FFCP PHASE1:Hg19::chr2:216274354..216274463,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=209bp_to_ENST00000471193_5end | |association_with_transcript=209bp_to_ENST00000471193_5end | ||
|cluster_id=chr2:216274354..216274463,- | |||
|coexpression_cluster_id=C79 | |coexpression_cluster_id=C79 | ||
|description=CAGE_peak_8_at_FN1_5end | |description=CAGE_peak_8_at_FN1_5end | ||
|id=chr2:216274354..216274463,- | |id=chr2:216274354..216274463,- | ||
|ontology_enrichment_celltype=CL:0000055!8.50e-37!180;CL:0000057!1.08e-24!75;CL:0000680!8.44e-15!57;CL:0000056!8.44e-15!57;CL:0000355!8.44e-15!57;CL:0000183!2.66e-14!59;CL:0000220!3.16e-14!246;CL:0002321!8.74e-14!248;CL:0002371!1.28e-13!591;CL:0000187!1.52e-13!54;CL:0000222!1.05e-12!119;CL:0000393!8.37e-12!60;CL:0000211!8.37e-12!60;CL:0000144!2.93e-11!625;CL:0002620!7.42e-10!23;CL:0000192!4.55e-09!42;CL:0000514!4.55e-09!42;CL:0002494!6.39e-08!16;CL:0002334!9.54e-08!12;CL:0000359!1.18e-07!32 | |ontology_enrichment_celltype=CL:0000055!8.50e-37!180;CL:0000057!1.08e-24!75;CL:0000680!8.44e-15!57;CL:0000056!8.44e-15!57;CL:0000355!8.44e-15!57;CL:0000183!2.66e-14!59;CL:0000220!3.16e-14!246;CL:0002321!8.74e-14!248;CL:0002371!1.28e-13!591;CL:0000187!1.52e-13!54;CL:0000222!1.05e-12!119;CL:0000393!8.37e-12!60;CL:0000211!8.37e-12!60;CL:0000144!2.93e-11!625;CL:0002620!7.42e-10!23;CL:0000192!4.55e-09!42;CL:0000514!4.55e-09!42;CL:0002494!6.39e-08!16;CL:0002334!9.54e-08!12;CL:0000359!1.18e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000134;7.78e-12;55!CL:0000057;6.93e-11;73!CL:0002620;8.71e-11;23!CL:0000723;1.05e-10;61!CL:0000048;9.51e-10;58!CL:0002320;4.35e-09;188!CL:0000187;5.58e-09;55!CL:0002494;1.62e-08;16!CL:0002334;2.07e-08;12!CL:0000034;4.42e-08;69!CL:0000349;6.88e-08;19!CL:0000359;7.10e-08;32!CL:0000192;1.45e-07;43!CL:0000499;7.86e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.50e-27,76;CL:0000680,1.20e-16,58;CL:0000056,1.20e-16,58;CL:0000355,1.20e-16,58;CL:0000187,2.98e-15,55;CL:0000048,9.76e-13,427;CL:0000723,5.48e-12,433;CL:0000393,8.83e-12,61;CL:0000211,8.83e-12,61;CL:0000034,2.62e-11,441;CL:0000222,3.32e-11,121;CL:0002620,1.00e-10,23;CL:0000192,2.80e-10,43;CL:0000514,2.80e-10,43;CL:0002321,4.47e-10,250;CL:0002494,1.37e-08,16;CL:0002334,2.13e-08,12;CL:0000359,2.70e-08,32;CL:0000349,7.18e-08,19;CL:0000499,8.86e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;3.88e-09;58!CL:0000514;1.45e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.05e-21!143;UBERON:0000914!1.46e-19!83;UBERON:0002329!1.46e-19!83;UBERON:0003077!1.46e-19!83;UBERON:0003059!1.46e-19!83;UBERON:0007282!1.46e-19!83;UBERON:0009618!1.46e-19!83;UBERON:0007285!1.46e-19!83;UBERON:0004290!2.39e-17!70;UBERON:0003914!2.73e-16!118;UBERON:0000486!3.11e-16!82;UBERON:0004872!2.99e-14!84;UBERON:0001134!3.09e-14!61;UBERON:0002036!3.09e-14!61;UBERON:0003082!3.09e-14!61;UBERON:0002100!3.90e-14!216;UBERON:0002385!4.97e-14!63;UBERON:0001015!4.97e-14!63;UBERON:0000383!4.97e-14!63;UBERON:0000490!5.17e-14!138;UBERON:0002049!2.01e-12!79;UBERON:0007798!2.01e-12!79;UBERON:0000475!4.67e-12!365;UBERON:0000468!5.56e-12!659;UBERON:0004535!1.17e-10!110;UBERON:0001009!1.25e-10!113;UBERON:0000119!1.37e-10!312;UBERON:0000483!3.82e-10!309;UBERON:0003102!6.38e-10!95;UBERON:0000055!1.14e-09!69;UBERON:0002199!1.73e-09!45;UBERON:0002416!1.73e-09!45;UBERON:0001637!1.99e-09!42;UBERON:0003509!1.99e-09!42;UBERON:0004572!1.99e-09!42;UBERON:0001981!2.55e-09!60;UBERON:0007500!2.55e-09!60;UBERON:0004537!2.55e-09!60;UBERON:0006965!2.55e-09!60;UBERON:0003104!4.08e-09!238;UBERON:0009142!4.08e-09!238;UBERON:0000481!1.90e-08!347;UBERON:0000467!6.49e-08!625;UBERON:0002097!6.65e-08!40;UBERON:0000948!8.11e-08!24;UBERON:0005498!8.11e-08!24;UBERON:0004140!8.11e-08!24;UBERON:0009881!8.11e-08!24;UBERON:0004141!8.11e-08!24;UBERON:0003084!8.11e-08!24;UBERON:0007005!8.11e-08!24;UBERON:0004139!8.11e-08!24;UBERON:0004291!8.11e-08!24;UBERON:0000480!9.87e-08!626;UBERON:0007100!2.00e-07!27;UBERON:0004573!2.41e-07!33;UBERON:0004571!2.41e-07!33;UBERON:0004923!2.91e-07!57;UBERON:0001013!7.38e-07!14;UBERON:0000477!8.27e-07!286 | |ontology_enrichment_uberon=UBERON:0005256!3.05e-21!143;UBERON:0000914!1.46e-19!83;UBERON:0002329!1.46e-19!83;UBERON:0003077!1.46e-19!83;UBERON:0003059!1.46e-19!83;UBERON:0007282!1.46e-19!83;UBERON:0009618!1.46e-19!83;UBERON:0007285!1.46e-19!83;UBERON:0004290!2.39e-17!70;UBERON:0003914!2.73e-16!118;UBERON:0000486!3.11e-16!82;UBERON:0004872!2.99e-14!84;UBERON:0001134!3.09e-14!61;UBERON:0002036!3.09e-14!61;UBERON:0003082!3.09e-14!61;UBERON:0002100!3.90e-14!216;UBERON:0002385!4.97e-14!63;UBERON:0001015!4.97e-14!63;UBERON:0000383!4.97e-14!63;UBERON:0000490!5.17e-14!138;UBERON:0002049!2.01e-12!79;UBERON:0007798!2.01e-12!79;UBERON:0000475!4.67e-12!365;UBERON:0000468!5.56e-12!659;UBERON:0004535!1.17e-10!110;UBERON:0001009!1.25e-10!113;UBERON:0000119!1.37e-10!312;UBERON:0000483!3.82e-10!309;UBERON:0003102!6.38e-10!95;UBERON:0000055!1.14e-09!69;UBERON:0002199!1.73e-09!45;UBERON:0002416!1.73e-09!45;UBERON:0001637!1.99e-09!42;UBERON:0003509!1.99e-09!42;UBERON:0004572!1.99e-09!42;UBERON:0001981!2.55e-09!60;UBERON:0007500!2.55e-09!60;UBERON:0004537!2.55e-09!60;UBERON:0006965!2.55e-09!60;UBERON:0003104!4.08e-09!238;UBERON:0009142!4.08e-09!238;UBERON:0000481!1.90e-08!347;UBERON:0000467!6.49e-08!625;UBERON:0002097!6.65e-08!40;UBERON:0000948!8.11e-08!24;UBERON:0005498!8.11e-08!24;UBERON:0004140!8.11e-08!24;UBERON:0009881!8.11e-08!24;UBERON:0004141!8.11e-08!24;UBERON:0003084!8.11e-08!24;UBERON:0007005!8.11e-08!24;UBERON:0004139!8.11e-08!24;UBERON:0004291!8.11e-08!24;UBERON:0000480!9.87e-08!626;UBERON:0007100!2.00e-07!27;UBERON:0004573!2.41e-07!33;UBERON:0004571!2.41e-07!33;UBERON:0004923!2.91e-07!57;UBERON:0001013!7.38e-07!14;UBERON:0000477!8.27e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.92e-08;198!UBERON:0002385;2.00e-07;31!UBERON:0001015;2.00e-07;31!UBERON:0000383;2.00e-07;31!UBERON:0000948;2.97e-07;22!UBERON:0002199;3.43e-07;46!UBERON:0002416;3.43e-07;46!UBERON:0002097;3.98e-07;41!UBERON:0001637;4.36e-07;42!UBERON:0003509;4.36e-07;42!UBERON:0004572;4.36e-07;42!UBERON:0001013;7.63e-07;14 | |||
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|phase1_expression=32.1570731308885,85.2120085086113,31.0099689011137,53.0388481271591,31.2872766099101,80.2551442172339,25.3299878168311,13.8978372153903,4.70134130759709,0.982935746006035,4.88460817580699,13.980247816331,37.9824448648973,9.2824764720035,20.8780346708587,22.1867298329086,17.4781413126953,10.2243412654232,13.6621183661342,1.96993692922861,11.6280394009224,6.26909442956176,0.572471974262113,1.64249310087461,8.03472893406738,0,0,0.0787107813136792,0,0,0.309632246632152,0,0.30120591877825,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,302.320514229312,42.9248550210327,14.8320571738495,15.5418835525363,13.0347856765331,11.5877215168659,101.00131527549,477.388807766886,2.26883561193763,13.5254932452164,10.1888351404026,0.654895377488563,0,0.370784442784429,0.324547393654683,0,0.132957960518865,0,0,0,0.198762407366705,2.58070378531837,3.81854551768354,5.6530794192401,12.1654836500873,10.4544855937226,4.17989933073621,2.32575083252396,1.42306505074684,5.69025041699939,0.402829317109147,0,3.66093086322254,0.367663080345869,25.9245423322163,2.14319347881791,0.673588117878509,1.91439516821648,3.06633274931766,0.949265659568129,2.5648244150257,0,0,1.74437620857014,92.9337549670246,34.3168686611011,73.4870953513364,189.599006314966,30.8561492512571,33.6406560085384,28.8222288470203,64.8735652337131,40.1462235665699,35.9677494426067,25.663518788813,47.3748748528635,80.6646294271998,2.81185718200556,39.0200096037901,13.1208518955223,40.7994897906417,15.501353820977,12.6260896607143,10.6742613093709,5.10385428137233,13.3889405869827,13.7423288963768,7.12801714369232,22.2540236350701,11.8320977051943,17.2468354035897,6.39677233025452,15.0142223846357,5.81834642516784,9.65750765937843,26.9709260303137,15.0238058906597,11.9103792318022,71.9352439112336,15.3761319949369,41.7505845284337,63.3192212738089,21.0227159646415,84.5060971349664,17.681101351501,36.6244640963548,32.1542117031955,87.0896521142195,23.7488738497132,24.4085545796406,82.7172350563711,15.5158231270566,6.27374191548804,3.86521706326594,7.0913991353617,0.860413786167011,0.121973706129595,0,3.25343040034651,1.65857688024593,2.77552935963191,0.36497735907583,20.3384392028761,44.3836247353091,8.28809528114883,83.5862270457562,43.3127689001751,0,0.168584690078102,0,0,0,0,0,0,0.38474715694639,0.738155454624648,15.426595118379,12.7587943512734,20.5812195939759,15.2106041786197,13.7595810334868,7.08947888017685,0,4.42758378755209,3.08822058537346,8.88977311809867,0,0.301586917234893,0.833296006426766,2.93227474779292,7.27954349695705,5.77325368101093,0,25.7125040376449,4.47535988059329,5.09284063834272,5.51737041480335,0,0,0,0,0.148631162288728,0.93733833986777,12.0947132303179,1.41775097242386,18.7177312448953,8.13775027839093,15.3353071666084,0,0,0.207328115540772,0,0.12624243342638,0.126995788584338,0.763976851116555,0,6.84289784090821,7.09509699652932,1.20137223137567,0.857479297891735,4.26098120512371,16.5664826156646,7.333828582095,12.79789986002,46.4953379607447,37.193321112464,3.19125739901845,6.24044621468197,12.603161338845,19.858878483259,17.3174416360465,7.43485567022367,14.650783345569,15.6415663988346,10.0978217131058,4.26470338491055,3.95975936466715,4.22015127883421,5.22920075160176,1.79951384127703,0,0,4.21667878966063,23.4832358381751,40.2016775419399,14.2636905040718,20.2693829334611,61.642896765115,16.1154866915906,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,15.0910534814542,47.0160289796096,22.2437319433783,92.75500424274,151.664640477588,41.4757351539248,47.793697317027,12.6397361885642,9.09630016223939,21.729344971426,15.277188766315,28.577221123964,11.4686371097869,11.9438706052272,27.1083304810576,0,0,0.106727557803444,1.21251028578504,13.3148351608398,26.6103458130119,71.9512642674453,85.6317810947388,138.926746744371,30.4971175228568,44.5185306688032,70.9365792243309,54.9146845846467,34.0803423303869,37.4655240410698,11.8263104659885,16.0968873046923,23.0096549350719,6.88898862672247,50.7281369867311,0.184161977871793,5.39627906373652,14.5672934405374,14.4236856455367,1.35359883872224,1.46329140498388,1.56869953835371,2.92278449306521,3.58875538235777,5.68666920354483,3.40187410553031,8.63663664408557,15.4227252690289,5.1479823133332,4.01351819083883,0.509752546090077,0.831076008928724,4.02974558499921,0,0,0,2.29610251989794,0.325378394664303,5.97637867556789,0.366277859273374,0,4.59412430396938,9.75090369054782,14.4615536859744,8.60369392799886,20.4884660762477,32.0822680177611,15.4376961182674,36.9525642346861,65.1124955674886,20.8805237169447,11.1290044558422,18.8424803511515,19.4111968038757,17.3553288992634,18.4107161157101,7.90237433805386,219.739018087787,5.5762981612848,4.31247012246524,4.25844824253617,1.73986598415015,7.96894142146856,2.71937284809783,8.18748412591268,20.2482831819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| ||
|short_description=p8@FN1 | |short_description=p8@FN1 | ||
}} | }} |
Latest revision as of 04:00, 20 September 2015
Short description: | p8@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 209bp_to_ENST00000471193_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.50e-27 | 76 |
muscle precursor cell | 1.20e-16 | 58 |
myoblast | 1.20e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.20e-16 | 58 |
muscle cell | 2.98e-15 | 55 |
multi fate stem cell | 9.76e-13 | 427 |
somatic stem cell | 5.48e-12 | 433 |
electrically responsive cell | 8.83e-12 | 61 |
electrically active cell | 8.83e-12 | 61 |
stem cell | 2.62e-11 | 441 |
mesodermal cell | 3.32e-11 | 121 |
skin fibroblast | 1.00e-10 | 23 |
smooth muscle cell | 2.80e-10 | 43 |
smooth muscle myoblast | 2.80e-10 | 43 |
embryonic cell | 4.47e-10 | 250 |
cardiocyte | 1.37e-08 | 16 |
preadipocyte | 2.13e-08 | 12 |
vascular associated smooth muscle cell | 2.70e-08 | 32 |
extraembryonic cell | 7.18e-08 | 19 |
stromal cell | 8.86e-07 | 28 |