FFCP PHASE1:Hg19::chr22:19950097..19950117,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1312 | |EntrezGene=1312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2228 | |HGNC=2228 | ||
|TSSclassifier=strong | |||
|UniProt=P21964 | |UniProt=P21964 | ||
|association_with_transcript=27bp_to_ENST00000449653,NM_007310_5end | |association_with_transcript=27bp_to_ENST00000449653,NM_007310_5end | ||
|cluster_id=chr22:19950097..19950117,+ | |||
|coexpression_cluster_id=C2638 | |coexpression_cluster_id=C2638 | ||
|description=CAGE_peak_5_at_COMT_5end | |description=CAGE_peak_5_at_COMT_5end | ||
|id=chr22:19950097..19950117,+ | |id=chr22:19950097..19950117,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.03e-17!254;CL:0000223!1.65e-13!59;CL:0002076!2.37e-13!43;CL:0002251!2.19e-07!21 | |ontology_enrichment_celltype=CL:0000066!5.03e-17!254;CL:0000223!1.65e-13!59;CL:0002076!2.37e-13!43;CL:0002251!2.19e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.04e-14;42!CL:0002251;1.85e-09;20!CL:0002368;8.53e-09;13!CL:0000349;6.72e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,4.39e-21,58;CL:0002076,4.55e-19,42;CL:0000066,4.04e-15,253;CL:0002251,1.86e-09,20;CL:0002368,9.62e-09,13;CL:0000349,8.18e-08,19 | |||
|ontology_enrichment_development_v019=CL:0000223;4.23e-12;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;3.53e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.26e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.05e-20!169;UBERON:0000925!8.05e-20!169;UBERON:0006595!8.05e-20!169;UBERON:0001007!2.45e-16!155;UBERON:0001555!2.45e-16!155;UBERON:0007026!2.45e-16!155;UBERON:0000481!6.91e-14!347;UBERON:0000468!8.77e-14!659;UBERON:0004921!3.49e-13!129;UBERON:0004185!3.49e-13!129;UBERON:0000475!1.24e-12!365;UBERON:0004111!3.82e-12!241;UBERON:0000077!6.92e-12!130;UBERON:0000922!1.26e-10!612;UBERON:0000477!1.64e-10!286;UBERON:0001004!2.69e-10!72;UBERON:0000161!1.21e-09!35;UBERON:0000467!1.24e-09!625;UBERON:0000480!1.90e-09!626;UBERON:0000064!3.79e-09!219;UBERON:0002050!5.48e-09!605;UBERON:0005423!5.48e-09!605;UBERON:0000466!6.48e-09!126;UBERON:0000062!7.54e-09!511;UBERON:0000923!8.77e-09!604;UBERON:0005291!8.77e-09!604;UBERON:0006598!8.77e-09!604;UBERON:0002532!8.77e-09!604;UBERON:0005911!1.64e-08!82;UBERON:0000166!1.97e-08!21;UBERON:0000483!3.24e-08!309;UBERON:0009569!5.00e-08!113;UBERON:0000119!5.51e-08!312;UBERON:0003104!7.11e-08!238;UBERON:0009142!7.11e-08!238;UBERON:0001041!8.90e-08!98;UBERON:0000915!3.05e-07!52;UBERON:0000464!4.57e-07!104;UBERON:0000153!6.27e-07!129;UBERON:0007811!6.27e-07!129;UBERON:0000165!8.01e-07!28;UBERON:0000930!8.01e-07!28 | |ontology_enrichment_uberon=UBERON:0004119!8.05e-20!169;UBERON:0000925!8.05e-20!169;UBERON:0006595!8.05e-20!169;UBERON:0001007!2.45e-16!155;UBERON:0001555!2.45e-16!155;UBERON:0007026!2.45e-16!155;UBERON:0000481!6.91e-14!347;UBERON:0000468!8.77e-14!659;UBERON:0004921!3.49e-13!129;UBERON:0004185!3.49e-13!129;UBERON:0000475!1.24e-12!365;UBERON:0004111!3.82e-12!241;UBERON:0000077!6.92e-12!130;UBERON:0000922!1.26e-10!612;UBERON:0000477!1.64e-10!286;UBERON:0001004!2.69e-10!72;UBERON:0000161!1.21e-09!35;UBERON:0000467!1.24e-09!625;UBERON:0000480!1.90e-09!626;UBERON:0000064!3.79e-09!219;UBERON:0002050!5.48e-09!605;UBERON:0005423!5.48e-09!605;UBERON:0000466!6.48e-09!126;UBERON:0000062!7.54e-09!511;UBERON:0000923!8.77e-09!604;UBERON:0005291!8.77e-09!604;UBERON:0006598!8.77e-09!604;UBERON:0002532!8.77e-09!604;UBERON:0005911!1.64e-08!82;UBERON:0000166!1.97e-08!21;UBERON:0000483!3.24e-08!309;UBERON:0009569!5.00e-08!113;UBERON:0000119!5.51e-08!312;UBERON:0003104!7.11e-08!238;UBERON:0009142!7.11e-08!238;UBERON:0001041!8.90e-08!98;UBERON:0000915!3.05e-07!52;UBERON:0000464!4.57e-07!104;UBERON:0000153!6.27e-07!129;UBERON:0007811!6.27e-07!129;UBERON:0000165!8.01e-07!28;UBERON:0000930!8.01e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.87e-10;33!UBERON:0002365;1.59e-09;31!UBERON:0002330;1.59e-09;31!UBERON:0000161;2.19e-09;19!UBERON:0000166;2.19e-09;19!UBERON:0000478;1.28e-08;24!UBERON:0001555;2.99e-08;54!UBERON:0000165;4.14e-08;28!UBERON:0005178;1.30e-07;34!UBERON:0002224;1.30e-07;34!UBERON:0007196;1.49e-07;15!UBERON:0001558;1.49e-07;15!UBERON:0001007;1.51e-07;81!UBERON:0005631;3.99e-07;10!UBERON:0000158;3.99e-07;10!UBERON:0000915;7.45e-07;52 | |||
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|short_description=p5@COMT | |short_description=p5@COMT | ||
}} | }} |
Latest revision as of 04:06, 19 September 2015
Short description: | p5@COMT |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_COMT_5end |
Coexpression cluster: | C2638_breast_bronchogenic_Amniotic_liver_endometrioid_Hepatocyte_serous |
Association with transcript: | 27bp_to_ENST00000449653, NM_007310_5end |
EntrezGene: | COMT |
HGNC: | 2228 |
UniProt: | P21964 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 4.39e-21 | 58 |
endo-epithelial cell | 4.55e-19 | 42 |
epithelial cell | 4.04e-15 | 253 |
epithelial cell of alimentary canal | 1.86e-09 | 20 |
respiratory epithelial cell | 9.62e-09 | 13 |
extraembryonic cell | 8.18e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.26e-07 | 14 |