FFCP PHASE1:Hg19::chr2:216246960..216247057,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt=P02751 | |UniProt=P02751 | ||
|association_with_transcript=0bp_to_M10905,M14059_5end | |association_with_transcript=0bp_to_M10905,M14059_5end | ||
|cluster_id=chr2:216246960..216247057,- | |||
|coexpression_cluster_id=C79 | |coexpression_cluster_id=C79 | ||
|description=CAGE_peak_13_at_FN1_5end | |description=CAGE_peak_13_at_FN1_5end | ||
|id=chr2:216246960..216247057,- | |id=chr2:216246960..216247057,- | ||
|ontology_enrichment_celltype=CL:0000055!1.65e-35!180;CL:0000057!4.09e-23!75;CL:0000680!4.70e-15!57;CL:0000056!4.70e-15!57;CL:0000355!4.70e-15!57;CL:0000183!2.87e-14!59;CL:0000187!8.79e-14!54;CL:0000220!3.57e-13!246;CL:0002371!8.13e-13!591;CL:0002321!1.34e-12!248;CL:0000222!1.18e-11!119;CL:0000393!1.89e-11!60;CL:0000211!1.89e-11!60;CL:0000144!2.16e-10!625;CL:0000192!1.34e-09!42;CL:0000514!1.34e-09!42;CL:0002620!1.66e-09!23;CL:0000359!5.61e-08!32;CL:0002334!1.56e-07!12;CL:0002494!2.23e-07!16 | |ontology_enrichment_celltype=CL:0000055!1.65e-35!180;CL:0000057!4.09e-23!75;CL:0000680!4.70e-15!57;CL:0000056!4.70e-15!57;CL:0000355!4.70e-15!57;CL:0000183!2.87e-14!59;CL:0000187!8.79e-14!54;CL:0000220!3.57e-13!246;CL:0002371!8.13e-13!591;CL:0002321!1.34e-12!248;CL:0000222!1.18e-11!119;CL:0000393!1.89e-11!60;CL:0000211!1.89e-11!60;CL:0000144!2.16e-10!625;CL:0000192!1.34e-09!42;CL:0000514!1.34e-09!42;CL:0002620!1.66e-09!23;CL:0000359!5.61e-08!32;CL:0002334!1.56e-07!12;CL:0002494!2.23e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000134;9.94e-12;55!CL:0000723;7.04e-11;61!CL:0000057;1.97e-10;73!CL:0002620;2.47e-10;23!CL:0000048;8.39e-10;58!CL:0000187;4.10e-09;55!CL:0002320;7.40e-09;188!CL:0000349;1.37e-08;19!CL:0000359;2.52e-08;32!CL:0002334;4.50e-08;12!CL:0000192;5.09e-08;43!CL:0002494;5.16e-08;16!CL:0000034;8.00e-08;69!CL:0000499;3.44e-07;28!CL:0000393;3.79e-07;61!CL:0000211;3.79e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.80e-26,76;CL:0000680,6.73e-17,58;CL:0000056,6.73e-17,58;CL:0000355,6.73e-17,58;CL:0000187,1.71e-15,55;CL:0000048,3.30e-13,427;CL:0000723,1.03e-12,433;CL:0000393,2.02e-12,61;CL:0000211,2.02e-12,61;CL:0000222,6.28e-12,121;CL:0000034,9.75e-12,441;CL:0002321,1.01e-11,250;CL:0000192,7.15e-11,43;CL:0000514,7.15e-11,43;CL:0002620,2.77e-10,23;CL:0000359,1.32e-08,32;CL:0000349,1.49e-08,19;CL:0002334,4.04e-08,12;CL:0002494,5.97e-08,16;CL:0000499,3.54e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;2.96e-09;58!CL:0000514;5.09e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002384;3.18e-08;198!UBERON:0004573;4.23e-08;33!UBERON:0004571;4.23e-08;33!UBERON:0001637;5.17e-08;42!UBERON:0003509;5.17e-08;42!UBERON:0004572;5.17e-08;42!UBERON:0000948;1.97e-07;22!UBERON:0000478;3.26e-07;24!UBERON:0007100;4.48e-07;25!UBERON:0002385;5.97e-07;31!UBERON:0001015;5.97e-07;31!UBERON:0000383;5.97e-07;31!UBERON:0000947;7.74e-07;21!UBERON:0010191;7.74e-07;21!UBERON:0002097;7.86e-07;41!UBERON:0002199;8.20e-07;46!UBERON:0002416;8.20e-07;46 | |||
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| ||
|short_description=p13@FN1 | |short_description=p13@FN1 | ||
}} | }} |
Latest revision as of 02:28, 20 September 2015
Short description: | p13@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 0bp_to_M10905, M14059_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | P02751 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.80e-26 | 76 |
muscle precursor cell | 6.73e-17 | 58 |
myoblast | 6.73e-17 | 58 |
multi-potent skeletal muscle stem cell | 6.73e-17 | 58 |
muscle cell | 1.71e-15 | 55 |
multi fate stem cell | 3.30e-13 | 427 |
somatic stem cell | 1.03e-12 | 433 |
electrically responsive cell | 2.02e-12 | 61 |
electrically active cell | 2.02e-12 | 61 |
mesodermal cell | 6.28e-12 | 121 |
stem cell | 9.75e-12 | 441 |
embryonic cell | 1.01e-11 | 250 |
smooth muscle cell | 7.15e-11 | 43 |
smooth muscle myoblast | 7.15e-11 | 43 |
skin fibroblast | 2.77e-10 | 23 |
vascular associated smooth muscle cell | 1.32e-08 | 32 |
extraembryonic cell | 1.49e-08 | 19 |
preadipocyte | 4.04e-08 | 12 |
cardiocyte | 5.97e-08 | 16 |
stromal cell | 3.54e-07 | 28 |