FFCP PHASE1:Hg19::chr1:167059705..167059714,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10223 | |EntrezGene=10223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4445 | |HGNC=4445 | ||
|TSSclassifier=strong | |||
|UniProt=E9PMB2 | |UniProt=E9PMB2 | ||
|association_with_transcript=-142bp_to_ENST00000534512_5end | |association_with_transcript=-142bp_to_ENST00000534512_5end | ||
|cluster_id=chr1:167059705..167059714,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_6_at_GPA33_5end | |description=CAGE_peak_6_at_GPA33_5end | ||
|id=chr1:167059705..167059714,- | |id=chr1:167059705..167059714,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.26e-25;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!5.88e-45!11;UBERON:0000160!7.84e-45!27;UBERON:0001155!1.14e-35!9;UBERON:0005409!7.51e-35!35;UBERON:0001154!6.31e-21!1;UBERON:0001153!6.31e-21!1;UBERON:0004907!1.31e-16!5;UBERON:0002108!1.25e-12!14;UBERON:0004921!1.96e-09!129;UBERON:0004185!1.96e-09!129;UBERON:0001007!8.71e-08!155;UBERON:0001555!8.71e-08!155;UBERON:0007026!8.71e-08!155;UBERON:0004119!4.19e-07!169;UBERON:0000925!4.19e-07!169;UBERON:0006595!4.19e-07!169 | |ontology_enrichment_uberon=UBERON:0000059!5.88e-45!11;UBERON:0000160!7.84e-45!27;UBERON:0001155!1.14e-35!9;UBERON:0005409!7.51e-35!35;UBERON:0001154!6.31e-21!1;UBERON:0001153!6.31e-21!1;UBERON:0004907!1.31e-16!5;UBERON:0002108!1.25e-12!14;UBERON:0004921!1.96e-09!129;UBERON:0004185!1.96e-09!129;UBERON:0001007!8.71e-08!155;UBERON:0001555!8.71e-08!155;UBERON:0007026!8.71e-08!155;UBERON:0004119!4.19e-07!169;UBERON:0000925!4.19e-07!169;UBERON:0006595!4.19e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;6.51e-67;17!UBERON:0005409;1.88e-52;22!UBERON:0002108;4.68e-45;4!UBERON:0001155;3.36e-44;9!UBERON:0000059;2.70e-36;11!UBERON:0004921;4.84e-32;33!UBERON:0001154;1.26e-25;1!UBERON:0001153;1.26e-25;1!UBERON:0009854;1.26e-25;1!UBERON:0001555;3.21e-13;54!UBERON:0002114;1.60e-09;2!UBERON:0001007;9.23e-09;81!UBERON:0009856;2.04e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.84e-67,17;UBERON:0005409,2.00e-46,25;UBERON:0002108,5.45e-45,4;UBERON:0001155,3.18e-44,9;UBERON:0000059,2.58e-36,11;UBERON:0001154,1.26e-25,1;UBERON:0001153,1.26e-25,1;UBERON:0001045,1.26e-25,1;UBERON:0004921,3.14e-10,118;UBERON:0002114,1.67e-09,2;UBERON:0001007,2.52e-08,145;UBERON:0001555,2.52e-08,145;UBERON:0007026,2.52e-08,145;UBERON:0004119,1.54e-07,160;UBERON:0000925,1.54e-07,160;UBERON:0006595,1.54e-07,160 | |||
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|short_description=p6@GPA33 | |short_description=p6@GPA33 | ||
}} | }} |
Latest revision as of 10:48, 18 September 2015
Short description: | p6@GPA33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GPA33_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -142bp_to_ENST00000534512_5end |
EntrezGene: | GPA33 |
HGNC: | 4445 |
UniProt: | E9PMB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 6.84e-67 | 17 |
gastrointestinal system | 2.00e-46 | 25 |
small intestine | 5.45e-45 | 4 |
colon | 3.18e-44 | 9 |
large intestine | 2.58e-36 | 11 |
vermiform appendix | 1.26e-25 | 1 |
caecum | 1.26e-25 | 1 |
midgut | 1.26e-25 | 1 |
subdivision of digestive tract | 3.14e-10 | 118 |
duodenum | 1.67e-09 | 2 |
digestive system | 2.52e-08 | 145 |
digestive tract | 2.52e-08 | 145 |
primitive gut | 2.52e-08 | 145 |
endoderm-derived structure | 1.54e-07 | 160 |
endoderm | 1.54e-07 | 160 |
presumptive endoderm | 1.54e-07 | 160 |