FFCP PHASE1:Hg19::chr19:42479863..42479884,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:42479863..42479884,-
|short_description=p@chr19:42479863..42479884,-
|description=CAGE_peak_at_chr19:42479863..42479884,-
|association_with_transcript=NA
...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:42479863..42479884,- | |||
|coexpression_cluster_id=C2492 | |||
|description=CAGE_peak_at_chr19:42479863..42479884,- | |||
|id=chr19:42479863..42479884,- | |||
|ontology_enrichment_celltype=CL:0002322!5.54e-08!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.26e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.43e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.29e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.21e-51!86;UBERON:0001049!3.95e-51!57;UBERON:0005068!3.95e-51!57;UBERON:0006241!3.95e-51!57;UBERON:0007135!3.95e-51!57;UBERON:0000073!8.35e-51!94;UBERON:0001016!8.35e-51!94;UBERON:0001017!3.13e-50!82;UBERON:0000955!2.84e-46!69;UBERON:0006238!2.84e-46!69;UBERON:0002616!4.55e-44!59;UBERON:0002780!1.84e-42!41;UBERON:0001890!1.84e-42!41;UBERON:0006240!1.84e-42!41;UBERON:0003075!2.59e-41!86;UBERON:0007284!2.59e-41!86;UBERON:0003080!3.29e-41!42;UBERON:0002346!1.81e-40!90;UBERON:0007023!8.40e-37!115;UBERON:0002020!1.28e-34!34;UBERON:0003528!1.28e-34!34;UBERON:0001893!1.69e-34!34;UBERON:0001869!2.02e-34!32;UBERON:0002619!1.58e-33!22;UBERON:0002791!8.71e-33!33;UBERON:0003056!1.20e-30!61;UBERON:0001950!2.42e-30!20;UBERON:0000956!7.70e-29!25;UBERON:0000203!7.70e-29!25;UBERON:0000153!3.93e-25!129;UBERON:0007811!3.93e-25!129;UBERON:0000033!1.13e-24!123;UBERON:0000924!7.03e-24!173;UBERON:0006601!7.03e-24!173;UBERON:0004121!7.40e-24!169;UBERON:0000200!1.85e-12!6;UBERON:0001871!5.19e-12!7;UBERON:0000025!1.03e-11!194;UBERON:0003076!5.98e-11!15;UBERON:0003057!5.98e-11!15;UBERON:0001872!3.12e-10!5;UBERON:0000349!7.04e-10!5;UBERON:0001894!2.76e-09!7;UBERON:0006222!2.76e-09!7;UBERON:0004733!2.79e-09!12;UBERON:0002028!2.79e-09!12;UBERON:0007277!2.79e-09!12;UBERON:0004732!1.97e-08!13;UBERON:0002298!3.25e-08!8;UBERON:0002420!1.51e-07!9;UBERON:0007245!1.51e-07!9;UBERON:0010009!1.51e-07!9;UBERON:0010011!1.51e-07!9;UBERON:0000454!1.51e-07!9;UBERON:0002308!1.91e-07!9;UBERON:0000125!1.91e-07!9;UBERON:0004111!2.27e-07!241;UBERON:0000064!4.86e-07!219;UBERON:0002771!7.04e-07!3;UBERON:0000988!8.84e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.37e-61;22!UBERON:0001950;2.03e-60;20!UBERON:0003528;5.45e-60;34!UBERON:0002020;5.45e-60;34!UBERON:0001869;1.96e-59;32!UBERON:0002791;7.58e-55;32!UBERON:0001893;4.99e-54;34!UBERON:0000956;9.96e-54;25!UBERON:0000203;9.96e-54;25!UBERON:0002780;7.71e-48;41!UBERON:0001890;7.71e-48;41!UBERON:0000073;3.14e-44;53!UBERON:0002616;3.14e-44;53!UBERON:0000955;2.49e-40;68!UBERON:0001017;5.28e-30;75!UBERON:0000200;1.63e-25;6!UBERON:0001016;1.41e-23;83!UBERON:0001871;1.26e-21;6!UBERON:0001872;1.03e-20;5!UBERON:0002420;4.11e-16;9!UBERON:0007245;4.11e-16;9!UBERON:0010009;4.11e-16;9!UBERON:0010011;4.11e-16;9!UBERON:0000454;4.11e-16;9!UBERON:0000125;8.26e-16;9!UBERON:0002308;8.26e-16;9!UBERON:0000349;1.23e-13;5!UBERON:0001870;1.72e-13;3!UBERON:0000988;4.59e-13;3!UBERON:0004733;6.93e-12;12!UBERON:0002028;6.93e-12;12!UBERON:0007023;2.02e-11;114!UBERON:0002680;2.02e-11;9!UBERON:0001895;2.02e-11;9!UBERON:0002298;3.68e-11;6!UBERON:0004732;6.36e-11;13!UBERON:0002784;3.66e-10;4!UBERON:0000369;5.56e-10;4!UBERON:0002435;5.56e-10;4!UBERON:0000204;5.56e-10;4!UBERON:0001894;9.22e-10;7!UBERON:0009663;1.26e-09;7!UBERON:0002771;1.37e-09;2!UBERON:0002702;1.59e-09;2!UBERON:0001876;1.96e-09;2!UBERON:0001905;2.69e-09;2!UBERON:0002757;2.69e-09;2!UBERON:0010134;2.69e-09;2!UBERON:0005408;2.69e-09;2!UBERON:0001899;2.69e-09;2!UBERON:0011216;4.23e-09;132!UBERON:0002148;5.77e-09;2!UBERON:0006331;5.77e-09;2!UBERON:0009662;5.77e-09;2!UBERON:0002021;6.15e-08;5!UBERON:0010314;9.89e-08;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.21e-81,53;UBERON:0002616,2.21e-81,53;UBERON:0000955,8.82e-78,68;UBERON:0006238,8.82e-78,68;UBERON:0001049,1.10e-76,56;UBERON:0005068,1.10e-76,56;UBERON:0006241,1.10e-76,56;UBERON:0007135,1.10e-76,56;UBERON:0002780,4.42e-71,41;UBERON:0001890,4.42e-71,41;UBERON:0003080,4.42e-71,41;UBERON:0006240,4.42e-71,41;UBERON:0003528,5.12e-68,34;UBERON:0002020,5.12e-68,34;UBERON:0001869,6.04e-67,32;UBERON:0001017,2.82e-64,81;UBERON:0001893,8.86e-63,34;UBERON:0002791,4.20e-61,32;UBERON:0002619,4.76e-61,22;UBERON:0001950,4.03e-60,20;UBERON:0001016,3.67e-57,89;UBERON:0003075,1.79e-53,82;UBERON:0007284,1.79e-53,82;UBERON:0000956,1.84e-53,25;UBERON:0000203,1.84e-53,25;UBERON:0002346,1.21e-50,86;UBERON:0003056,1.53e-49,61;UBERON:0007023,2.46e-42,114;UBERON:0010371,1.41e-40,104;UBERON:0010314,1.20e-34,132;UBERON:0004121,6.23e-28,171;UBERON:0000924,6.23e-28,171;UBERON:0006601,6.23e-28,171;UBERON:0000200,1.28e-25,6;UBERON:0001871,1.69e-21,6;UBERON:0011216,9.26e-21,223;UBERON:0001872,1.08e-20,5;UBERON:0000025,7.53e-20,192;UBERON:0002420,5.72e-16,9;UBERON:0007245,5.72e-16,9;UBERON:0010009,5.72e-16,9;UBERON:0010011,5.72e-16,9;UBERON:0000454,5.72e-16,9;UBERON:0000125,9.76e-16,9;UBERON:0002308,9.76e-16,9;UBERON:0004111,2.86e-14,240;UBERON:0001870,1.52e-13,3;UBERON:0000349,1.54e-13,5;UBERON:0000988,4.34e-13,3;UBERON:0004733,6.43e-12,12;UBERON:0002028,6.43e-12,12;UBERON:0007277,6.43e-12,12;UBERON:0002680,1.61e-11,9;UBERON:0001895,1.61e-11,9;UBERON:0010092,1.61e-11,9;UBERON:0002298,4.23e-11,6;UBERON:0004732,5.94e-11,13;UBERON:0000483,2.70e-10,306;UBERON:0000119,4.07e-10,309;UBERON:0002784,5.66e-10,4;UBERON:0000369,6.41e-10,4;UBERON:0002435,6.41e-10,4;UBERON:0000204,6.41e-10,4;UBERON:0010082,6.41e-10,4;UBERON:0001894,1.05e-09,7;UBERON:0006222,1.05e-09,7;UBERON:0002702,1.23e-09,2;UBERON:0002771,1.46e-09,2;UBERON:0009663,1.55e-09,7;UBERON:0003076,2.08e-09,15;UBERON:0003057,2.08e-09,15;UBERON:0001876,2.23e-09,2;UBERON:0001905,4.35e-09,2;UBERON:0002757,4.35e-09,2;UBERON:0010134,4.35e-09,2;UBERON:0005408,4.35e-09,2;UBERON:0001899,4.35e-09,2;UBERON:0002148,5.12e-09,2;UBERON:0006331,5.12e-09,2;UBERON:0009662,5.12e-09,2;UBERON:0002021,1.07e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.132529768321485,0.232387885739037,0.10366105501537,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0,0.128343036279748,0,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0.144269212976445,0,0.318852545457645,0,0,0,0,0,0,0.156679895773023,0,0,0,0.80719882876419,0,0.687010689511529,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,3.97659059106519,1.1253553312841,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,4.84666373047609,2.69027484669369,1.99613798001194,0,0,0,0.1137934482855,0,0,0.344743373241465,1.45802306691627,0.694499979733169,0,1.20596438625408,0,1.87984741883082,3.54657142744257,0.658156191461918,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,1.63985112007737,0.182454789215666,0,0,0,0,2.14250933141343,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84167259326905,0,0,2.27918865441163,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0.558564802544508,0.229160424011684,0,1.39775300349294,5.57993862577542,0.223171457441873,0.403100834920358,0,0,0,0.0824158583811665,0,0,0,2.38568906942791,0.544813624446302,0.160753148465019,0.275078873194468,0,0,0,1.88323625639876,0,0,0,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,0,0,1.29282956361551,1.45455861916959,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,4.43034089983493,11.4704689007845,1.502291168478,0.573409195690071,0.998361463831671,1.1177352529449,1.10678907948985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.431299245586727,0,0.982886743728125,0,0,0,0,0,0.47317047000752,0.80057074828547,0,0,1.22035527683273,0,0.638535436228605,1.02558182120378,1.00828678488687,2.62797559364028,1.93770774758221,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0,0,2.76904096935418,1.56215619722769,2.48024155801421,1.33173201407204,1.09394961803644,0,0,0.175871244359621,0,1.07140367175657,2.35398605553177,0,0.227662191351298,0,0.115233987555779,0,3.46645638181842,4.20945750802234,0,0,0,4.87058328739606,0,0,0,0,1.50100742770978,0.47404083519818,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795803100645473,0,0,1.97892930141772,0,0,0,0.470317296361523,0,0.235676547101626,0.588925401344836,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,3.67154047030939,0.872701380680755,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0.378893491091197,0,3.31667775783512,0.413731983447581,0.426467963801962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.132529768321485,0.232387885739037,0.10366105501537,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0,0.128343036279748,0,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0.144269212976445,0,0.318852545457645,0,0,0,0,0,0,0.156679895773023,0,0,0,0.80719882876419,0,0.687010689511529,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,3.97659059106519,1.1253553312841,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,4.84666373047609,2.69027484669369,1.99613798001194,0,0,0,0.1137934482855,0,0,0.344743373241465,1.45802306691627,0.694499979733169,0,1.20596438625408,0,1.87984741883082,3.54657142744257,0.658156191461918,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,1.63985112007737,0.182454789215666,0,0,0,0,2.14250933141343,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84167259326905,0,0,2.27918865441163,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0.558564802544508,0.229160424011684,0,1.39775300349294,5.57993862577542,0.223171457441873,0.403100834920358,0,0,0,0.0824158583811665,0,0,0,2.38568906942791,0.544813624446302,0.160753148465019,0.275078873194468,0,0,0,1.88323625639876,0,0,0,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,0,0,1.29282956361551,1.45455861916959,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,4.43034089983493,11.4704689007845,1.502291168478,0.573409195690071,0.998361463831671,1.1177352529449,1.10678907948985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.431299245586727,0,0.982886743728125,0,0,0,0,0,0.47317047000752,0.80057074828547,0,0,1.22035527683273,0,0.638535436228605,1.02558182120378,1.00828678488687,2.62797559364028,1.93770774758221,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0,0,2.76904096935418,1.56215619722769,2.48024155801421,1.33173201407204,1.09394961803644,0,0,0.175871244359621,0,1.07140367175657,2.35398605553177,0,0.227662191351298,0,0.115233987555779,0,3.46645638181842,4.20945750802234,0,0,0,4.87058328739606,0,0,0,0,1.50100742770978,0.47404083519818,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795803100645473,0,0,1.97892930141772,0,0,0,0.470317296361523,0,0.235676547101626,0.588925401344836,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,3.67154047030939,0.872701380680755,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0.378893491091197,0,3.31667775783512,0.413731983447581,0.426467963801962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:42479863..42479884,- | |||
}} | }} |
Latest revision as of 08:45, 26 July 2015
Short description: | p@chr19:42479863..42479884, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:42479863..42479884, - |
Coexpression cluster: | C2492_medial_brain_temporal_postcentral_cerebellum_pons_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.29e-09 | 2 |