FFCP PHASE1:Hg19::chr1:87012899..87012917,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22802 | |EntrezGene=22802 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2018 | |HGNC=2018 | ||
|TSSclassifier=strong | |||
|UniProt=A8MQC9 | |UniProt=A8MQC9 | ||
|association_with_transcript=-8bp_to_ENST00000263723_5end | |association_with_transcript=-8bp_to_ENST00000263723_5end | ||
|cluster_id=chr1:87012899..87012917,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_2_at_CLCA4_5end | |description=CAGE_peak_2_at_CLCA4_5end | ||
|id=chr1:87012899..87012917,+ | |id=chr1:87012899..87012917,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.33e-17;82!UBERON:0006241;9.22e-16;3!UBERON:0003057;9.22e-16;3!UBERON:0010122;4.30e-11;2!UBERON:0002532;5.99e-08;206!UBERON:0010316;5.99e-08;206 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.09e-100!57;UBERON:0005068!5.09e-100!57;UBERON:0006241!5.09e-100!57;UBERON:0007135!5.09e-100!57;UBERON:0002616!3.45e-82!59;UBERON:0007023!2.81e-75!115;UBERON:0001017!1.52e-72!82;UBERON:0000955!1.30e-71!69;UBERON:0006238!1.30e-71!69;UBERON:0002780!3.58e-71!41;UBERON:0001890!3.58e-71!41;UBERON:0006240!3.58e-71!41;UBERON:0002020!9.34e-70!34;UBERON:0003528!9.34e-70!34;UBERON:0001893!1.69e-69!34;UBERON:0003080!2.54e-69!42;UBERON:0005743!9.47e-69!86;UBERON:0002791!1.32e-66!33;UBERON:0003075!2.64e-66!86;UBERON:0007284!2.64e-66!86;UBERON:0000073!1.28e-64!94;UBERON:0001016!1.28e-64!94;UBERON:0001869!3.97e-63!32;UBERON:0002346!6.48e-63!90;UBERON:0002619!3.67e-48!22;UBERON:0003056!1.60e-45!61;UBERON:0000033!8.15e-45!123;UBERON:0000153!1.44e-44!129;UBERON:0007811!1.44e-44!129;UBERON:0000956!5.07e-42!25;UBERON:0000203!5.07e-42!25;UBERON:0001950!5.88e-42!20;UBERON:0004121!1.08e-36!169;UBERON:0000924!1.34e-35!173;UBERON:0006601!1.34e-35!173;UBERON:0002308!1.27e-30!9;UBERON:0000125!1.27e-30!9;UBERON:0002420!1.46e-30!9;UBERON:0007245!1.46e-30!9;UBERON:0010009!1.46e-30!9;UBERON:0010011!1.46e-30!9;UBERON:0000454!1.46e-30!9;UBERON:0003076!2.28e-30!15;UBERON:0003057!2.28e-30!15;UBERON:0000025!6.07e-25!194;UBERON:0004732!1.83e-24!13;UBERON:0009663!2.54e-24!7;UBERON:0004111!1.56e-22!241;UBERON:0004733!2.32e-21!12;UBERON:0002028!2.32e-21!12;UBERON:0007277!2.32e-21!12;UBERON:0002298!5.16e-21!8;UBERON:0000200!1.05e-19!6;UBERON:0000477!2.60e-18!286;UBERON:0000064!5.00e-18!219;UBERON:0000349!2.17e-17!5;UBERON:0000475!2.56e-15!365;UBERON:0001871!7.36e-15!7;UBERON:0000369!3.61e-14!4;UBERON:0002435!3.61e-14!4;UBERON:0000204!3.61e-14!4;UBERON:0010082!3.61e-14!4;UBERON:0000483!2.37e-13!309;UBERON:0000119!4.06e-13!312;UBERON:0002680!6.19e-13!9;UBERON:0001895!6.19e-13!9;UBERON:0010092!6.19e-13!9;UBERON:0000988!1.90e-11!3;UBERON:0006331!1.96e-11!3;UBERON:0002240!2.68e-11!3;UBERON:0002771!3.65e-11!3;UBERON:0005383!3.91e-11!3;UBERON:0005382!3.91e-11!3;UBERON:0001896!4.64e-11!3;UBERON:0005290!4.64e-11!3;UBERON:0010096!4.64e-11!3;UBERON:0002021!4.70e-11!5;UBERON:0001872!7.34e-11!5;UBERON:0000062!1.01e-10!511;UBERON:0000481!5.93e-09!347;UBERON:0001897!1.22e-08!2;UBERON:0001875!1.75e-08!2;UBERON:0006514!1.75e-08!2;UBERON:0005162!3.44e-08!2;UBERON:0000122!3.44e-08!2;UBERON:0001873!3.82e-08!2;UBERON:0010122!3.82e-08!2;UBERON:0001954!4.24e-08!2;UBERON:0003022!4.24e-08!2;UBERON:0002421!4.24e-08!2;UBERON:0002600!4.24e-08!2;UBERON:0002148!5.22e-08!2;UBERON:0009662!5.22e-08!2;UBERON:0001876!5.99e-08!2;UBERON:0001870!1.31e-07!2;UBERON:0003127!2.46e-07!2;UBERON:0000923!4.36e-07!604;UBERON:0005291!4.36e-07!604;UBERON:0006598!4.36e-07!604;UBERON:0002532!4.36e-07!604;UBERON:0002050!4.70e-07!605;UBERON:0005423!4.70e-07!605;UBERON:0000467!5.25e-07!625;UBERON:0000480!5.65e-07!626;UBERON:0005174!6.35e-07!5;UBERON:0001137!6.35e-07!5;UBERON:0000922!7.93e-07!612 | |ontology_enrichment_uberon=UBERON:0001049!5.09e-100!57;UBERON:0005068!5.09e-100!57;UBERON:0006241!5.09e-100!57;UBERON:0007135!5.09e-100!57;UBERON:0002616!3.45e-82!59;UBERON:0007023!2.81e-75!115;UBERON:0001017!1.52e-72!82;UBERON:0000955!1.30e-71!69;UBERON:0006238!1.30e-71!69;UBERON:0002780!3.58e-71!41;UBERON:0001890!3.58e-71!41;UBERON:0006240!3.58e-71!41;UBERON:0002020!9.34e-70!34;UBERON:0003528!9.34e-70!34;UBERON:0001893!1.69e-69!34;UBERON:0003080!2.54e-69!42;UBERON:0005743!9.47e-69!86;UBERON:0002791!1.32e-66!33;UBERON:0003075!2.64e-66!86;UBERON:0007284!2.64e-66!86;UBERON:0000073!1.28e-64!94;UBERON:0001016!1.28e-64!94;UBERON:0001869!3.97e-63!32;UBERON:0002346!6.48e-63!90;UBERON:0002619!3.67e-48!22;UBERON:0003056!1.60e-45!61;UBERON:0000033!8.15e-45!123;UBERON:0000153!1.44e-44!129;UBERON:0007811!1.44e-44!129;UBERON:0000956!5.07e-42!25;UBERON:0000203!5.07e-42!25;UBERON:0001950!5.88e-42!20;UBERON:0004121!1.08e-36!169;UBERON:0000924!1.34e-35!173;UBERON:0006601!1.34e-35!173;UBERON:0002308!1.27e-30!9;UBERON:0000125!1.27e-30!9;UBERON:0002420!1.46e-30!9;UBERON:0007245!1.46e-30!9;UBERON:0010009!1.46e-30!9;UBERON:0010011!1.46e-30!9;UBERON:0000454!1.46e-30!9;UBERON:0003076!2.28e-30!15;UBERON:0003057!2.28e-30!15;UBERON:0000025!6.07e-25!194;UBERON:0004732!1.83e-24!13;UBERON:0009663!2.54e-24!7;UBERON:0004111!1.56e-22!241;UBERON:0004733!2.32e-21!12;UBERON:0002028!2.32e-21!12;UBERON:0007277!2.32e-21!12;UBERON:0002298!5.16e-21!8;UBERON:0000200!1.05e-19!6;UBERON:0000477!2.60e-18!286;UBERON:0000064!5.00e-18!219;UBERON:0000349!2.17e-17!5;UBERON:0000475!2.56e-15!365;UBERON:0001871!7.36e-15!7;UBERON:0000369!3.61e-14!4;UBERON:0002435!3.61e-14!4;UBERON:0000204!3.61e-14!4;UBERON:0010082!3.61e-14!4;UBERON:0000483!2.37e-13!309;UBERON:0000119!4.06e-13!312;UBERON:0002680!6.19e-13!9;UBERON:0001895!6.19e-13!9;UBERON:0010092!6.19e-13!9;UBERON:0000988!1.90e-11!3;UBERON:0006331!1.96e-11!3;UBERON:0002240!2.68e-11!3;UBERON:0002771!3.65e-11!3;UBERON:0005383!3.91e-11!3;UBERON:0005382!3.91e-11!3;UBERON:0001896!4.64e-11!3;UBERON:0005290!4.64e-11!3;UBERON:0010096!4.64e-11!3;UBERON:0002021!4.70e-11!5;UBERON:0001872!7.34e-11!5;UBERON:0000062!1.01e-10!511;UBERON:0000481!5.93e-09!347;UBERON:0001897!1.22e-08!2;UBERON:0001875!1.75e-08!2;UBERON:0006514!1.75e-08!2;UBERON:0005162!3.44e-08!2;UBERON:0000122!3.44e-08!2;UBERON:0001873!3.82e-08!2;UBERON:0010122!3.82e-08!2;UBERON:0001954!4.24e-08!2;UBERON:0003022!4.24e-08!2;UBERON:0002421!4.24e-08!2;UBERON:0002600!4.24e-08!2;UBERON:0002148!5.22e-08!2;UBERON:0009662!5.22e-08!2;UBERON:0001876!5.99e-08!2;UBERON:0001870!1.31e-07!2;UBERON:0003127!2.46e-07!2;UBERON:0000923!4.36e-07!604;UBERON:0005291!4.36e-07!604;UBERON:0006598!4.36e-07!604;UBERON:0002532!4.36e-07!604;UBERON:0002050!4.70e-07!605;UBERON:0005423!4.70e-07!605;UBERON:0000467!5.25e-07!625;UBERON:0000480!5.65e-07!626;UBERON:0005174!6.35e-07!5;UBERON:0001137!6.35e-07!5;UBERON:0000922!7.93e-07!612 | ||
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|short_description=p2@CLCA4 | |short_description=p2@CLCA4 | ||
}} | }} |
Latest revision as of 14:34, 19 September 2015
Short description: | p2@CLCA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLCA4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -8bp_to_ENST00000263723_5end |
EntrezGene: | CLCA4 |
HGNC: | 2018 |
UniProt: | A8MQC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data