FFCP PHASE1:Hg19::chr2:241836298..241836311,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79919 | |EntrezGene=79919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26216 | |HGNC=26216 | ||
|TSSclassifier=strong | |||
|UniProt=C9JEK0 | |UniProt=C9JEK0 | ||
|association_with_transcript=0bp_to_ENST00000414499_5end | |association_with_transcript=0bp_to_ENST00000414499_5end | ||
|cluster_id=chr2:241836298..241836311,- | |||
|coexpression_cluster_id=C76 | |coexpression_cluster_id=C76 | ||
|description=CAGE_peak_4_at_C2orf54_5end | |description=CAGE_peak_4_at_C2orf54_5end | ||
|id=chr2:241836298..241836311,- | |id=chr2:241836298..241836311,- | ||
|ontology_enrichment_celltype=CL:0000223!5.95e-17!59;CL:0000066!5.62e-09!254;CL:0002076!7.16e-09!43;CL:0000181!1.35e-08!12;CL:0000417!1.35e-08!12;CL:0000668!1.35e-08!12;CL:0000414!1.35e-08!12;CL:0000412!1.35e-08!12;CL:0000182!1.35e-08!12;CL:0000082!5.60e-07!19 | |ontology_enrichment_celltype=CL:0000223!5.95e-17!59;CL:0000066!5.62e-09!254;CL:0002076!7.16e-09!43;CL:0000181!1.35e-08!12;CL:0000417!1.35e-08!12;CL:0000668!1.35e-08!12;CL:0000414!1.35e-08!12;CL:0000412!1.35e-08!12;CL:0000182!1.35e-08!12;CL:0000082!5.60e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002553;3.73e-14;1!CL:0002563;1.83e-13;4!CL:0002535;9.25e-08;2!CL:0002253;1.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.50e-14,1;CL:0002563,1.52e-13,4;CL:0002535,9.25e-08,2;CL:0002253,1.54e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.85e-14;1!UBERON:0008814;1.87e-07;2!UBERON:0010056;1.87e-07;2!UBERON:0006595;4.96e-07;86!UBERON:0001041;6.68e-07;30 | |||
|ontology_enrichment_disease=DOID:305!2.89e-19!106;DOID:0050687!3.07e-12!143;DOID:1749!5.27e-12!14;DOID:7!2.07e-08!39 | |ontology_enrichment_disease=DOID:305!2.89e-19!106;DOID:0050687!3.07e-12!143;DOID:1749!5.27e-12!14;DOID:7!2.07e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:178;1.25e-13;1!DOID:326;1.25e-13;1!DOID:3978;1.25e-13;1!DOID:3394;1.25e-13;1!DOID:5844;1.25e-13;1!DOID:3119;1.36e-08;14!DOID:114;1.87e-07;2!DOID:3910;1.87e-07;2!DOID:4929;1.87e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,9.73e-14,1;DOID:326,9.73e-14,1;DOID:3978,9.73e-14,1;DOID:3394,9.73e-14,1;DOID:5844,9.73e-14,1;DOID:3119,1.38e-08,14;DOID:114,1.64e-07,2;DOID:4929,2.25e-07,2;DOID:3910,2.40e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.75e-27!129;UBERON:0004185!1.75e-27!129;UBERON:0001007!3.03e-25!155;UBERON:0001555!3.03e-25!155;UBERON:0007026!3.03e-25!155;UBERON:0004119!1.44e-23!169;UBERON:0000925!1.44e-23!169;UBERON:0006595!1.44e-23!169;UBERON:0000077!8.49e-21!130;UBERON:0001041!5.78e-20!98;UBERON:0005911!3.23e-15!82;UBERON:0000065!2.92e-12!53;UBERON:0005178!3.53e-12!34;UBERON:0002224!3.53e-12!34;UBERON:0005181!9.58e-12!35;UBERON:0000344!1.54e-11!12;UBERON:0001004!1.58e-11!72;UBERON:0000466!1.63e-11!126;UBERON:0000072!3.40e-11!46;UBERON:0005177!3.67e-11!107;UBERON:0007499!1.70e-10!25;UBERON:0009497!2.61e-10!25;UBERON:0000015!2.61e-10!25;UBERON:0002423!2.61e-10!25;UBERON:0006235!2.61e-10!25;UBERON:0004161!2.61e-10!25;UBERON:0009856!5.18e-10!26;UBERON:0001723!8.27e-10!3;UBERON:0001033!8.27e-10!3;UBERON:0010056!8.27e-10!3;UBERON:0008835!8.54e-10!22;UBERON:0003894!8.54e-10!22;UBERON:0002048!1.20e-09!22;UBERON:0000117!1.20e-09!22;UBERON:0000171!1.20e-09!22;UBERON:0000170!1.20e-09!22;UBERON:0005597!1.20e-09!22;UBERON:0000118!1.20e-09!22;UBERON:0006562!2.32e-09!11;UBERON:0009569!2.43e-09!113;UBERON:0009854!2.71e-09!23;UBERON:0005153!2.83e-09!37;UBERON:0000160!3.21e-09!27;UBERON:0003929!3.28e-09!54;UBERON:0008947!8.14e-09!38;UBERON:0003258!8.14e-09!38;UBERON:0000915!2.98e-08!52;UBERON:0005409!4.04e-08!35;UBERON:0003104!4.22e-08!238;UBERON:0009142!4.22e-08!238;UBERON:0000481!6.78e-08!347;UBERON:0001048!1.17e-07!168;UBERON:0001042!1.91e-07!10;UBERON:0009145!1.91e-07!10;UBERON:0005157!3.50e-07!51;UBERON:0007196!4.06e-07!14;UBERON:0001558!4.06e-07!14;UBERON:0003127!4.59e-07!2;UBERON:0002107!4.83e-07!19;UBERON:0006925!4.83e-07!19;UBERON:0008836!4.83e-07!19;UBERON:0004802!5.60e-07!19;UBERON:0000115!5.60e-07!19;UBERON:0000974!6.10e-07!10;UBERON:0003343!7.92e-07!4;UBERON:0004785!7.92e-07!4;UBERON:0002108!8.44e-07!14 | |ontology_enrichment_uberon=UBERON:0004921!1.75e-27!129;UBERON:0004185!1.75e-27!129;UBERON:0001007!3.03e-25!155;UBERON:0001555!3.03e-25!155;UBERON:0007026!3.03e-25!155;UBERON:0004119!1.44e-23!169;UBERON:0000925!1.44e-23!169;UBERON:0006595!1.44e-23!169;UBERON:0000077!8.49e-21!130;UBERON:0001041!5.78e-20!98;UBERON:0005911!3.23e-15!82;UBERON:0000065!2.92e-12!53;UBERON:0005178!3.53e-12!34;UBERON:0002224!3.53e-12!34;UBERON:0005181!9.58e-12!35;UBERON:0000344!1.54e-11!12;UBERON:0001004!1.58e-11!72;UBERON:0000466!1.63e-11!126;UBERON:0000072!3.40e-11!46;UBERON:0005177!3.67e-11!107;UBERON:0007499!1.70e-10!25;UBERON:0009497!2.61e-10!25;UBERON:0000015!2.61e-10!25;UBERON:0002423!2.61e-10!25;UBERON:0006235!2.61e-10!25;UBERON:0004161!2.61e-10!25;UBERON:0009856!5.18e-10!26;UBERON:0001723!8.27e-10!3;UBERON:0001033!8.27e-10!3;UBERON:0010056!8.27e-10!3;UBERON:0008835!8.54e-10!22;UBERON:0003894!8.54e-10!22;UBERON:0002048!1.20e-09!22;UBERON:0000117!1.20e-09!22;UBERON:0000171!1.20e-09!22;UBERON:0000170!1.20e-09!22;UBERON:0005597!1.20e-09!22;UBERON:0000118!1.20e-09!22;UBERON:0006562!2.32e-09!11;UBERON:0009569!2.43e-09!113;UBERON:0009854!2.71e-09!23;UBERON:0005153!2.83e-09!37;UBERON:0000160!3.21e-09!27;UBERON:0003929!3.28e-09!54;UBERON:0008947!8.14e-09!38;UBERON:0003258!8.14e-09!38;UBERON:0000915!2.98e-08!52;UBERON:0005409!4.04e-08!35;UBERON:0003104!4.22e-08!238;UBERON:0009142!4.22e-08!238;UBERON:0000481!6.78e-08!347;UBERON:0001048!1.17e-07!168;UBERON:0001042!1.91e-07!10;UBERON:0009145!1.91e-07!10;UBERON:0005157!3.50e-07!51;UBERON:0007196!4.06e-07!14;UBERON:0001558!4.06e-07!14;UBERON:0003127!4.59e-07!2;UBERON:0002107!4.83e-07!19;UBERON:0006925!4.83e-07!19;UBERON:0008836!4.83e-07!19;UBERON:0004802!5.60e-07!19;UBERON:0000115!5.60e-07!19;UBERON:0000974!6.10e-07!10;UBERON:0003343!7.92e-07!4;UBERON:0004785!7.92e-07!4;UBERON:0002108!8.44e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.25e-13;1!UBERON:0004913;1.25e-13;1!UBERON:0003703;1.25e-13;1!UBERON:0001961;1.25e-13;1!UBERON:0001744;1.25e-13;1!UBERON:0001042;1.25e-13;1!UBERON:0001735;1.25e-13;1!UBERON:0001174;1.25e-13;1!UBERON:0004914;1.25e-13;1!UBERON:0001242;1.83e-13;4!UBERON:0001262;1.83e-13;4!UBERON:0004786;1.83e-13;4!UBERON:0004808;1.83e-13;4!UBERON:0001277;1.83e-13;4!UBERON:0004921;1.65e-12;33!UBERON:0000160;2.80e-11;17!UBERON:0005409;7.05e-09;22!UBERON:0000485;4.42e-08;7!UBERON:0003929;4.42e-08;7!UBERON:0006955;9.25e-08;2!UBERON:0004801;9.25e-08;2!UBERON:0006562;1.87e-07;2!UBERON:0004903;1.87e-07;2!UBERON:0002173;1.87e-07;2!UBERON:0002186;1.87e-07;2!UBERON:0003350;3.56e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,7.55e-14,1;UBERON:0001961,7.55e-14,1;UBERON:0001744,7.55e-14,1;UBERON:0001735,7.55e-14,1;UBERON:0001242,1.52e-13,4;UBERON:0001262,1.52e-13,4;UBERON:0004786,1.52e-13,4;UBERON:0004808,1.52e-13,4;UBERON:0001277,1.52e-13,4;UBERON:0004921,1.58e-13,118;UBERON:0004913,1.83e-13,1;UBERON:0003703,1.83e-13,1;UBERON:0001174,1.83e-13,1;UBERON:0004914,1.83e-13,1;UBERON:0000160,2.80e-11,17;UBERON:0001007,9.66e-11,145;UBERON:0001555,9.66e-11,145;UBERON:0007026,9.66e-11,145;UBERON:0004119,1.36e-09,160;UBERON:0000925,1.36e-09,160;UBERON:0006595,1.36e-09,160;UBERON:0005911,6.90e-09,82;UBERON:0001041,2.64e-08,87;UBERON:0007499,4.22e-08,25;UBERON:0003929,5.82e-08,54;UBERON:0005409,7.08e-08,25;UBERON:0009856,8.50e-08,26;UBERON:0006955,9.25e-08,2;UBERON:0004801,9.25e-08,2;UBERON:0011216,1.38e-07,223;UBERON:0004903,2.40e-07,2;UBERON:0002173,2.40e-07,2;UBERON:0002186,2.40e-07,2;UBERON:0003350,3.24e-07,8 | |||
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| ||
|short_description=p4@C2orf54 | |short_description=p4@C2orf54 | ||
}} | }} |
Latest revision as of 09:07, 16 September 2015
Short description: | p4@C2orf54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C2orf54_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 0bp_to_ENST00000414499_5end |
EntrezGene: | C2orf54 |
HGNC: | 26216 |
UniProt: | C9JEK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.50e-14 | 1 |
intestinal epithelial cell | 1.52e-13 | 4 |
epithelial cell of cervix | 9.25e-08 | 2 |
epithelial cell of large intestine | 1.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
tonsil | 7.55e-14 | 1 |
mucosa-associated lymphoid tissue | 7.55e-14 | 1 |
lymphoid tissue | 7.55e-14 | 1 |
tonsillar ring | 7.55e-14 | 1 |
intestinal mucosa | 1.52e-13 | 4 |
wall of intestine | 1.52e-13 | 4 |
gastrointestinal system mucosa | 1.52e-13 | 4 |
gastrointestinal system epithelium | 1.52e-13 | 4 |
intestinal epithelium | 1.52e-13 | 4 |
subdivision of digestive tract | 1.58e-13 | 118 |
hepatopancreatic ampulla | 1.83e-13 | 1 |
extrahepatic bile duct | 1.83e-13 | 1 |
common bile duct | 1.83e-13 | 1 |
duodenal papilla | 1.83e-13 | 1 |
intestine | 2.80e-11 | 17 |
digestive system | 9.66e-11 | 145 |
digestive tract | 9.66e-11 | 145 |
primitive gut | 9.66e-11 | 145 |
endoderm-derived structure | 1.36e-09 | 160 |
endoderm | 1.36e-09 | 160 |
presumptive endoderm | 1.36e-09 | 160 |
endo-epithelium | 6.90e-09 | 82 |
foregut | 2.64e-08 | 87 |
epithelial sac | 4.22e-08 | 25 |
gut epithelium | 5.82e-08 | 54 |
gastrointestinal system | 7.08e-08 | 25 |
sac | 8.50e-08 | 26 |
uterine epithelium | 9.25e-08 | 2 |
cervix epithelium | 9.25e-08 | 2 |
organ system subdivision | 1.38e-07 | 223 |
bronchoalveolar duct junction | 2.40e-07 | 2 |
alveolar duct | 2.40e-07 | 2 |
bronchiole | 2.40e-07 | 2 |
epithelium of mucosa | 3.24e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 9.73e-14 | 1 |
ischemia | 9.73e-14 | 1 |
extrinsic cardiomyopathy | 9.73e-14 | 1 |
myocardial ischemia | 9.73e-14 | 1 |
myocardial infarction | 9.73e-14 | 1 |
gastrointestinal system cancer | 1.38e-08 | 14 |
heart disease | 1.64e-07 | 2 |
tubular adenocarcinoma | 2.25e-07 | 2 |
lung adenocarcinoma | 2.40e-07 | 2 |