FFCP PHASE1:Hg19::chr17:42984643..42984662,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=42bp_to_BC012228_5end | |association_with_transcript=42bp_to_BC012228_5end | ||
|cluster_id=chr17:42984643..42984662,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_10_at_GFAP_5end | |description=CAGE_peak_10_at_GFAP_5end | ||
|id=chr17:42984643..42984662,- | |id=chr17:42984643..42984662,- | ||
|ontology_enrichment_celltype=CL:0002605!4.93e-10!3;CL:0000047!7.35e-09!8;CL:0002319!2.69e-07!25;CL:0000128!3.10e-07!7;CL:0000126!3.10e-07!7;CL:0000127!3.10e-07!7;CL:0002453!3.10e-07!7 | |ontology_enrichment_celltype=CL:0002605!4.93e-10!3;CL:0000047!7.35e-09!8;CL:0002319!2.69e-07!25;CL:0000128!3.10e-07!7;CL:0000126!3.10e-07!7;CL:0000127!3.10e-07!7;CL:0002453!3.10e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.44e-12;3!CL:0000128;3.84e-09;7!CL:0000126;3.84e-09;7!CL:0000127;3.84e-09;7!CL:0000047;1.94e-08;2!CL:0002319;7.98e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.39e-12,3;CL:0000128,3.44e-09,7;CL:0000126,3.44e-09,7;CL:0000127,3.44e-09,7;CL:0002453,3.44e-09,7;CL:0002319,8.41e-08,25;CL:0000047,1.43e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.76e-19;82!UBERON:0006241;6.70e-14;3!UBERON:0003057;6.70e-14;3!UBERON:0010122;4.04e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.80e-122!57;UBERON:0005068!2.80e-122!57;UBERON:0006241!2.80e-122!57;UBERON:0007135!2.80e-122!57;UBERON:0001017!2.12e-115!82;UBERON:0005743!1.51e-109!86;UBERON:0002616!3.47e-102!59;UBERON:0000073!3.84e-102!94;UBERON:0001016!3.84e-102!94;UBERON:0000955!8.15e-97!69;UBERON:0006238!8.15e-97!69;UBERON:0002780!4.72e-95!41;UBERON:0001890!4.72e-95!41;UBERON:0006240!4.72e-95!41;UBERON:0003080!1.33e-92!42;UBERON:0002020!1.99e-86!34;UBERON:0003528!1.99e-86!34;UBERON:0001893!9.66e-86!34;UBERON:0003075!3.32e-84!86;UBERON:0007284!3.32e-84!86;UBERON:0002791!3.48e-83!33;UBERON:0002346!6.07e-80!90;UBERON:0001869!1.07e-79!32;UBERON:0003056!1.89e-64!61;UBERON:0000956!1.86e-60!25;UBERON:0000203!1.86e-60!25;UBERON:0007023!1.45e-55!115;UBERON:0000033!2.65e-54!123;UBERON:0004121!1.10e-53!169;UBERON:0000153!2.06e-53!129;UBERON:0007811!2.06e-53!129;UBERON:0000924!3.73e-52!173;UBERON:0006601!3.73e-52!173;UBERON:0002619!5.12e-52!22;UBERON:0001950!2.77e-46!20;UBERON:0000025!2.18e-30!194;UBERON:0003076!7.17e-29!15;UBERON:0003057!7.17e-29!15;UBERON:0002308!6.83e-27!9;UBERON:0000125!6.83e-27!9;UBERON:0002420!3.40e-26!9;UBERON:0007245!3.40e-26!9;UBERON:0010009!3.40e-26!9;UBERON:0010011!3.40e-26!9;UBERON:0000454!3.40e-26!9;UBERON:0004732!4.89e-23!13;UBERON:0004111!4.97e-22!241;UBERON:0009663!8.57e-21!7;UBERON:0004733!3.72e-20!12;UBERON:0002028!3.72e-20!12;UBERON:0007277!3.72e-20!12;UBERON:0002298!1.26e-19!8;UBERON:0000477!1.39e-18!286;UBERON:0001871!1.88e-17!7;UBERON:0000200!2.17e-17!6;UBERON:0000483!3.07e-16!309;UBERON:0000119!5.83e-16!312;UBERON:0000349!3.24e-15!5;UBERON:0000475!5.70e-15!365;UBERON:0002021!6.25e-15!5;UBERON:0000064!7.58e-15!219;UBERON:0000369!3.58e-12!4;UBERON:0002435!3.58e-12!4;UBERON:0000204!3.58e-12!4;UBERON:0010082!3.58e-12!4;UBERON:0002680!5.68e-12!9;UBERON:0001895!5.68e-12!9;UBERON:0010092!5.68e-12!9;UBERON:0002240!4.79e-11!3;UBERON:0001894!4.91e-11!7;UBERON:0006222!4.91e-11!7;UBERON:0001896!6.41e-11!3;UBERON:0005290!6.41e-11!3;UBERON:0010096!6.41e-11!3;UBERON:0006331!1.04e-10!3;UBERON:0000988!1.56e-10!3;UBERON:0001872!7.21e-10!5;UBERON:0002771!8.79e-10!3;UBERON:0005383!8.79e-10!3;UBERON:0005382!8.79e-10!3;UBERON:0002148!8.13e-08!2;UBERON:0009662!8.13e-08!2;UBERON:0005162!8.68e-08!2;UBERON:0000122!8.68e-08!2;UBERON:0001897!1.09e-07!2;UBERON:0001875!1.87e-07!2;UBERON:0006514!1.87e-07!2;UBERON:0001954!2.05e-07!2;UBERON:0003022!2.05e-07!2;UBERON:0002421!2.05e-07!2;UBERON:0002600!2.05e-07!2;UBERON:0001873!2.25e-07!2;UBERON:0010122!2.25e-07!2;UBERON:0001876!4.32e-07!2;UBERON:0000923!7.91e-07!604;UBERON:0005291!7.91e-07!604;UBERON:0006598!7.91e-07!604;UBERON:0002532!7.91e-07!604;UBERON:0002050!8.57e-07!605;UBERON:0005423!8.57e-07!605;UBERON:0005174!9.58e-07!5;UBERON:0001137!9.58e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!2.80e-122!57;UBERON:0005068!2.80e-122!57;UBERON:0006241!2.80e-122!57;UBERON:0007135!2.80e-122!57;UBERON:0001017!2.12e-115!82;UBERON:0005743!1.51e-109!86;UBERON:0002616!3.47e-102!59;UBERON:0000073!3.84e-102!94;UBERON:0001016!3.84e-102!94;UBERON:0000955!8.15e-97!69;UBERON:0006238!8.15e-97!69;UBERON:0002780!4.72e-95!41;UBERON:0001890!4.72e-95!41;UBERON:0006240!4.72e-95!41;UBERON:0003080!1.33e-92!42;UBERON:0002020!1.99e-86!34;UBERON:0003528!1.99e-86!34;UBERON:0001893!9.66e-86!34;UBERON:0003075!3.32e-84!86;UBERON:0007284!3.32e-84!86;UBERON:0002791!3.48e-83!33;UBERON:0002346!6.07e-80!90;UBERON:0001869!1.07e-79!32;UBERON:0003056!1.89e-64!61;UBERON:0000956!1.86e-60!25;UBERON:0000203!1.86e-60!25;UBERON:0007023!1.45e-55!115;UBERON:0000033!2.65e-54!123;UBERON:0004121!1.10e-53!169;UBERON:0000153!2.06e-53!129;UBERON:0007811!2.06e-53!129;UBERON:0000924!3.73e-52!173;UBERON:0006601!3.73e-52!173;UBERON:0002619!5.12e-52!22;UBERON:0001950!2.77e-46!20;UBERON:0000025!2.18e-30!194;UBERON:0003076!7.17e-29!15;UBERON:0003057!7.17e-29!15;UBERON:0002308!6.83e-27!9;UBERON:0000125!6.83e-27!9;UBERON:0002420!3.40e-26!9;UBERON:0007245!3.40e-26!9;UBERON:0010009!3.40e-26!9;UBERON:0010011!3.40e-26!9;UBERON:0000454!3.40e-26!9;UBERON:0004732!4.89e-23!13;UBERON:0004111!4.97e-22!241;UBERON:0009663!8.57e-21!7;UBERON:0004733!3.72e-20!12;UBERON:0002028!3.72e-20!12;UBERON:0007277!3.72e-20!12;UBERON:0002298!1.26e-19!8;UBERON:0000477!1.39e-18!286;UBERON:0001871!1.88e-17!7;UBERON:0000200!2.17e-17!6;UBERON:0000483!3.07e-16!309;UBERON:0000119!5.83e-16!312;UBERON:0000349!3.24e-15!5;UBERON:0000475!5.70e-15!365;UBERON:0002021!6.25e-15!5;UBERON:0000064!7.58e-15!219;UBERON:0000369!3.58e-12!4;UBERON:0002435!3.58e-12!4;UBERON:0000204!3.58e-12!4;UBERON:0010082!3.58e-12!4;UBERON:0002680!5.68e-12!9;UBERON:0001895!5.68e-12!9;UBERON:0010092!5.68e-12!9;UBERON:0002240!4.79e-11!3;UBERON:0001894!4.91e-11!7;UBERON:0006222!4.91e-11!7;UBERON:0001896!6.41e-11!3;UBERON:0005290!6.41e-11!3;UBERON:0010096!6.41e-11!3;UBERON:0006331!1.04e-10!3;UBERON:0000988!1.56e-10!3;UBERON:0001872!7.21e-10!5;UBERON:0002771!8.79e-10!3;UBERON:0005383!8.79e-10!3;UBERON:0005382!8.79e-10!3;UBERON:0002148!8.13e-08!2;UBERON:0009662!8.13e-08!2;UBERON:0005162!8.68e-08!2;UBERON:0000122!8.68e-08!2;UBERON:0001897!1.09e-07!2;UBERON:0001875!1.87e-07!2;UBERON:0006514!1.87e-07!2;UBERON:0001954!2.05e-07!2;UBERON:0003022!2.05e-07!2;UBERON:0002421!2.05e-07!2;UBERON:0002600!2.05e-07!2;UBERON:0001873!2.25e-07!2;UBERON:0010122!2.25e-07!2;UBERON:0001876!4.32e-07!2;UBERON:0000923!7.91e-07!604;UBERON:0005291!7.91e-07!604;UBERON:0006598!7.91e-07!604;UBERON:0002532!7.91e-07!604;UBERON:0002050!8.57e-07!605;UBERON:0005423!8.57e-07!605;UBERON:0005174!9.58e-07!5;UBERON:0001137!9.58e-07!5 | ||
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|short_description=p10@GFAP | |short_description=p10@GFAP | ||
}} | }} |
Latest revision as of 23:30, 24 September 2015
Short description: | p10@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 42bp_to_BC012228_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.39e-12 | 3 |
oligodendrocyte | 3.44e-09 | 7 |
macroglial cell | 3.44e-09 | 7 |
astrocyte | 3.44e-09 | 7 |
oligodendrocyte precursor cell | 3.44e-09 | 7 |
neural cell | 8.41e-08 | 25 |
neuronal stem cell | 1.43e-07 | 8 |