FFCP PHASE1:Hg19::chr19:14544083..14544090,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:14544083..14544090,+
|short_description=p6@PKN1
|description=CAGE_peak_6_at_PKN1_5end
|association_with_transcript=-75bp_to_NM_002741,uc002myp.2_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5585 | |EntrezGene=5585 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9405 | |HGNC=9405 | ||
|TSSclassifier=strong | |||
|UniProt=Q16512 | |UniProt=Q16512 | ||
|association_with_transcript=-75bp_to_NM_002741,uc002myp.2_5end | |||
|cluster_id=chr19:14544083..14544090,+ | |||
|description=CAGE_peak_6_at_PKN1_5end | |||
|id=chr19:14544083..14544090,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002601;1.31e-14;1!CL:1000746;1.59e-08;7!CL:1000612;1.59e-08;7!CL:0000650;5.94e-08;2!CL:1000500;5.94e-08;2!CL:1000618;5.94e-08;2!CL:1001318;5.94e-08;2!CL:0002173;5.94e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002601,2.11e-14,1;CL:1000746,1.92e-08,7;CL:1000612,1.92e-08,7;CL:0000650,9.19e-08,2;CL:1000500,9.19e-08,2;CL:1000618,9.19e-08,2;CL:1001318,9.19e-08,2;CL:0002173,9.19e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.94e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;5.94e-08;2!DOID:962;5.94e-08;2!DOID:3307;5.94e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.82e-08,2;DOID:3193,5.74e-08,2;DOID:962,5.74e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;6.32e-19;3!UBERON:0005382;6.32e-19;3!UBERON:0001874;4.71e-15;1!UBERON:0000369;1.90e-14;4!UBERON:0002435;1.90e-14;4!UBERON:0000204;1.90e-14;4!UBERON:0009663;1.20e-08;7!UBERON:0000074;1.59e-08;7!UBERON:0001229;1.59e-08;7!UBERON:0001873;5.94e-08;2!UBERON:0003714;5.94e-08;2!UBERON:0003567;5.94e-08;2!UBERON:0003838;5.94e-08;2!UBERON:0003586;5.94e-08;2!UBERON:0005169;5.94e-08;2!UBERON:0002321;5.94e-08;2!UBERON:0005215;5.94e-08;2!UBERON:0002303;5.94e-08;2!UBERON:0002319;5.94e-08;2!UBERON:0000473;1.44e-07;8!UBERON:0002420;6.50e-07;9!UBERON:0000125;6.50e-07;9!UBERON:0007245;6.50e-07;9!UBERON:0002308;6.50e-07;9!UBERON:0010009;6.50e-07;9!UBERON:0010011;6.50e-07;9!UBERON:0000454;6.50e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,6.63e-19,3;UBERON:0005382,6.63e-19,3;UBERON:0001874,4.73e-15,1;UBERON:0000369,1.97e-14,4;UBERON:0002435,1.97e-14,4;UBERON:0000204,1.97e-14,4;UBERON:0010082,1.97e-14,4;UBERON:0009663,1.22e-08,7;UBERON:0010532,1.92e-08,7;UBERON:0000074,1.92e-08,7;UBERON:0001229,1.92e-08,7;UBERON:0001230,1.92e-08,7;UBERON:0003220,1.92e-08,7;UBERON:0005749,1.92e-08,7;UBERON:0004199,1.92e-08,7;UBERON:0004209,1.92e-08,7;UBERON:0004198,1.92e-08,7;UBERON:0003714,5.74e-08,2;UBERON:0001873,6.15e-08,2;UBERON:0010122,6.15e-08,2;UBERON:0003567,9.19e-08,2;UBERON:0003838,9.19e-08,2;UBERON:0003586,9.19e-08,2;UBERON:0005169,9.19e-08,2;UBERON:0002321,9.19e-08,2;UBERON:0005215,9.19e-08,2;UBERON:0002303,9.19e-08,2;UBERON:0002319,9.19e-08,2;UBERON:0000473,1.27e-07,8;UBERON:0005103,1.70e-07,8;UBERON:0000083,1.70e-07,8;UBERON:0009201,1.70e-07,8;UBERON:0006553,1.70e-07,8;UBERON:0003074,1.70e-07,8;UBERON:0003060,1.70e-07,8;UBERON:0002420,6.60e-07,9;UBERON:0000125,6.60e-07,9;UBERON:0007245,6.60e-07,9;UBERON:0002308,6.60e-07,9;UBERON:0010009,6.60e-07,9;UBERON:0010011,6.60e-07,9;UBERON:0000454,6.60e-07,9;UBERON:0000080,9.37e-07,9;UBERON:0002120,9.37e-07,9;UBERON:0004875,9.37e-07,9;UBERON:0005721,9.37e-07,9;UBERON:0005754,9.37e-07,9;UBERON:0007297,9.37e-07,9 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0,0,0.697801167972428,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0,0,0.626909442956176,0,0.410623275218653,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0.296573126324121,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0,0,0,0.950452044448374,0.301150238155546,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0.189069634328136,0,0.175669571386252,0.523916301990851,0,0,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0,0,0.275118041940067,0.417989933073621,0.258416759169329,0,0,1.20848795132744,0,0.488124115096339,0,0,0.0892997282840798,0.44905874525234,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0,0.311211035399766,0,0.490385709340376,0,0.576175924479999,0,0,0,0.597794722207204,0,0,0.140450806702248,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0.718618141816238,0,0.125118519871964,0.554128230968366,0.877955241761676,0,1.05166641234618,0,0,0,0,0,0.206105058476878,0,0.37223371266318,0.168776332241266,0,0,0.0920498986422993,0.323292113637624,0,0.10075209822764,0,0,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0.482022059766964,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0.264145302039678,0,0,0.12624243342638,0.063497894292169,0,1.17217447210047,0,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0.112085143993527,0.197030760201927,0.215627574859517,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0,0,0.157702415033935,0.35142424497814,0.300946099727719,0,0,0,0.553107505625109,0.0868836144680828,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0.164254312027618,0,0,0.241718899183244,0.200506470303285,0,0,0.364182336013434,0.786746489756545,0,0,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0,0,0,1.00337954770971,0,0,0.895499018888713,0,0,0.512900250232778,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.096670718292122,0,0.307007349452259,0.275673144969061,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0.616067160352178,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0,0,0,0.42793898803392,0.636406495851874,0,0.179872457583315,0,0,0.202182481573316,0,0,0.975267478179181,0,0,0,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0.811641507850816,0,0.281695602532241,0.286822704408103,0,1.07001315444375,1.06428319221179,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0.849523652246594,0,0.284136146806413,0,0,0,0,0.703347082052564,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0.622079175323615,0.0898683511473268,0,0.511572370226872,0,0,0,0,0.185536196323703,0,0,0,0,0.227586896570999,0,0,0,0,0,0,1.08536794762867,0,0.110579259931225,0,0.438770794307945,0,0,0.153900517007594,0,0,0.179515288819544,0,0,0.274792780205587,0,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0,0.326465616318295,0,0.432777279484182,0,0.0884575645033392,0,0,0.247127877893006,0,0.269604531922708,0.802577647298789,0.468528891450678,0,0,0.242780379534093,0,0,0.61214552326098,0.126373159256976,0,0.72581733978073,0.664653872707185,0.330991955875499,0.627865836814451,1.19472429772959,0.284609546029793,0.138674673013139,0.347119476670262,0,0,0,0.343972064943233,0,0,0,0.0969890164884194,0.176512253383001,0.225980740780532,0,0.19871461170299,0.316553979779393,0,0.0801588202515337,0,0.19980960958213,0.288180834308212,0.458146384663663,0,0.14405479798815,0,0,0.271808412147228,0.209205692624666,0.203996435272644,0.288950589901519,0.600420288709789,0,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0.134366944973453,0.720599767084807,0,0.236349546921671,0,0,0,0,0,0.408610218334727,0.160753148465019,0,0,0,0,0.303747783290123,0,0,0,0.316801009558219,0.179287339332845,0,0,0,0.25426853765475,0,0,0.653174720218818,0,0.164185041498678,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0.12202626490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| ||
|short_description=p6@PKN1 | |||
}} | }} |
Latest revision as of 04:51, 16 September 2015
Short description: | p6@PKN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PKN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -75bp_to_NM_002741, uc002myp.2_5end |
EntrezGene: | PKN1 |
HGNC: | 9405 |
UniProt: | Q16512 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine smooth muscle cell | 2.11e-14 | 1 |
glomerular cell | 1.92e-08 | 7 |
kidney corpuscule cell | 1.92e-08 | 7 |
mesangial cell | 9.19e-08 | 2 |
kidney interstitial cell | 9.19e-08 | 2 |
juxtaglomerular complex cell | 9.19e-08 | 2 |
renal interstitial pericyte | 9.19e-08 | 2 |
extraglomerular mesangial cell | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.82e-08 | 2 |
peripheral nerve sheath neoplasm | 5.74e-08 | 2 |
neurofibroma | 5.74e-08 | 2 |