FFCP PHASE1:Hg19::chr3:87039662..87039723,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:87039662..87039723,- | |||
|coexpression_cluster_id=C461 | |coexpression_cluster_id=C461 | ||
|description=CAGE_peak_at_chr3:87039662..87039723,- | |description=CAGE_peak_at_chr3:87039662..87039723,- | ||
|id=chr3:87039662..87039723,- | |id=chr3:87039662..87039723,- | ||
|ontology_enrichment_celltype=CL:0000057!3.09e-19!75;CL:0000055!7.78e-16!180;CL:0000548!1.39e-14!679;CL:0000004!1.39e-14!679;CL:0000255!1.39e-14!679;CL:0000012!4.70e-14!682;CL:0002620!5.25e-14!23;CL:0000144!1.01e-08!625;CL:0000003!5.19e-08!722;CL:0000063!3.01e-07!578;CL:0000066!3.03e-07!254;CL:0002371!4.28e-07!591 | |ontology_enrichment_celltype=CL:0000057!3.09e-19!75;CL:0000055!7.78e-16!180;CL:0000548!1.39e-14!679;CL:0000004!1.39e-14!679;CL:0000255!1.39e-14!679;CL:0000012!4.70e-14!682;CL:0002620!5.25e-14!23;CL:0000144!1.01e-08!625;CL:0000003!5.19e-08!722;CL:0000063!3.01e-07!578;CL:0000066!3.03e-07!254;CL:0002371!4.28e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.08e-17;23!CL:0000349;1.85e-09;19!CL:0000057;7.06e-08;73!CL:0002334;3.29e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.30e-19,76;CL:0002620,4.60e-17,23;CL:0000349,2.12e-09,19;CL:0002334,1.25e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.13e-12!95;UBERON:0004923!9.42e-12!57;UBERON:0000478!6.04e-11!24;UBERON:0005631!6.19e-11!14;UBERON:0000158!6.19e-11!14;UBERON:0000486!7.11e-10!82;UBERON:0005256!1.85e-09!143;UBERON:0002199!3.53e-09!45;UBERON:0002416!3.53e-09!45;UBERON:0002097!4.75e-09!40;UBERON:0000914!1.03e-08!83;UBERON:0002329!1.03e-08!83;UBERON:0003077!1.03e-08!83;UBERON:0003059!1.03e-08!83;UBERON:0007282!1.03e-08!83;UBERON:0009618!1.03e-08!83;UBERON:0007285!1.03e-08!83;UBERON:0003104!7.40e-08!238;UBERON:0009142!7.40e-08!238;UBERON:0004290!1.12e-07!70;UBERON:0000064!4.26e-07!219;UBERON:0004119!5.69e-07!169;UBERON:0000925!5.69e-07!169;UBERON:0006595!5.69e-07!169;UBERON:0001737!6.88e-07!9;UBERON:0002100!8.05e-07!216 | |ontology_enrichment_uberon=UBERON:0003102!2.13e-12!95;UBERON:0004923!9.42e-12!57;UBERON:0000478!6.04e-11!24;UBERON:0005631!6.19e-11!14;UBERON:0000158!6.19e-11!14;UBERON:0000486!7.11e-10!82;UBERON:0005256!1.85e-09!143;UBERON:0002199!3.53e-09!45;UBERON:0002416!3.53e-09!45;UBERON:0002097!4.75e-09!40;UBERON:0000914!1.03e-08!83;UBERON:0002329!1.03e-08!83;UBERON:0003077!1.03e-08!83;UBERON:0003059!1.03e-08!83;UBERON:0007282!1.03e-08!83;UBERON:0009618!1.03e-08!83;UBERON:0007285!1.03e-08!83;UBERON:0003104!7.40e-08!238;UBERON:0009142!7.40e-08!238;UBERON:0004290!1.12e-07!70;UBERON:0000064!4.26e-07!219;UBERON:0004119!5.69e-07!169;UBERON:0000925!5.69e-07!169;UBERON:0006595!5.69e-07!169;UBERON:0001737!6.88e-07!9;UBERON:0002100!8.05e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;7.30e-12;24!UBERON:0005631;1.13e-11;10!UBERON:0000158;1.13e-11;10!UBERON:0001737;2.90e-09;9!UBERON:0001557;2.90e-09;9!UBERON:0002097;3.10e-08;41!UBERON:0000305;3.72e-08;7!UBERON:0002199;9.77e-08;46!UBERON:0002416;9.77e-08;46!UBERON:0003102;7.28e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.42e-15,14;UBERON:0000158,3.42e-15,14;UBERON:0000478,1.01e-11,24;UBERON:0002199,4.38e-11,46;UBERON:0002416,4.38e-11,46;UBERON:0002097,2.07e-10,41;UBERON:0004923,2.66e-10,66;UBERON:0001737,2.56e-09,9;UBERON:0004871,5.37e-09,8;UBERON:0003124,7.18e-09,7;UBERON:0003102,2.47e-08,99;UBERON:0000305,5.82e-08,7 | |||
|phase1_expression=1.63510541343501,1.71280419112787,1.83240725324762,0,0,1.74467704820074,0,1.89515962028049,0,5.89761447603621,6.97801167972428,10.9220686065086,8.17677632508206,0.247532705920093,0.994192127183747,0,0.602694528023977,0,0,0,0.408001382488506,0.940364164434263,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.66221330396589,0.361439152384566,0,0.579386075843295,0,0,0.850813354476611,1.99556457716308,2.63504357079378,0.130979075497713,0.364295288292542,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0.71153252537342,0,0,0,0,0,0,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0.872188104285069,2.98183171017191,3.03913227994991,8.20936921041957,1.14734648299525,0.354668382198357,0,1.06748995729705,0.49333509683432,0.311211035399766,0.67355336034844,0.163461903113459,0.151357427644931,0.576175924479999,3.98346434117454,1.87296046098192,2.85235910772225,0.896692083310806,3.40560046066918,3.39933183173076,2.52811452064047,1.02077085627447,0.368502951935304,0.619954687054593,0,0.494533858557114,0.910161361938026,2.15585442544872,0.841680569770331,1.37630371859161,3.04770527032601,0,2.45190236639216,0.45071417671979,1.36118619792025,3.94657198515496,2.13557388818567,4.23863802319124,6.00182192168805,2.98852334791473,2.57640540045629,2.04728541964749,6.41350062516812,2.53336213419116,8.33031455005578,3.12969655383818,0.646584227275248,4.26011511019937,2.21654616100809,2.37384829234683,1.15956511897978,0.545492241181669,0.573609190778008,0,0,0.116193942869518,0.518305275076852,0,0,1.56449532329816,1.28648187638577,0,0.464367928031979,0,2.48444280083672,2.52877035117153,3.85617647813571,2.97793726377464,3.7039505495709,5.69449485866632,2.15730093056263,2.35465758150415,3.07797725557112,0,2.80483547606892,0,1.47008711385542,0,0,0,0,2.82873408649161,0.343135620597051,1.20725313949488,1.1240175325762,0.402115889646523,0.833296006426766,1.3032332212413,1.03993478527958,1.44331342025273,0,2.34817388471643,0,0,0,0,0,0,0,0,0,0.839910640994298,0.141775097242386,3.22410681730254,4.94077695473735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,0.43596006883328,0.80672114403045,1.55126058909333,0,0.845302752556,1.59562869950922,1.04007436911366,1.28603687131071,0,0.799266537048298,0.285955987316295,0,0.823240336780769,0.977208552881205,0,0.791951872933429,0.301439377059586,0,1.89948683245908,0,0,0,0.718874566474748,0,0,2.46128221334885,1.64381058040307,1.43248770591916,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,1.03985430765404,0.535286966391485,1.41932173530541,1.40569697991256,0,0,0,3.32112799267718,2.21243002250044,1.56390506042549,0,0,0,0,0,6.06255142892519,1.66435439510497,3.62868351995616,1.98486246255021,1.99500565274481,1.12264037773229,1.92208723883551,4.09365799253363,2.89537058058494,1.48418066444991,3.23840356985577,1.06537035187876,1.97105174433142,0,1.74315567689939,1.20859449591622,1.40354529212299,1.65745780084613,0.34444334449382,0.364182336013434,0.393373244878272,2.25599806453706,5.08301224889137,0.784349769176855,0,1.37217117560738,0,0,0.863663664408557,0,0.541892875087706,0,1.78413391131527,3.3243040357149,0.447749509444357,0,0,0,0,0.976135183992909,4.01859945426117,0,0,0,0,4.82051789532479,0.580024309752732,3.08097234229289,2.45605879561807,3.58375088459779,1.6113036730241,1.59518363305651,1.96021243057032,0.534192213880424,1.4875642382488,0.768760269460425,4.97689578728878,1.71968227454435,5.57814659156743,8.49993336442728,0,0,0,0.869932992075073,0.55597265731176,0.572499546967965,0,1.2655176988749,1.5250415513906,1.02359116524534,0.855877976067841,1.90921948755562,0,0.899362287916574,0.274537029736055,1.53156123049392,0.202182481573316,0,0.842516912477962,0.975267478179181,0,1.05650146756755,0.682499557039929,0.424216295861138,1.13008116620243,0.551365343546124,1.32687795048244,0,0.578775534266688,0.655894752046633,0.811641507850816,0.30982349809975,0,0.717056761020258,2.35797698431491,0.7133421029625,0.709522128141196,0.422215270595328,0.658589785919804,0.75894634753143,2.44954304171488,0.0962221127255121,0,0,1.69458841398202,3.44404298136984,0,2.66058092122005,7.81059560703662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0.557216921387392,0,24.8294264127198,4.15750553165694,31.6375523162209,0,0,0.333926115068718,1.6480387422676,0,0.597743964753209,0,0,0,0,1.55519793830904,2.78591888556713,0.358042349351218,0,0.295930216910801,0,2.22273980289274,0,0,0,0,0,0,0,0.508507300585533,17.2563007690594,0,0,0,0,0,0,0,0,0.438770794307945,0,0.41827123283581,0,1.93701494939902,1.38338342632836,0.179515288819544,0.217294743844016,30.6241113342643,7.14461228534526,50.1052689457517,0,0,0,0,0,0,0,0,0,2.44849212238722,0.565412285735763,0,0.995261931078505,0.088457564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| ||
|short_description=p@chr3:87039662..87039723,- | |short_description=p@chr3:87039662..87039723,- | ||
}} | }} |
Latest revision as of 23:48, 29 July 2015
Short description: | p@chr3:87039662..87039723, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:87039662..87039723, - |
Coexpression cluster: | C461_oral_chorionic_squamous_amniotic_epidermoid_gall_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.30e-19 | 76 |
skin fibroblast | 4.60e-17 | 23 |
extraembryonic cell | 2.12e-09 | 19 |
preadipocyte | 1.25e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.42e-15 | 14 |
membranous layer | 3.42e-15 | 14 |
extraembryonic structure | 1.01e-11 | 24 |
integument | 4.38e-11 | 46 |
integumental system | 4.38e-11 | 46 |
skin of body | 2.07e-10 | 41 |
organ component layer | 2.66e-10 | 66 |
larynx | 2.56e-09 | 9 |
somatic layer of lateral plate mesoderm | 5.37e-09 | 8 |
chorion | 7.18e-09 | 7 |
surface structure | 2.47e-08 | 99 |
amnion | 5.82e-08 | 7 |