08;6!UBERON:0006238;4.22e-07;10 | |||
|ontology_enrichment_disease=DOID:0050687!7.84e-15!143;DOID:305!5.95e-10!106;DOID:3095!3.34e-09!22;DOID:2994!3.34e-09!22;DOID:171!1.41e-08!10;DOID:162!3.51e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:171;3.54e-10;10!DOID:169;1.41e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.26e-10,10;DOID:0050687,7.64e-09,143;DOID:169,1.42e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.36e-53!94;UBERON:0001016!2.36e-53!94;UBERON:0005743!8.08e-53!86;UBERON:0001017!2.60e-50!82;UBERON:0001049!8.13e-43!57;UBERON:0005068!8.13e-43!57;UBERON:0006241!8.13e-43!57;UBERON:0007135!8.13e-43!57;UBERON:0002346!1.18e-42!90;UBERON:0003075!4.39e-40!86;UBERON:0007284!4.39e-40!86;UBERON:0000955!8.89e-40!69;UBERON:0006238!8.89e-40!69;UBERON:0002780!1.67e-35!41;UBERON:0001890!1.67e-35!41;UBERON:0006240!1.67e-35!41;UBERON:0002616!3.43e-35!59;UBERON:0003080!3.20e-34!42;UBERON:0000924!7.50e-33!173;UBERON:0006601!7.50e-33!173;UBERON:0003056!2.56e-31!61;UBERON:0001893!9.17e-31!34;UBERON:0002020!1.06e-30!34;UBERON:0003528!1.06e-30!34;UBERON:0004121!1.21e-30!169;UBERON:0002791!8.60e-30!33;UBERON:0001869!9.79e-30!32;UBERON:0000033!6.22e-26!123;UBERON:0000153!2.10e-25!129;UBERON:0007811!2.10e-25!129;UBERON:0000956!4.74e-24!25;UBERON:0000203!4.74e-24!25;UBERON:0007023!7.42e-23!115;UBERON:0002619!1.08e-22!22;UBERON:0001950!7.58e-21!20;UBERON:0000025!5.81e-13!194;UBERON:0000064!1.15e-12!219;UBERON:0000475!7.77e-12!365;UBERON:0000483!9.92e-12!309;UBERON:0000119!2.78e-11!312;UBERON:0000481!2.32e-10!347;UBERON:0004111!8.73e-10!241;UBERON:0003076!1.13e-09!15;UBERON:0003057!1.13e-09!15;UBERON:0000477!9.72e-09!286;UBERON:0001871!1.14e-08!7;UBERON:0002420!1.83e-08!9;UBERON:0007245!1.83e-08!9;UBERON:0010009!1.83e-08!9;UBERON:0010011!1.83e-08!9;UBERON:0000454!1.83e-08!9;UBERON:0000062!2.08e-08!511;UBERON:0000922!4.25e-08!612;UBERON:0002308!4.40e-08!9;UBERON:0000125!4.40e-08!9;UBERON:0004733!1.23e-07!12;UBERON:0002028!1.23e-07!12;UBERON:0007277!1.23e-07!12;UBERON:0000200!3.99e-07!6;UBERON:0004732!8.77e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.39e-37;32!UBERON:0001893;1.10e-36;34!UBERON:0003528;1.21e-36;34!UBERON:0002020;1.21e-36;34!UBERON:0002791;2.17e-36;32!UBERON:0002780;6.90e-35;41!UBERON:0001890;6.90e-35;41!UBERON:0002619;1.03e-32;22!UBERON:0000956;1.16e-32;25!UBERON:0000203;1.16e-32;25!UBERON:0000073;5.45e-31;53!UBERON:0002616;5.45e-31;53!UBERON:0001950;5.39e-30;20!UBERON:0001017;1.21e-24;75!UBERON:0000955;1.57e-24;68!UBERON:0001016;8.18e-24;83!UBERON:0002420;7.37e-12;9!UBERON:0007245;7.37e-12;9!UBERON:0010009;7.37e-12;9!UBERON:0010011;7.37e-12;9!UBERON:0000454;7.37e-12;9!UBERON:0000125;2.93e-11;9!UBERON:0002308;2.93e-11;9!UBERON:0001871;8.98e-11;6!UBERON:0011216;4.17e-10;132!UBERON:0000200;9.60e-10;6!UBERON:0009663;4.36e-09;7!UBERON:0001872;1.59e-08;5!UBERON:0002021;1.61e-08;5!UBERON:0000349;1.62e-08;5!UBERON:0004733;4.02e-08;12!UBERON:0002028;4.02e-08;12!UBERON:0002298;6.38e-08;6!UBERON:0000013;1.86e-07;5!UBERON:0002410;1.86e-07;5!UBERON:0004732;2.47e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.55e-69,89;UBERON:0001017,1.64e-67,81;UBERON:0001049,3.76e-57,56;UBERON:0005068,3.76e-57,56;UBERON:0006241,3.76e-57,56;UBERON:0007135,3.76e-57,56;UBERON:0000073,7.27e-54,53;UBERON:0002616,7.27e-54,53;UBERON:0000955,9.08e-54,68;UBERON:0006238,9.08e-54,68;UBERON:0002780,1.69e-47,41;UBERON:0001890,1.69e-47,41;UBERON:0003080,1.69e-47,41;UBERON:0006240,1.69e-47,41;UBERON:0002346,3.90e-45,86;UBERON:0003075,6.12e-43,82;UBERON:0007284,6.12e-43,82;UBERON:0001893,1.51e-42,34;UBERON:0003528,1.85e-42,34;UBERON:0002020,1.85e-42,34;UBERON:0001869,5.21e-41,32;UBERON:0002791,3.72e-40,32;UBERON:0004121,6.39e-38,171;UBERON:0000924,6.39e-38,171;UBERON:0006601,6.39e-38,171;UBERON:0003056,1.78e-37,61;UBERON:0010371,3.36e-34,104;UBERON:0011216,8.80e-34,223;UBERON:0002619,1.18e-32,22;UBERON:0000956,1.28e-32,25;UBERON:0000203,1.28e-32,25;UBERON:0001950,6.24e-30,20;UBERON:0010314,1.43e-22,132;UBERON:0007023,1.86e-17,114;UBERON:0000025,9.41e-16,192;UBERON:0002420,1.05e-11,9;UBERON:0007245,1.05e-11,9;UBERON:0010009,1.05e-11,9;UBERON:0010011,1.05e-11,9;UBERON:0000454,1.05e-11,9;UBERON:0000125,3.79e-11,9;UBERON:0002308,3.79e-11,9;UBERON:0003076,5.57e-11,15;UBERON:0003057,5.57e-11,15;UBERON:0004111,9.34e-11,240;UBERON:0001871,1.07e-10,6;UBERON:0000200,9.57e-10,6;UBERON:0000483,1.49e-09,306;UBERON:0000119,2.94e-09,309;UBERON:0000922,2.99e-09,592;UBERON:0009663,6.10e-09,7;UBERON:0001872,1.54e-08,5;UBERON:0000349,1.61e-08,5;UBERON:0002021,1.66e-08,5;UBERON:0004733,4.11e-08,12;UBERON:0002028,4.11e-08,12;UBERON:0007277,4.11e-08,12;UBERON:0002298,6.53e-08,6;UBERON:0000013,1.85e-07,5;UBERON:0002410,1.85e-07,5;UBERON:0005423,2.15e-07,581;UBERON:0004732,2.52e-07,13 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.982935746006035,2.09340350391728,0,0,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,2.57612388417951,0.684372125364421,2.25976751270645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.472674085820339,0.221729397462564,0.614843499851882,3.1434978119451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,5.12289565744301,7.42166702600317,5.34492137199785,4.97573064073778,2.77552935963191,9.85438869504741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47586126251736,0.171567810298526,0,0,0,0,0,0,1.44331342025273,4.40535538905292,0,0,0,0,3.1608175918371,0.858486162094873,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,6.09827098133912,42.9461517730152,9.27946575333234,12.5637199000762,7.65526501983796,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,1.57117284469109,0,0,0,0,0,3.60959690325929,1.46329140498388,3.13739907670742,0,1.47772280450026,0,0,0,0,1.08378575017541,3.51182841698397,1.27438136522519,0.831076008928724,0.223874754722178,0,0,2.05160100093111,4.59220503979588,0.976135183992909,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,1.92495971052672,1.22520107990516,0,0,0,2.23196781820351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33496573924465,0,0,0,0,0,17.8946576597934,21.1004124615769,0.667852230137435,0,5.48926061132783,0,0.828851746593443,5.03865495708552,1.1249555075237,0,0,0,0,0,0,0,0,12.6013256992378,16.0488809820003,93.8184850605613,6.77112178821606,6.1221999997337,0,0,1.77977555204936,0.945550727071745,5.17115059862197,0.583209226766509,7.11862479226498,5.31444831488303,5.78862905401958,9.15490417902499,10.6156089533976,7.38869047383869,14.2600508150082,0,0,0.0769502585037971,0,0.922255617552241,0.718061155278177,0.325942115766024,0,0,0,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0.167821586975843,0,0.635746315921515,1.26598838716816,0.489698424477443,0.565412285735763,1.29833183845255,0,0,1.22206028986725,0,0,0,3.16785325009182,0.802577647298789,2.81117334870407,0,0.19566461893209,0,0.789168805698781,1.20990716048664,82.9457184018628,0.505492637027904,0,0.72581733978073,0,0,0,0,2.84609546029793,0,2.08271686002157,0,0,0.17472666824203,1.20390222730132,0,0,0,0,7.94305140223502,1.12990370390266,0,0,21.6522922169105,0.782205530939212,0.160317640503067,0,0,0,3.89424426964113,2.23073497220554,0,1.98804056904692,0.235694034616795,2.98989253361951,2.40586546518366,0,0,7.20504346451747,2.0535806833799,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0.268733889946905,0,3.49487848582361,0.709048640765013,0.988990300573997,1.28066733322951,1.08270229666224,0,13.5189047267582,16.8892223578354,5.14410075088061,7.01451126645892,6.23160507043778,0,0,29.8887818757481,0,0.236417121897595,2.6751839948849,0.739202355635845,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0,0,6.46414781807753,5.95046707842105,0.171086837884329,2.11444506695002,0.427149650270779,1.41483874589699,0,0,0,0,0,0,0,0,0,3.14108192500469,8.86068179966986,20.8664912982357,13.771002377715,4.0138643698305,3.32787154610557,5.02980863825206,8.16256946123762,0.124980407962107,0,0,0,12.6450424567858,9.27494583109281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36103978437314,0.521988583930423,0,0,0,0.71635536432595,0.617602894321944,0.438568099157414,0.176689145945881,0,0,0.512483037175893,0,0,17.1440460828146,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,10.4873384468994,5.17559094704073,4.4034463719651,15.507768623266,2.0367903594483,15.5179691674228,2.10690799240304,7.82102885162541,0,4.96828993507896,1.60114149657094,0,0,18.305329152491,11.3357261060468,10.0569331206005,19.4860546028717,94.2748143869226,23.8592521001552,21.3147852234043,0,0,0.707818340086442,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0.818859587550484,0.739280431085226,18.0325350931114,14.8404838736631,13.8480153655793,16.1076157892523,59.0732793739677,0.548257766857182,0,0.703484977438482,0.127762427639595,6.96412386641773,2.69026977775059,9.10448406354947,9.1064876540519,0.0887023701626388,0,0,6.86494303066,19.9949231631061,0.827356886187777,3.33694205676207,0.235479278551542,13.3548251428602,0.280272163313789,3.65263488203798,0,2.38875843943525,1.715437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| ||
|short_description=p1@FLJ22184 | |||
}} | }} |
Latest revision as of 22:30, 24 September 2015
Short description: | p1@FLJ22184 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FLJ22184_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 39bp_to_ENST00000539422, NM_001190467, uc002mip.2_5end |
EntrezGene: | FLJ22184 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.55e-11 | 8 |
neural cell | 1.05e-10 | 25 |
neuron | 1.24e-08 | 6 |
neuroblast | 1.24e-08 | 6 |
electrically signaling cell | 1.24e-08 | 6 |
neurectodermal cell | 2.35e-07 | 59 |
embryonic stem cell | 8.56e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.26e-10 | 10 |
cell type cancer | 7.64e-09 | 143 |
neuroendocrine tumor | 1.42e-08 | 6 |