FFCP PHASE1:Hg19::chr9:131258296..131258338,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4957 | |EntrezGene=4957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8114 | |HGNC=8114 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=161bp_to_uc004bvh.2_5end | |association_with_transcript=161bp_to_uc004bvh.2_5end | ||
|cluster_id=chr9:131258296..131258338,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_10_at_ODF2_5end | |description=CAGE_peak_10_at_ODF2_5end | ||
|id=chr9:131258296..131258338,+ | |id=chr9:131258296..131258338,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.29e-22;12!CL:0000632;1.14e-10;3!CL:0000306;2.52e-08;4!CL:0002222;2.52e-08;4!CL:0002224;2.52e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.48e-22,12;CL:0000632,1.09e-10,3;CL:0000306,2.61e-08,4;CL:0002222,2.61e-08,4;CL:0002224,2.61e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.48e-11;11!UBERON:0009497;9.72e-10;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.68e-53;19!UBERON:0006925;1.68e-53;19!UBERON:0002423;8.53e-41;25!UBERON:0002365;4.58e-33;31!UBERON:0002330;4.58e-33;31!UBERON:0002368;3.77e-28;33!UBERON:0000949;1.07e-19;43!UBERON:0005172;4.43e-14;52!UBERON:0005173;4.43e-14;52!UBERON:0002530;1.08e-11;57!UBERON:0001007;7.21e-11;81!UBERON:0002417;2.48e-10;58!UBERON:0000916;2.48e-10;58!UBERON:0010077;2.52e-08;4!UBERON:0005389;2.52e-08;4!UBERON:0000484;2.52e-08;4!UBERON:0000965;2.52e-08;4!UBERON:0001803;2.52e-08;4!UBERON:0005177;8.84e-07;99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.61e-53,19;UBERON:0006925,1.61e-53,19;UBERON:0008836,1.61e-53,19;UBERON:0008835,2.66e-46,22;UBERON:0003894,2.66e-46,22;UBERON:0009854,2.60e-44,23;UBERON:0007499,8.24e-41,25;UBERON:0009497,8.24e-41,25;UBERON:0000015,8.24e-41,25;UBERON:0002423,8.24e-41,25;UBERON:0006235,8.24e-41,25;UBERON:0004161,8.24e-41,25;UBERON:0009856,2.92e-39,26;UBERON:0002365,5.21e-33,31;UBERON:0002330,5.21e-33,31;UBERON:0002368,2.73e-29,35;UBERON:0000949,7.09e-23,45;UBERON:0003929,3.99e-19,54;UBERON:0005172,3.99e-19,54;UBERON:0005173,3.99e-19,54;UBERON:0002530,1.56e-17,59;UBERON:0002417,3.02e-17,60;UBERON:0000916,3.02e-17,60;UBERON:0005911,1.07e-12,82;UBERON:0001041,5.57e-12,87;UBERON:0005177,2.38e-10,101;UBERON:0000490,1.43e-09,148;UBERON:0009569,2.37e-09,112;UBERON:0003914,5.86e-09,117;UBERON:0001048,7.33e-09,160;UBERON:0004921,8.24e-09,118;UBERON:0005256,1.35e-08,122;UBERON:0010077,2.61e-08,4;UBERON:0005389,2.61e-08,4;UBERON:0000484,2.61e-08,4;UBERON:0002546,2.61e-08,4;UBERON:0000965,2.61e-08,4;UBERON:0001803,2.61e-08,4;UBERON:0003073,2.61e-08,4;UBERON:0005426,2.61e-08,4;UBERON:0001007,3.33e-07,145;UBERON:0001555,3.33e-07,145;UBERON:0007026,3.33e-07,145 | |||
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| ||
|short_description=p10@ODF2 | |short_description=p10@ODF2 | ||
}} | }} |
Latest revision as of 19:56, 15 September 2015
Short description: | p10@ODF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ODF2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 161bp_to_uc004bvh.2_5end |
EntrezGene: | ODF2 |
HGNC: | 8114 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.48e-22 | 12 |
hepatic stellate cell | 1.09e-10 | 3 |
crystallin accumulating cell | 2.61e-08 | 4 |
vertebrate lens cell | 2.61e-08 | 4 |
lens epithelial cell | 2.61e-08 | 4 |