FFCP PHASE1:Hg19::chr2:216256439..216256547,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=458bp_to_uc002vez.2_5end | |association_with_transcript=458bp_to_uc002vez.2_5end | ||
|cluster_id=chr2:216256439..216256547,- | |||
|coexpression_cluster_id=C79 | |coexpression_cluster_id=C79 | ||
|description=CAGE_peak_5_at_FN1_5end | |description=CAGE_peak_5_at_FN1_5end | ||
|id=chr2:216256439..216256547,- | |id=chr2:216256439..216256547,- | ||
|ontology_enrichment_celltype=CL:0000055!2.24e-36!180;CL:0000057!1.43e-23!75;CL:0000680!4.85e-15!57;CL:0000056!4.85e-15!57;CL:0000355!4.85e-15!57;CL:0000183!1.05e-14!59;CL:0000220!9.17e-14!246;CL:0000187!9.20e-14!54;CL:0002321!2.15e-13!248;CL:0002371!3.98e-13!591;CL:0000222!4.64e-13!119;CL:0000393!2.38e-11!60;CL:0000211!2.38e-11!60;CL:0000144!3.31e-11!625;CL:0002620!7.19e-10!23;CL:0000192!2.82e-09!42;CL:0000514!2.82e-09!42;CL:0000359!3.90e-08!32;CL:0002334!4.80e-08!12;CL:0002494!2.86e-07!16 | |ontology_enrichment_celltype=CL:0000055!2.24e-36!180;CL:0000057!1.43e-23!75;CL:0000680!4.85e-15!57;CL:0000056!4.85e-15!57;CL:0000355!4.85e-15!57;CL:0000183!1.05e-14!59;CL:0000220!9.17e-14!246;CL:0000187!9.20e-14!54;CL:0002321!2.15e-13!248;CL:0002371!3.98e-13!591;CL:0000222!4.64e-13!119;CL:0000393!2.38e-11!60;CL:0000211!2.38e-11!60;CL:0000144!3.31e-11!625;CL:0002620!7.19e-10!23;CL:0000192!2.82e-09!42;CL:0000514!2.82e-09!42;CL:0000359!3.90e-08!32;CL:0002334!4.80e-08!12;CL:0002494!2.86e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000134;8.93e-12;55!CL:0000723;8.22e-11;61!CL:0000057;1.65e-10;73!CL:0002620;1.73e-10;23!CL:0000048;8.31e-10;58!CL:0000349;4.18e-09;19!CL:0002320;4.48e-09;188!CL:0000187;7.68e-09;55!CL:0002334;1.20e-08;12!CL:0000359;1.94e-08;32!CL:0000034;3.57e-08;69!CL:0002494;8.30e-08;16!CL:0000192;2.01e-07;43!CL:0000499;8.69e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.04e-26,76;CL:0000680,3.49e-16,58;CL:0000056,3.49e-16,58;CL:0000355,3.49e-16,58;CL:0000187,8.55e-15,55;CL:0000048,1.93e-12,427;CL:0000222,2.81e-12,121;CL:0000723,4.14e-12,433;CL:0002321,7.54e-12,250;CL:0000393,9.69e-12,61;CL:0000211,9.69e-12,61;CL:0000034,2.13e-11,441;CL:0002620,1.25e-10,23;CL:0000192,6.36e-10,43;CL:0000514,6.36e-10,43;CL:0000349,4.40e-09,19;CL:0000359,9.75e-09,32;CL:0002334,1.22e-08,12;CL:0002494,8.57e-08,16;CL:0000499,8.46e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;4.23e-09;58!CL:0000514;2.01e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!9.55e-20!143;UBERON:0000914!3.45e-18!83;UBERON:0002329!3.45e-18!83;UBERON:0003077!3.45e-18!83;UBERON:0003059!3.45e-18!83;UBERON:0007282!3.45e-18!83;UBERON:0009618!3.45e-18!83;UBERON:0007285!3.45e-18!83;UBERON:0004290!7.02e-17!70;UBERON:0000486!3.25e-16!82;UBERON:0003914!8.35e-16!118;UBERON:0004872!5.02e-15!84;UBERON:0002100!1.44e-14!216;UBERON:0001134!2.92e-14!61;UBERON:0002036!2.92e-14!61;UBERON:0003082!2.92e-14!61;UBERON:0002385!4.11e-14!63;UBERON:0001015!4.11e-14!63;UBERON:0000383!4.11e-14!63;UBERON:0000490!1.17e-13!138;UBERON:0000475!6.39e-13!365;UBERON:0000468!6.51e-13!659;UBERON:0002049!1.17e-12!79;UBERON:0007798!1.17e-12!79;UBERON:0000119!3.66e-11!312;UBERON:0002199!6.10e-11!45;UBERON:0002416!6.10e-11!45;UBERON:0000483!1.12e-10!309;UBERON:0004535!2.52e-10!110;UBERON:0001009!3.13e-10!113;UBERON:0000055!3.96e-10!69;UBERON:0001637!4.24e-10!42;UBERON:0003509!4.24e-10!42;UBERON:0004572!4.24e-10!42;UBERON:0003102!4.49e-10!95;UBERON:0001981!7.77e-10!60;UBERON:0007500!7.77e-10!60;UBERON:0004537!7.77e-10!60;UBERON:0006965!7.77e-10!60;UBERON:0003104!1.68e-09!238;UBERON:0009142!1.68e-09!238;UBERON:0002097!3.62e-09!40;UBERON:0000467!2.12e-08!625;UBERON:0000481!2.33e-08!347;UBERON:0004923!2.41e-08!57;UBERON:0000480!3.29e-08!626;UBERON:0004573!5.16e-08!33;UBERON:0004571!5.16e-08!33;UBERON:0000948!2.13e-07!24;UBERON:0005498!2.13e-07!24;UBERON:0004140!2.13e-07!24;UBERON:0009881!2.13e-07!24;UBERON:0004141!2.13e-07!24;UBERON:0003084!2.13e-07!24;UBERON:0007005!2.13e-07!24;UBERON:0004139!2.13e-07!24;UBERON:0004291!2.13e-07!24;UBERON:0001013!4.79e-07!14;UBERON:0007100!6.22e-07!27;UBERON:0005631!9.11e-07!14;UBERON:0000158!9.11e-07!14 | |ontology_enrichment_uberon=UBERON:0005256!9.55e-20!143;UBERON:0000914!3.45e-18!83;UBERON:0002329!3.45e-18!83;UBERON:0003077!3.45e-18!83;UBERON:0003059!3.45e-18!83;UBERON:0007282!3.45e-18!83;UBERON:0009618!3.45e-18!83;UBERON:0007285!3.45e-18!83;UBERON:0004290!7.02e-17!70;UBERON:0000486!3.25e-16!82;UBERON:0003914!8.35e-16!118;UBERON:0004872!5.02e-15!84;UBERON:0002100!1.44e-14!216;UBERON:0001134!2.92e-14!61;UBERON:0002036!2.92e-14!61;UBERON:0003082!2.92e-14!61;UBERON:0002385!4.11e-14!63;UBERON:0001015!4.11e-14!63;UBERON:0000383!4.11e-14!63;UBERON:0000490!1.17e-13!138;UBERON:0000475!6.39e-13!365;UBERON:0000468!6.51e-13!659;UBERON:0002049!1.17e-12!79;UBERON:0007798!1.17e-12!79;UBERON:0000119!3.66e-11!312;UBERON:0002199!6.10e-11!45;UBERON:0002416!6.10e-11!45;UBERON:0000483!1.12e-10!309;UBERON:0004535!2.52e-10!110;UBERON:0001009!3.13e-10!113;UBERON:0000055!3.96e-10!69;UBERON:0001637!4.24e-10!42;UBERON:0003509!4.24e-10!42;UBERON:0004572!4.24e-10!42;UBERON:0003102!4.49e-10!95;UBERON:0001981!7.77e-10!60;UBERON:0007500!7.77e-10!60;UBERON:0004537!7.77e-10!60;UBERON:0006965!7.77e-10!60;UBERON:0003104!1.68e-09!238;UBERON:0009142!1.68e-09!238;UBERON:0002097!3.62e-09!40;UBERON:0000467!2.12e-08!625;UBERON:0000481!2.33e-08!347;UBERON:0004923!2.41e-08!57;UBERON:0000480!3.29e-08!626;UBERON:0004573!5.16e-08!33;UBERON:0004571!5.16e-08!33;UBERON:0000948!2.13e-07!24;UBERON:0005498!2.13e-07!24;UBERON:0004140!2.13e-07!24;UBERON:0009881!2.13e-07!24;UBERON:0004141!2.13e-07!24;UBERON:0003084!2.13e-07!24;UBERON:0007005!2.13e-07!24;UBERON:0004139!2.13e-07!24;UBERON:0004291!2.13e-07!24;UBERON:0001013!4.79e-07!14;UBERON:0007100!6.22e-07!27;UBERON:0005631!9.11e-07!14;UBERON:0000158!9.11e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.04e-08;198!UBERON:0001637;4.36e-08;42!UBERON:0003509;4.36e-08;42!UBERON:0004572;4.36e-08;42!UBERON:0004573;6.35e-08;33!UBERON:0004571;6.35e-08;33!UBERON:0002097;6.55e-08;41!UBERON:0002199;7.68e-08;46!UBERON:0002416;7.68e-08;46!UBERON:0002385;1.24e-07;31!UBERON:0001015;1.24e-07;31!UBERON:0000383;1.24e-07;31!UBERON:0001013;1.80e-07;14!UBERON:0000478;2.83e-07;24!UBERON:0000948;3.61e-07;22 | |||
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|phase1_expression=58.8637948836603,91.4209237014498,63.288527439091,51.0373821600965,19.2193270603734,63.6807122593269,58.2589719787114,20.8467558230854,4.70134130759709,3.93174298402414,2.79120467188971,13.7618064442009,38.2462118431258,11.6340371782444,19.8838425436749,22.1867298329086,16.8754467846714,10.9546513558106,12.1983199697627,2.95490539384291,6.9360235023046,5.32873026512749,0.572471974262113,1.64249310087461,4.3939923858181,0.0764134057479513,0,0,0,0,0.619264493264304,0,0.6024118375565,1.10926203050036,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,226.740385671984,45.6076584598473,14.4484694883189,17.3490793144592,23.5628817998868,18.2506613890638,391.280685949141,683.721992775203,2.3633704291017,8.86917589850256,7.29028721252946,0.523916301990851,0,0,0,0.174129737299267,0.132957960518865,0,0,0,2.58391129576717,1.72046919021225,5.55424802572151,9.61023501270816,10.0679864690377,7.15306909044175,5.64286409649389,2.32575083252396,3.5576626268671,8.70273593188143,2.81980521976403,0.760272105718513,5.12530320851156,1.10298924103761,20.253548697044,1.51809538082936,1.34717623575702,1.46394924628319,0,1.89853131913626,1.83201743930407,0,0,3.05265836499774,111.321717179751,43.5608960126154,86.3307858902187,224.87991066707,35.4668382198357,15.6989728039846,49.1045380356643,67.0935731694675,37.9677463187715,27.0768450860073,18.7981188580478,58.7266819262334,73.7505183334399,3.28050004567315,51.8185727538332,11.9799082524334,43.0412199989187,7.98554590777601,6.96053660782966,4.9157782345787,4.89970011011744,7.12439040408254,10.2292523364008,3.56400857184616,27.4466291499198,19.1133886006986,7.90479955997862,6.73344455816265,10.7601927089889,4.71008996323111,10.0964852802593,19.6152189311373,17.878329009885,11.1163539496821,73.0115817253668,23.4913127700424,61.8841151385921,63.6193123698933,34.7287023533539,69.0476647322286,25.3118924610962,59.4092689489257,44.9184593793126,94.915099115787,32.9538637139432,39.9265760342465,94.787561201936,21.2586927260321,8.98671139245584,7.15065156704198,11.4553370648151,2.29443676311203,0.487894824518382,0,3.95059405756363,1.55491582523056,3.28017106138317,0,14.0804579096834,43.0971428589233,19.3388889893473,55.7241513638375,35.3720946018097,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0.738155454624648,14.0241773803446,13.9935163852676,30.8718293909638,19.0132552232746,15.725235466842,5.31710916013264,0,4.30459534900897,4.11762744716461,15.4747902426162,1.1240175325762,0.201057944823262,1.01847289674383,3.25808305310325,10.3993478527958,8.6598805215164,0.115930404975077,23.9513736241076,3.46479474626577,6.48179717607255,4.94660795809955,0.790204397959275,0,0,0,0.148631162288728,0,10.2469098201304,1.41775097242386,19.7924335173295,9.00965209393282,15.7186898457737,0,0,0,0,0,0.063497894292169,2.67391897890794,0,8.55362230113526,7.81488944545259,2.10240140490742,0.285826432630578,7.62491373548453,16.5664826156646,8.9472708701559,17.1931381957844,110.873498214084,31.276201844572,7.97814349754611,10.4007436911366,8.74505072491283,11.3479305618623,11.9889980557245,8.29272363217256,27.1310802695722,18.1112874091769,10.7492940816933,5.68627117988073,9.50342247520115,8.13886318060882,7.84380112740265,3.09916272664377,1.2162378064119,0.502257091432126,6.32501818449095,31.8701057803805,32.1613420335519,18.5427976552934,22.2963212268072,44.3828856708828,23.8151081109061,0,0,0,0,0.76228387266739,1.30139853857622,0,0.335032530668698,1.27587750330633,0,0,0,14.9683619897351,34.5117659531177,19.8023467300807,55.1122783056639,106.343677323108,35.6407457976692,35.962414402763,24.0756879782175,18.1926003244788,38.2850363782268,20.5909935545985,28.9459594610474,15.8128178331911,22.7129342656779,18.5297448857862,0,0,0,4.24378600024763,26.6296703216795,25.0983943463635,126.783089795395,100.824516450257,130.787604005812,60.7379567472023,88.013646839473,106.646149718212,77.1773945513953,25.7530188650435,58.7729310786451,20.4496618474385,16.6161417338759,18.0126086612937,9.66875596732978,73.5858746013055,0.276242966807689,6.31479464905337,12.20010825645,12.5879438361047,2.25599806453706,2.84956747286335,4.70609861506113,4.38417673959782,3.0609972378934,1.13733384070897,2.72149928442425,8.2048048118813,12.3381802152231,5.68987518842091,12.5422443463713,0.509752546090077,0.831076008928724,2.46262230194396,0,0,0.512900250232778,3.28014645699706,2.27764876265012,11.6436343161926,0.457847324091717,0.660075999364704,14.9309039879005,9.75090369054782,19.2820715812991,25.6177403474123,14.9427158601205,20.5694924133014,13.6458206759685,48.4465304355914,41.4747744594694,19.0907645412066,18.6076954501681,36.0321115486932,25.9456590942893,32.6688543986135,26.1998652415874,19.9883586197833,264.757183684568,5.5762981612848,7.70083950440222,11.1784266366575,2.60979897622522,15.0112617474175,3.00562262158182,7.44316738719335,22.4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| ||
|short_description=p5@FN1 | |short_description=p5@FN1 | ||
}} | }} |
Latest revision as of 03:05, 20 September 2015
Short description: | p5@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 458bp_to_uc002vez.2_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.04e-26 | 76 |
muscle precursor cell | 3.49e-16 | 58 |
myoblast | 3.49e-16 | 58 |
multi-potent skeletal muscle stem cell | 3.49e-16 | 58 |
muscle cell | 8.55e-15 | 55 |
multi fate stem cell | 1.93e-12 | 427 |
mesodermal cell | 2.81e-12 | 121 |
somatic stem cell | 4.14e-12 | 433 |
embryonic cell | 7.54e-12 | 250 |
electrically responsive cell | 9.69e-12 | 61 |
electrically active cell | 9.69e-12 | 61 |
stem cell | 2.13e-11 | 441 |
skin fibroblast | 1.25e-10 | 23 |
smooth muscle cell | 6.36e-10 | 43 |
smooth muscle myoblast | 6.36e-10 | 43 |
extraembryonic cell | 4.40e-09 | 19 |
vascular associated smooth muscle cell | 9.75e-09 | 32 |
preadipocyte | 1.22e-08 | 12 |
cardiocyte | 8.57e-08 | 16 |
stromal cell | 8.46e-07 | 28 |