FFCP PHASE1:Hg19::chr5:152870169..152870188,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2890 | |EntrezGene=2890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4571 | |HGNC=4571 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000544403_5end | |association_with_transcript=0bp_to_ENST00000544403_5end | ||
|cluster_id=chr5:152870169..152870188,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_2_at_GRIA1_5end | |description=CAGE_peak_2_at_GRIA1_5end | ||
|id=chr5:152870169..152870188,+ | |id=chr5:152870169..152870188,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.86e-07!25 | |ontology_enrichment_celltype=CL:0002319!1.86e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002605;4.06e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.72e-08,3;CL:0000047,1.04e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.41e-14;82!UBERON:0006215;8.07e-09;3!UBERON:0006241;9.61e-08;3!UBERON:0003057;9.61e-08;3!UBERON:0010122;7.03e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.86e-60!82;UBERON:0001049!3.86e-59!57;UBERON:0005068!3.86e-59!57;UBERON:0006241!3.86e-59!57;UBERON:0007135!3.86e-59!57;UBERON:0000073!3.18e-58!94;UBERON:0001016!3.18e-58!94;UBERON:0005743!6.40e-58!86;UBERON:0000955!7.95e-52!69;UBERON:0006238!7.95e-52!69;UBERON:0002616!2.09e-51!59;UBERON:0003075!1.16e-47!86;UBERON:0007284!1.16e-47!86;UBERON:0002780!1.26e-46!41;UBERON:0001890!1.26e-46!41;UBERON:0006240!1.26e-46!41;UBERON:0003080!3.70e-45!42;UBERON:0002346!1.66e-44!90;UBERON:0001869!1.95e-42!32;UBERON:0001893!6.86e-42!34;UBERON:0002020!9.60e-42!34;UBERON:0003528!9.60e-42!34;UBERON:0002791!1.26e-40!33;UBERON:0003056!7.41e-36!61;UBERON:0000956!1.33e-33!25;UBERON:0000203!1.33e-33!25;UBERON:0004121!1.68e-32!169;UBERON:0007023!3.25e-31!115;UBERON:0000924!4.13e-31!173;UBERON:0006601!4.13e-31!173;UBERON:0002619!2.87e-30!22;UBERON:0000033!1.35e-29!123;UBERON:0000153!3.29e-29!129;UBERON:0007811!3.29e-29!129;UBERON:0001950!1.53e-27!20;UBERON:0000475!3.58e-15!365;UBERON:0003076!1.46e-14!15;UBERON:0003057!1.46e-14!15;UBERON:0004733!1.58e-11!12;UBERON:0002028!1.58e-11!12;UBERON:0007277!1.58e-11!12;UBERON:0001871!1.62e-11!7;UBERON:0000025!3.70e-11!194;UBERON:0004732!2.17e-10!13;UBERON:0002420!4.26e-10!9;UBERON:0007245!4.26e-10!9;UBERON:0010009!4.26e-10!9;UBERON:0010011!4.26e-10!9;UBERON:0000454!4.26e-10!9;UBERON:0002308!1.28e-09!9;UBERON:0000125!1.28e-09!9;UBERON:0000119!2.78e-09!312;UBERON:0000483!3.11e-09!309;UBERON:0000200!4.12e-09!6;UBERON:0002680!1.68e-08!9;UBERON:0001895!1.68e-08!9;UBERON:0010092!1.68e-08!9;UBERON:0000349!2.98e-08!5;UBERON:0000468!3.54e-08!659;UBERON:0000064!5.02e-08!219;UBERON:0001872!7.42e-08!5;UBERON:0000481!8.43e-08!347;UBERON:0002021!1.60e-07!5;UBERON:0009663!1.68e-07!7;UBERON:0000467!4.29e-07!625;UBERON:0000480!5.04e-07!626;UBERON:0000369!8.06e-07!4;UBERON:0002435!8.06e-07!4;UBERON:0000204!8.06e-07!4;UBERON:0010082!8.06e-07!4;UBERON:0000062!9.80e-07!511 | |ontology_enrichment_uberon=UBERON:0001017!7.86e-60!82;UBERON:0001049!3.86e-59!57;UBERON:0005068!3.86e-59!57;UBERON:0006241!3.86e-59!57;UBERON:0007135!3.86e-59!57;UBERON:0000073!3.18e-58!94;UBERON:0001016!3.18e-58!94;UBERON:0005743!6.40e-58!86;UBERON:0000955!7.95e-52!69;UBERON:0006238!7.95e-52!69;UBERON:0002616!2.09e-51!59;UBERON:0003075!1.16e-47!86;UBERON:0007284!1.16e-47!86;UBERON:0002780!1.26e-46!41;UBERON:0001890!1.26e-46!41;UBERON:0006240!1.26e-46!41;UBERON:0003080!3.70e-45!42;UBERON:0002346!1.66e-44!90;UBERON:0001869!1.95e-42!32;UBERON:0001893!6.86e-42!34;UBERON:0002020!9.60e-42!34;UBERON:0003528!9.60e-42!34;UBERON:0002791!1.26e-40!33;UBERON:0003056!7.41e-36!61;UBERON:0000956!1.33e-33!25;UBERON:0000203!1.33e-33!25;UBERON:0004121!1.68e-32!169;UBERON:0007023!3.25e-31!115;UBERON:0000924!4.13e-31!173;UBERON:0006601!4.13e-31!173;UBERON:0002619!2.87e-30!22;UBERON:0000033!1.35e-29!123;UBERON:0000153!3.29e-29!129;UBERON:0007811!3.29e-29!129;UBERON:0001950!1.53e-27!20;UBERON:0000475!3.58e-15!365;UBERON:0003076!1.46e-14!15;UBERON:0003057!1.46e-14!15;UBERON:0004733!1.58e-11!12;UBERON:0002028!1.58e-11!12;UBERON:0007277!1.58e-11!12;UBERON:0001871!1.62e-11!7;UBERON:0000025!3.70e-11!194;UBERON:0004732!2.17e-10!13;UBERON:0002420!4.26e-10!9;UBERON:0007245!4.26e-10!9;UBERON:0010009!4.26e-10!9;UBERON:0010011!4.26e-10!9;UBERON:0000454!4.26e-10!9;UBERON:0002308!1.28e-09!9;UBERON:0000125!1.28e-09!9;UBERON:0000119!2.78e-09!312;UBERON:0000483!3.11e-09!309;UBERON:0000200!4.12e-09!6;UBERON:0002680!1.68e-08!9;UBERON:0001895!1.68e-08!9;UBERON:0010092!1.68e-08!9;UBERON:0000349!2.98e-08!5;UBERON:0000468!3.54e-08!659;UBERON:0000064!5.02e-08!219;UBERON:0001872!7.42e-08!5;UBERON:0000481!8.43e-08!347;UBERON:0002021!1.60e-07!5;UBERON:0009663!1.68e-07!7;UBERON:0000467!4.29e-07!625;UBERON:0000480!5.04e-07!626;UBERON:0000369!8.06e-07!4;UBERON:0002435!8.06e-07!4;UBERON:0000204!8.06e-07!4;UBERON:0010082!8.06e-07!4;UBERON:0000062!9.80e-07!511 | ||
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| ||
|short_description=p2@GRIA1 | |short_description=p2@GRIA1 | ||
}} | }} |
Latest revision as of 11:23, 16 September 2015
Short description: | p2@GRIA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GRIA1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000544403_5end |
EntrezGene: | GRIA1 |
HGNC: | 4571 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.72e-08 | 3 |
neuronal stem cell | 1.04e-07 | 8 |