FFCP PHASE1:Hg19::chr5:75379067..75379080,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22987 | |EntrezGene=22987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30670 | |HGNC=30670 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=70bp_to_ENST00000502798_5end | |association_with_transcript=70bp_to_ENST00000502798_5end | ||
|cluster_id=chr5:75379067..75379080,+ | |||
|coexpression_cluster_id=C35 | |coexpression_cluster_id=C35 | ||
|description=CAGE_peak_5_at_SV2C_5end | |description=CAGE_peak_5_at_SV2C_5end | ||
|id=chr5:75379067..75379080,+ | |id=chr5:75379067..75379080,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;4.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,4.17e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.81e-35;3!UBERON:0003057;3.81e-35;3!UBERON:0010122;3.88e-25;2!UBERON:0006222;3.13e-13;1!UBERON:0005425;6.42e-13;1!UBERON:0006601;2.27e-11;82 | |||
|ontology_enrichment_disease=DOID:3095!1.68e-07!22;DOID:2994!1.68e-07!22;DOID:169!3.08e-07!6 | |ontology_enrichment_disease=DOID:3095!1.68e-07!22;DOID:2994!1.68e-07!22;DOID:169!3.08e-07!6 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000369;4.00e-48;4!UBERON:0002435;4.00e-48;4!UBERON:0000204;4.00e-48;4!UBERON:0000125;1.83e-47;9!UBERON:0002308;1.83e-47;9!UBERON:0009663;1.03e-42;7!UBERON:0005383;1.01e-36;3!UBERON:0005382;1.01e-36;3!UBERON:0002240;3.81e-35;3!UBERON:0005174;3.81e-35;3!UBERON:0001137;3.81e-35;3!UBERON:0002420;2.98e-33;9!UBERON:0007245;2.98e-33;9!UBERON:0010009;2.98e-33;9!UBERON:0010011;2.98e-33;9!UBERON:0000454;2.98e-33;9!UBERON:0001873;3.88e-25;2!UBERON:0001869;4.69e-21;32!UBERON:0003528;3.68e-20;34!UBERON:0002020;3.68e-20;34!UBERON:0002780;3.92e-20;41!UBERON:0001890;3.92e-20;41!UBERON:0001893;5.97e-19;34!UBERON:0001017;6.27e-19;75!UBERON:0002791;7.54e-17;32!UBERON:0000073;1.44e-15;53!UBERON:0002616;1.44e-15;53!UBERON:0001016;4.37e-15;83!UBERON:0000955;2.56e-14;68!UBERON:0001874;2.05e-13;1!UBERON:0001882;3.13e-13;1!UBERON:0005403;3.13e-13;1!UBERON:0000941;6.42e-13;1!UBERON:0001785;6.42e-13;1!UBERON:0002464;6.42e-13;1!UBERON:0004904;6.42e-13;1!UBERON:0001021;6.42e-13;1!UBERON:0007190;6.42e-13;1!UBERON:0001872;3.26e-10;5!UBERON:0002298;8.74e-09;6!UBERON:0004732;1.11e-08;13!UBERON:0007023;3.72e-08;114!UBERON:0001894;1.25e-07;7!UBERON:0010314;1.76e-07;132!UBERON:0001875;2.43e-07;2!UBERON:0006514;2.43e-07;2!UBERON:0002148;2.74e-07;2!UBERON:0006331;2.74e-07;2!UBERON:0009662;2.74e-07;2!UBERON:0001897;4.29e-07;2!UBERON:0003714;4.29e-07;2!UBERON:0005162;4.29e-07;2!UBERON:0000122;4.29e-07;2!UBERON:0010225;4.29e-07;2 | |||
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|short_description=p5@SV2C | |short_description=p5@SV2C | ||
}} | }} |
Latest revision as of 17:45, 18 September 2015
Short description: | p5@SV2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SV2C_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 70bp_to_ENST00000502798_5end |
EntrezGene: | SV2C |
HGNC: | 30670 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 4.17e-07 | 2 |