FFCP PHASE1:Hg19::chr1:218518858..218518869,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7042 | |EntrezGene=7042 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11768 | |HGNC=11768 | ||
|TSSclassifier=strong | |||
|UniProt=P61812 | |UniProt=P61812 | ||
|association_with_transcript=182bp_to_NM_001135599,NM_003238_5end | |association_with_transcript=182bp_to_NM_001135599,NM_003238_5end | ||
|cluster_id=chr1:218518858..218518869,+ | |||
|coexpression_cluster_id=C2566 | |coexpression_cluster_id=C2566 | ||
|description=CAGE_peak_21_at_TGFB2_5end | |description=CAGE_peak_21_at_TGFB2_5end | ||
|id=chr1:218518858..218518869,+ | |id=chr1:218518858..218518869,+ | ||
|ontology_enrichment_celltype=CL:0000243!1.49e-07!15;CL:0000125!1.49e-07!15;CL:0000030!1.49e-07!15;CL:0000339!1.49e-07!15 | |ontology_enrichment_celltype=CL:0000243!1.49e-07!15;CL:0000125!1.49e-07!15;CL:0000030!1.49e-07!15;CL:0000339!1.49e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.74e-16;3!CL:0000067;1.74e-16;3!CL:0005012;1.74e-16;3!CL:0002304;1.74e-16;3!CL:0000306;4.77e-13;4!CL:0002222;4.77e-13;4!CL:0002224;4.77e-13;4!CL:1000415;2.15e-07;2!CL:0000075;2.93e-07;27!CL:0000054;3.92e-07;2!CL:0002575;3.92e-07;2!CL:0000137;3.92e-07;2!CL:0000092;3.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,7.30e-17,3;CL:0000067,7.30e-17,3;CL:0005012,7.30e-17,3;CL:0002304,7.30e-17,3;CL:0000306,4.78e-13,4;CL:0002222,4.78e-13,4;CL:0002224,4.78e-13,4;CL:1000415,2.15e-07,2;CL:0000075,2.44e-07,27;CL:0002575,3.28e-07,2;CL:0000054,3.93e-07,2;CL:0000137,3.93e-07,2;CL:0000092,3.93e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:200;3.92e-07;2!DOID:4305;3.92e-07;2!DOID:4929;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:200,3.93e-07,2;DOID:4305,3.93e-07,2;DOID:4929,5.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000955!1.02e-16!69;UBERON:0006238!1.02e-16!69;UBERON:0003075!4.65e-16!86;UBERON:0007284!4.65e-16!86;UBERON:0001017!1.38e-15!82;UBERON:0002346!1.44e-15!90;UBERON:0000119!5.37e-15!312;UBERON:0000033!8.92e-15!123;UBERON:0002616!1.37e-14!59;UBERON:0000483!2.33e-14!309;UBERON:0005743!3.06e-14!86;UBERON:0001049!3.63e-14!57;UBERON:0005068!3.63e-14!57;UBERON:0006241!3.63e-14!57;UBERON:0007135!3.63e-14!57;UBERON:0000153!2.55e-13!129;UBERON:0007811!2.55e-13!129;UBERON:0000073!3.33e-13!94;UBERON:0001016!3.33e-13!94;UBERON:0000025!1.25e-12!194;UBERON:0000477!2.60e-12!286;UBERON:0004111!8.64e-12!241;UBERON:0003056!1.12e-11!61;UBERON:0001893!3.34e-11!34;UBERON:0001869!5.09e-11!32;UBERON:0004121!8.58e-11!169;UBERON:0000924!1.12e-10!173;UBERON:0006601!1.12e-10!173;UBERON:0002791!1.31e-10!33;UBERON:0002020!3.01e-10!34;UBERON:0003528!3.01e-10!34;UBERON:0002780!3.53e-10!41;UBERON:0001890!3.53e-10!41;UBERON:0006240!3.53e-10!41;UBERON:0003080!8.99e-10!42;UBERON:0000956!4.36e-09!25;UBERON:0000203!4.36e-09!25;UBERON:0000475!7.03e-09!365;UBERON:0000481!2.21e-07!347;UBERON:0002619!8.97e-07!22 | |ontology_enrichment_uberon=UBERON:0000955!1.02e-16!69;UBERON:0006238!1.02e-16!69;UBERON:0003075!4.65e-16!86;UBERON:0007284!4.65e-16!86;UBERON:0001017!1.38e-15!82;UBERON:0002346!1.44e-15!90;UBERON:0000119!5.37e-15!312;UBERON:0000033!8.92e-15!123;UBERON:0002616!1.37e-14!59;UBERON:0000483!2.33e-14!309;UBERON:0005743!3.06e-14!86;UBERON:0001049!3.63e-14!57;UBERON:0005068!3.63e-14!57;UBERON:0006241!3.63e-14!57;UBERON:0007135!3.63e-14!57;UBERON:0000153!2.55e-13!129;UBERON:0007811!2.55e-13!129;UBERON:0000073!3.33e-13!94;UBERON:0001016!3.33e-13!94;UBERON:0000025!1.25e-12!194;UBERON:0000477!2.60e-12!286;UBERON:0004111!8.64e-12!241;UBERON:0003056!1.12e-11!61;UBERON:0001893!3.34e-11!34;UBERON:0001869!5.09e-11!32;UBERON:0004121!8.58e-11!169;UBERON:0000924!1.12e-10!173;UBERON:0006601!1.12e-10!173;UBERON:0002791!1.31e-10!33;UBERON:0002020!3.01e-10!34;UBERON:0003528!3.01e-10!34;UBERON:0002780!3.53e-10!41;UBERON:0001890!3.53e-10!41;UBERON:0006240!3.53e-10!41;UBERON:0003080!8.99e-10!42;UBERON:0000956!4.36e-09!25;UBERON:0000203!4.36e-09!25;UBERON:0000475!7.03e-09!365;UBERON:0000481!2.21e-07!347;UBERON:0002619!8.97e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.69e-17;11!UBERON:0001778;1.74e-16;3!UBERON:0002114;1.74e-16;2!UBERON:0001775;1.74e-16;3!UBERON:0001801;8.24e-14;14!UBERON:0010077;4.77e-13;4!UBERON:0005389;4.77e-13;4!UBERON:0000484;4.77e-13;4!UBERON:0000965;4.77e-13;4!UBERON:0001803;4.77e-13;4!UBERON:0004913;5.37e-13;1!UBERON:0003703;5.37e-13;1!UBERON:0001174;5.37e-13;1!UBERON:0004914;5.37e-13;1!UBERON:0000488;1.31e-12;4!UBERON:0002108;2.84e-10;4!UBERON:0000019;3.07e-10;19!UBERON:0000047;3.07e-10;19!UBERON:0004088;3.07e-10;19!UBERON:0010230;3.07e-10;19!UBERON:0006876;4.03e-10;11!UBERON:0000970;9.75e-10;20!UBERON:0002104;2.77e-09;21!UBERON:0001456;2.77e-09;21!UBERON:0002203;1.04e-08;6!UBERON:0001768;1.04e-08;6!UBERON:0002200;1.04e-08;6!UBERON:0000020;1.71e-08;23!UBERON:0005409;2.09e-08;22!UBERON:0004921;3.64e-08;33!UBERON:0001032;3.81e-08;24!UBERON:0004456;3.81e-08;24!UBERON:0002294;9.88e-08;7!UBERON:0001173;9.88e-08;7!UBERON:0006562;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.06e-17,11;UBERON:0001778,7.30e-17,3;UBERON:0001775,7.30e-17,3;UBERON:0002114,2.20e-16,2;UBERON:0001801,5.72e-14,14;UBERON:0010077,4.78e-13,4;UBERON:0005389,4.78e-13,4;UBERON:0000484,4.78e-13,4;UBERON:0002546,4.78e-13,4;UBERON:0000965,4.78e-13,4;UBERON:0001803,4.78e-13,4;UBERON:0003073,4.78e-13,4;UBERON:0005426,4.78e-13,4;UBERON:0000488,6.84e-13,4;UBERON:0004913,9.73e-13,1;UBERON:0003703,9.73e-13,1;UBERON:0001174,9.73e-13,1;UBERON:0004914,9.73e-13,1;UBERON:0006876,2.94e-10,11;UBERON:0002108,3.27e-10,4;UBERON:0000019,7.58e-10,20;UBERON:0000047,7.58e-10,20;UBERON:0010312,7.58e-10,20;UBERON:0004088,7.58e-10,20;UBERON:0010230,7.58e-10,20;UBERON:0003072,7.58e-10,20;UBERON:0004128,7.58e-10,20;UBERON:0003071,7.58e-10,20;UBERON:0000970,2.19e-09,21;UBERON:0002104,2.19e-09,21;UBERON:0001456,5.72e-09,22;UBERON:0002203,6.77e-09,6;UBERON:0001768,6.77e-09,6;UBERON:0002200,6.77e-09,6;UBERON:0000020,3.09e-08,24;UBERON:0001032,3.09e-08,24;UBERON:0004456,3.09e-08,24;UBERON:0005409,1.92e-07,25;UBERON:0000076,5.88e-07,8 | |||
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| ||
|short_description=p21@TGFB2 | |short_description=p21@TGFB2 | ||
}} | }} |
Latest revision as of 04:30, 25 September 2015
Short description: | p21@TGFB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_TGFB2_5end |
Coexpression cluster: | C2566_Lens_gall_papillotubular_anaplastic_Ciliary_osteoclastoma_alveolar |
Association with transcript: | 182bp_to_NM_001135599, NM_003238_5end |
EntrezGene: | TGFB2 |
HGNC: | 11768 |
UniProt: | P61812 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 7.30e-17 | 3 |
ciliated epithelial cell | 7.30e-17 | 3 |
multi-ciliated epithelial cell | 7.30e-17 | 3 |
non-pigmented ciliary epithelial cell | 7.30e-17 | 3 |
crystallin accumulating cell | 4.78e-13 | 4 |
vertebrate lens cell | 4.78e-13 | 4 |
lens epithelial cell | 4.78e-13 | 4 |
epithelial cell of gall bladder | 2.15e-07 | 2 |
columnar/cuboidal epithelial cell | 2.44e-07 | 27 |
central nervous system pericyte | 3.28e-07 | 2 |
bone matrix secreting cell | 3.93e-07 | 2 |
osteocyte | 3.93e-07 | 2 |
osteoclast | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 3.93e-07 | 2 |
bone giant cell tumor | 3.93e-07 | 2 |
tubular adenocarcinoma | 5.28e-07 | 2 |