FFCP PHASE1:Hg19::chrX:105066764..105066790,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=203447 | |EntrezGene=203447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25391 | |HGNC=25391 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=190bp_to_ENST00000536164_5end | |association_with_transcript=190bp_to_ENST00000536164_5end | ||
|cluster_id=chrX:105066764..105066790,+ | |||
|coexpression_cluster_id=C1194 | |coexpression_cluster_id=C1194 | ||
|description=CAGE_peak_4_at_NRK_5end | |description=CAGE_peak_4_at_NRK_5end | ||
|id=chrX:105066764..105066790,+ | |id=chrX:105066764..105066790,+ | ||
|ontology_enrichment_celltype=CL:0000188!4.47e-08!9 | |ontology_enrichment_celltype=CL:0000188!4.47e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;4.03e-12;9!CL:0000594;2.57e-08;3!CL:0002504;2.13e-07;3!CL:1000279;2.13e-07;3!CL:1000280;2.13e-07;3!CL:0002564;3.09e-07;3!CL:0000187;5.95e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.47e-12,9;CL:0000187,3.45e-09,55;CL:0000680,1.74e-08,58;CL:0000056,1.74e-08,58;CL:0000355,1.74e-08,58;CL:0000594,2.29e-08,3;CL:0000393,7.42e-08,61;CL:0000211,7.42e-08,61;CL:0002504,2.78e-07,3;CL:1000279,2.78e-07,3;CL:1000280,2.78e-07,3;CL:0002564,5.04e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.90e-09!347;UBERON:0003103!1.01e-08!69;UBERON:0003886!2.83e-08!63;UBERON:0000468!3.27e-08!659;UBERON:0007100!8.59e-08!27;UBERON:0002100!1.91e-07!216;UBERON:0000914!1.91e-07!83;UBERON:0002329!1.91e-07!83;UBERON:0003077!1.91e-07!83;UBERON:0003059!1.91e-07!83;UBERON:0007282!1.91e-07!83;UBERON:0009618!1.91e-07!83;UBERON:0007285!1.91e-07!83;UBERON:0001048!1.97e-07!168;UBERON:0005256!2.26e-07!143;UBERON:0002553!3.85e-07!70;UBERON:0000991!4.60e-07!21;UBERON:0009196!4.60e-07!21;UBERON:0009117!4.60e-07!21;UBERON:0005564!4.60e-07!21;UBERON:0002385!6.03e-07!63;UBERON:0001015!6.03e-07!63;UBERON:0000383!6.03e-07!63 | |ontology_enrichment_uberon=UBERON:0000481!3.90e-09!347;UBERON:0003103!1.01e-08!69;UBERON:0003886!2.83e-08!63;UBERON:0000468!3.27e-08!659;UBERON:0007100!8.59e-08!27;UBERON:0002100!1.91e-07!216;UBERON:0000914!1.91e-07!83;UBERON:0002329!1.91e-07!83;UBERON:0003077!1.91e-07!83;UBERON:0003059!1.91e-07!83;UBERON:0007282!1.91e-07!83;UBERON:0009618!1.91e-07!83;UBERON:0007285!1.91e-07!83;UBERON:0001048!1.97e-07!168;UBERON:0005256!2.26e-07!143;UBERON:0002553!3.85e-07!70;UBERON:0000991!4.60e-07!21;UBERON:0009196!4.60e-07!21;UBERON:0009117!4.60e-07!21;UBERON:0005564!4.60e-07!21;UBERON:0002385!6.03e-07!63;UBERON:0001015!6.03e-07!63;UBERON:0000383!6.03e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.52e-11;5!UBERON:0002216;1.52e-11;5!UBERON:0011134;1.52e-11;5!UBERON:0002209;1.52e-11;5!UBERON:0002213;1.52e-11;5!UBERON:0007844;1.52e-11;5!UBERON:0011138;1.52e-11;5!UBERON:0001130;1.52e-11;5!UBERON:0001066;1.52e-11;5!UBERON:0001468;1.52e-11;5!UBERON:0001134;8.31e-11;16!UBERON:0002036;8.31e-11;16!UBERON:0002385;1.04e-09;31!UBERON:0001015;1.04e-09;31!UBERON:0000383;1.04e-09;31!UBERON:0000922;3.55e-08;49!UBERON:0007100;1.41e-07;25!UBERON:0000948;2.79e-07;22!UBERON:0002242;3.09e-07;3!UBERON:0004905;4.67e-07;8!UBERON:0000982;4.67e-07;8!UBERON:0004770;4.67e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,2.44e-11,5;UBERON:0002216,2.44e-11,5;UBERON:0011134,2.44e-11,5;UBERON:0002209,2.44e-11,5;UBERON:0002213,2.44e-11,5;UBERON:0005856,2.44e-11,5;UBERON:0005866,2.44e-11,5;UBERON:0005863,2.44e-11,5;UBERON:0007844,2.44e-11,5;UBERON:0011138,2.44e-11,5;UBERON:0001130,2.44e-11,5;UBERON:0001066,2.44e-11,5;UBERON:0001468,2.44e-11,5;UBERON:0002385,1.00e-10,64;UBERON:0001015,1.00e-10,64;UBERON:0000383,1.00e-10,64;UBERON:0003104,1.39e-10,160;UBERON:0009142,1.39e-10,160;UBERON:0001134,4.47e-10,62;UBERON:0002036,4.47e-10,62;UBERON:0003082,4.47e-10,62;UBERON:0002329,4.05e-09,71;UBERON:0003059,4.05e-09,71;UBERON:0007282,4.05e-09,71;UBERON:0004290,4.05e-09,71;UBERON:0009618,4.05e-09,71;UBERON:0003077,6.41e-09,72;UBERON:0007285,6.41e-09,72;UBERON:0007524,1.00e-08,73;UBERON:0007503,1.03e-08,78;UBERON:0007100,3.65e-08,27;UBERON:0000948,6.91e-08,24;UBERON:0005498,6.91e-08,24;UBERON:0004140,6.91e-08,24;UBERON:0009881,6.91e-08,24;UBERON:0004141,6.91e-08,24;UBERON:0003084,6.91e-08,24;UBERON:0007005,6.91e-08,24;UBERON:0004139,6.91e-08,24;UBERON:0004291,6.91e-08,24;UBERON:0003103,1.96e-07,68;UBERON:0005256,2.02e-07,122;UBERON:0000486,4.56e-07,83;UBERON:0002242,5.04e-07,3;UBERON:0003068,5.04e-07,3;UBERON:0002328,5.04e-07,3;UBERON:0004880,5.04e-07,3;UBERON:0004905,6.17e-07,8;UBERON:0000982,6.17e-07,8;UBERON:0004770,6.17e-07,8 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0,1.0007329835313,0,2.61701557230111,0,0,0,0.982935746006035,0,0.218441372130172,0.263766978228454,3.58922423584135,2.31978163009541,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70700859703636,1.66221330396589,0,0,0,0,0,0.378139268656271,0.886917589850256,0.702678285545008,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.417989933073621,0,0,0.33472061276467,0,0,0.732186172644509,0,0,0.357198913136319,0.44905874525234,0,0,0,0.366403487860815,0,0,0,0,0,0,0.286836620748814,0,2.24271040056923,0,0.49333509683432,3.42332138939743,0.808264032418128,2.45192854670188,0,0,0,0,0,0,0.352303495931295,0.161872944368132,0.140450806702248,0,0.491337269247072,0,0,0,0,0,1.17835279767846,0.500474079487857,0,0,0,0,1.02088964844019,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.686271241194102,0,0,0,0.0925884451585296,0,0,0,0.34779121492523,1.05667824812239,0,0,0.190254152234598,0,0,0,0,0,1.87467667973554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.22001485746285,0.129271715757778,0,1.690605505112,0,0,0.514414748524284,0,1.3321108950805,0.57191197463259,0,0,0.325736184293735,1.06617584622764,0,0.602878754119172,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,2.08575535922538,1.00034104211935,1.62759014219841,0,0.535286966391485,2.05013139544115,0,0.601892199455438,0,0,0.664225598535437,1.29058417979192,0.0868836144680828,0.195801157462741,0,0,0,0,0,1.66435439510497,0,0.744323423456331,0.460385919864187,0,0.384417447767103,1.53512174720011,0.160853921143607,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.693138033939733,0.784349769176855,0,0.527758144464379,0,0,1.0795795805107,0,0.270946437543853,0,0.509752546090077,0,0.223874754722178,0,0,0.512900250232778,0.328014645699706,0,1.33953315142039,0,0,0,0,0,0.96670718292122,2.46477787383431,1.99554777143968,1.92971201478343,5.04875150880886,3.33538396002726,2.72725207731523,2.93805717634233,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,3.48017367190598,1.14378116354295,0,3.85145089230528,0,0,3.41757669408298,1.09814811894422,1.41374882814824,0,0,0,1.46290121726877,0.731140468893853,0,0.136499911407986,0.565621727814851,0,0,0,0.438450885253763,0,1.9676842561399,0,0,0,1.72093622644862,0.785992328104969,0,0,0,0,0.379473173765715,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.47748896947538,2.37571744666111,2.45728561679386,0,0,0,0,0,0.796991953004279,0.828851746593443,0,0,0,2.17727711363265,0,0,0,0.591860433821602,0,0,0,0,0,0,2.0990399999087,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0.769502585037971,0,0.23056390438806,0,0,0.957003479195758,0.915975934018623,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,12.0386647094818,0,0,0,0,0.789168805698781,4.83962864194656,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,0.678923115418936,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23425921017803,2.29160424011684,0.717873024576814,0.599037001496973,1.28767814440971,0.669514372325618,3.35917362433631,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0.83088067605837,0,0,0,0,1.89133697518076,1.36381929150995,8.44802692155252,0,0,2.1440859791201,0.662091970365432,0,0,0,0,4.7892076624995,0,0,0,0,1.32506888912221,0.129282956361551,0,0,0,0,2.82967749179399,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.50313580350515,0,0,0,0,0,1.11507737014592,0.899606224327209,0.621051827505038,0,0.265841714557995,0,0.150257608997218,2.28483127301277,1.62748293281865,0.545545977607678,0.322231671127465,0.464033759878494,1.19428766609585,0,0,0,0,0,1.92997432237433,0,0,0.694567422971502,0.244736704506468,0,3.08801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46808823803612,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0.455324382702595,3.81420191699347,0,0,0,0,0,0,3.21821680687107,0,0,10.9579046461139,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,16.2374020387348,5.34282092365053,0,0,0,0,0,0,0.0771741581079447,1.96703604453562,0,1.47088993052343,0,0,0,1.2679671827502,0,0.0939839179798536,0.0644578879735772,0,0,0,0,5.84269110597214,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0.509944148709909,0.26721740526556,1.56221329209236,0.250707539292375,0.985123076837112,1.07185652062471,0,0,0,1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| ||
|short_description=p4@NRK | |short_description=p4@NRK | ||
}} | }} |
Latest revision as of 21:45, 18 September 2015
Short description: | p4@NRK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NRK_5end |
Coexpression cluster: | C1194_skeletal_large_diaphragm_throat_trachea_testicular_tongue |
Association with transcript: | 190bp_to_ENST00000536164_5end |
EntrezGene: | NRK |
HGNC: | 25391 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.47e-12 | 9 |
muscle cell | 3.45e-09 | 55 |
muscle precursor cell | 1.74e-08 | 58 |
myoblast | 1.74e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.74e-08 | 58 |
skeletal muscle satellite cell | 2.29e-08 | 3 |
electrically responsive cell | 7.42e-08 | 61 |
electrically active cell | 7.42e-08 | 61 |
enteric smooth muscle cell | 2.78e-07 | 3 |
smooth muscle cell of large intestine | 2.78e-07 | 3 |
smooth muscle cell of colon | 2.78e-07 | 3 |
nucleus pulposus cell of intervertebral disc | 5.04e-07 | 3 |