FFCP PHASE1:Hg19::chr2:105467904..105467924,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000413121,ENST00000443988,ENST00000458253,uc002tck.1_5end | |association_with_transcript=0bp_to_ENST00000413121,ENST00000443988,ENST00000458253,uc002tck.1_5end | ||
|cluster_id=chr2:105467904..105467924,- | |||
|coexpression_cluster_id=C919 | |coexpression_cluster_id=C919 | ||
|description=CAGE_peak_1_at_ENST00000413121_5end,CAGE_peak_1_at_ENST00000443988_5end,CAGE_peak_1_at_ENST00000458253_5end,CAGE_peak_1_at_uc002tck.1_5end | |description=CAGE_peak_1_at_ENST00000413121_5end,CAGE_peak_1_at_ENST00000443988_5end,CAGE_peak_1_at_ENST00000458253_5end,CAGE_peak_1_at_uc002tck.1_5end | ||
|id=chr2:105467904..105467924,- | |id=chr2:105467904..105467924,- | ||
|ontology_enrichment_celltype=CL:0000128!7.65e-10!7;CL:0000126!7.65e-10!7;CL:0000127!7.65e-10!7;CL:0002453!7.65e-10!7;CL:0002319!1.66e-09!25;CL:0002605!2.84e-07!3 | |ontology_enrichment_celltype=CL:0000128!7.65e-10!7;CL:0000126!7.65e-10!7;CL:0000127!7.65e-10!7;CL:0002453!7.65e-10!7;CL:0002319!1.66e-09!25;CL:0002605!2.84e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002319;6.43e-10;25!CL:0000128;1.26e-09;7!CL:0000126;1.26e-09;7!CL:0000127;1.26e-09;7!CL:0002605;2.56e-09;3!CL:0000047;8.21e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.97e-10,25;CL:0000128,1.26e-09,7;CL:0000126,1.26e-09,7;CL:0000127,1.26e-09,7;CL:0002453,1.26e-09,7;CL:0002605,2.56e-09,3;CL:0000047,6.60e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.14e-12;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.49e-76!57;UBERON:0005068!2.49e-76!57;UBERON:0006241!2.49e-76!57;UBERON:0007135!2.49e-76!57;UBERON:0001017!2.94e-75!82;UBERON:0005743!6.37e-71!86;UBERON:0002616!3.92e-67!59;UBERON:0000073!5.78e-67!94;UBERON:0001016!5.78e-67!94;UBERON:0000955!2.93e-62!69;UBERON:0006238!2.93e-62!69;UBERON:0002780!8.20e-58!41;UBERON:0001890!8.20e-58!41;UBERON:0006240!8.20e-58!41;UBERON:0001893!5.14e-57!34;UBERON:0002020!1.25e-56!34;UBERON:0003528!1.25e-56!34;UBERON:0003080!3.66e-56!42;UBERON:0002791!3.58e-55!33;UBERON:0001869!1.75e-53!32;UBERON:0003075!3.39e-51!86;UBERON:0007284!3.39e-51!86;UBERON:0002346!3.58e-48!90;UBERON:0000956!5.81e-42!25;UBERON:0000203!5.81e-42!25;UBERON:0007023!1.01e-37!115;UBERON:0003056!5.25e-37!61;UBERON:0002619!2.76e-36!22;UBERON:0001950!3.50e-33!20;UBERON:0004121!1.08e-32!169;UBERON:0000924!1.71e-31!173;UBERON:0006601!1.71e-31!173;UBERON:0000033!7.49e-31!123;UBERON:0000153!7.59e-30!129;UBERON:0007811!7.59e-30!129;UBERON:0003076!2.83e-20!15;UBERON:0003057!2.83e-20!15;UBERON:0000025!7.88e-19!194;UBERON:0004732!9.89e-18!13;UBERON:0004733!3.33e-16!12;UBERON:0002028!3.33e-16!12;UBERON:0007277!3.33e-16!12;UBERON:0002420!7.42e-16!9;UBERON:0007245!7.42e-16!9;UBERON:0010009!7.42e-16!9;UBERON:0010011!7.42e-16!9;UBERON:0000454!7.42e-16!9;UBERON:0002308!8.57e-16!9;UBERON:0000125!8.57e-16!9;UBERON:0004111!5.39e-14!241;UBERON:0000064!1.28e-13!219;UBERON:0009663!7.96e-13!7;UBERON:0000477!1.44e-12!286;UBERON:0002680!9.57e-12!9;UBERON:0001895!9.57e-12!9;UBERON:0010092!9.57e-12!9;UBERON:0000200!1.62e-11!6;UBERON:0001871!2.70e-11!7;UBERON:0002298!9.76e-11!8;UBERON:0002021!2.24e-10!5;UBERON:0001872!3.72e-10!5;UBERON:0000489!4.00e-10!32;UBERON:0000483!9.07e-10!309;UBERON:0000119!1.63e-09!312;UBERON:0000349!1.76e-09!5;UBERON:0000475!3.87e-09!365;UBERON:0000369!5.37e-08!4;UBERON:0002435!5.37e-08!4;UBERON:0000204!5.37e-08!4;UBERON:0010082!5.37e-08!4;UBERON:0002037!2.31e-07!6;UBERON:0006215!2.31e-07!6;UBERON:0000481!3.24e-07!347;UBERON:0002113!5.31e-07!27;UBERON:0003918!5.31e-07!27;UBERON:0005095!5.31e-07!27;UBERON:0007687!5.31e-07!27 | |ontology_enrichment_uberon=UBERON:0001049!2.49e-76!57;UBERON:0005068!2.49e-76!57;UBERON:0006241!2.49e-76!57;UBERON:0007135!2.49e-76!57;UBERON:0001017!2.94e-75!82;UBERON:0005743!6.37e-71!86;UBERON:0002616!3.92e-67!59;UBERON:0000073!5.78e-67!94;UBERON:0001016!5.78e-67!94;UBERON:0000955!2.93e-62!69;UBERON:0006238!2.93e-62!69;UBERON:0002780!8.20e-58!41;UBERON:0001890!8.20e-58!41;UBERON:0006240!8.20e-58!41;UBERON:0001893!5.14e-57!34;UBERON:0002020!1.25e-56!34;UBERON:0003528!1.25e-56!34;UBERON:0003080!3.66e-56!42;UBERON:0002791!3.58e-55!33;UBERON:0001869!1.75e-53!32;UBERON:0003075!3.39e-51!86;UBERON:0007284!3.39e-51!86;UBERON:0002346!3.58e-48!90;UBERON:0000956!5.81e-42!25;UBERON:0000203!5.81e-42!25;UBERON:0007023!1.01e-37!115;UBERON:0003056!5.25e-37!61;UBERON:0002619!2.76e-36!22;UBERON:0001950!3.50e-33!20;UBERON:0004121!1.08e-32!169;UBERON:0000924!1.71e-31!173;UBERON:0006601!1.71e-31!173;UBERON:0000033!7.49e-31!123;UBERON:0000153!7.59e-30!129;UBERON:0007811!7.59e-30!129;UBERON:0003076!2.83e-20!15;UBERON:0003057!2.83e-20!15;UBERON:0000025!7.88e-19!194;UBERON:0004732!9.89e-18!13;UBERON:0004733!3.33e-16!12;UBERON:0002028!3.33e-16!12;UBERON:0007277!3.33e-16!12;UBERON:0002420!7.42e-16!9;UBERON:0007245!7.42e-16!9;UBERON:0010009!7.42e-16!9;UBERON:0010011!7.42e-16!9;UBERON:0000454!7.42e-16!9;UBERON:0002308!8.57e-16!9;UBERON:0000125!8.57e-16!9;UBERON:0004111!5.39e-14!241;UBERON:0000064!1.28e-13!219;UBERON:0009663!7.96e-13!7;UBERON:0000477!1.44e-12!286;UBERON:0002680!9.57e-12!9;UBERON:0001895!9.57e-12!9;UBERON:0010092!9.57e-12!9;UBERON:0000200!1.62e-11!6;UBERON:0001871!2.70e-11!7;UBERON:0002298!9.76e-11!8;UBERON:0002021!2.24e-10!5;UBERON:0001872!3.72e-10!5;UBERON:0000489!4.00e-10!32;UBERON:0000483!9.07e-10!309;UBERON:0000119!1.63e-09!312;UBERON:0000349!1.76e-09!5;UBERON:0000475!3.87e-09!365;UBERON:0000369!5.37e-08!4;UBERON:0002435!5.37e-08!4;UBERON:0000204!5.37e-08!4;UBERON:0010082!5.37e-08!4;UBERON:0002037!2.31e-07!6;UBERON:0006215!2.31e-07!6;UBERON:0000481!3.24e-07!347;UBERON:0002113!5.31e-07!27;UBERON:0003918!5.31e-07!27;UBERON:0005095!5.31e-07!27;UBERON:0007687!5.31e-07!27 | ||
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|short_description=p1@ENST00000413121,p1@ENST00000443988,p1@ENST00000458253,p1@uc002tck.1 | |short_description=p1@ENST00000413121,p1@ENST00000443988,p1@ENST00000458253,p1@uc002tck.1 | ||
}} | }} |
Latest revision as of 22:56, 28 July 2015
Short description: | p1@ENST00000413121, p1@ENST00000443988, p1@ENST00000458253, p1@uc002tck.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000413121_5end, CAGE_peak_1_at_ENST00000443988_5end, CAGE_peak_1_at_ENST00000458253_5end, CAGE_peak_1_at_uc002tck.1_5end |
Coexpression cluster: | C919_Neurons_Neural_parietal_Astrocyte_duodenum_occipital_temporal |
Association with transcript: | 0bp_to_ENST00000413121, ENST00000443988, ENST00000458253, uc002tck.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.97e-10 | 25 |
oligodendrocyte | 1.26e-09 | 7 |
macroglial cell | 1.26e-09 | 7 |
astrocyte | 1.26e-09 | 7 |
oligodendrocyte precursor cell | 1.26e-09 | 7 |
astrocyte of the cerebral cortex | 2.56e-09 | 3 |
neuronal stem cell | 6.60e-09 | 8 |