FFCP PHASE1:Hg19::chr18:47376159..47376168,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:47376159..47376168,-
|short_description=p7@MYO5B
|description=CAGE_peak_7_at_MYO5B_5end
|association_with_transcript=47bp_to_uc002ldz.2_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4645 | |EntrezGene=4645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7603 | |HGNC=7603 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=47bp_to_uc002ldz.2_5end | |||
|cluster_id=chr18:47376159..47376168,- | |||
|coexpression_cluster_id=C2462 | |||
|description=CAGE_peak_7_at_MYO5B_5end | |||
|id=chr18:47376159..47376168,- | |||
|ontology_enrichment_celltype=CL:0000066!1.43e-43!254;CL:0000082!1.36e-12!19;CL:0002076!1.37e-11!43;CL:0000223!8.00e-11!59;CL:0000076!4.99e-10!62 | |||
|ontology_enrichment_celltype_v019=CL:0000239;2.06e-10;3!CL:1000615;2.06e-10;3!CL:0002166;2.06e-10;3!CL:0002306;2.06e-10;3!CL:1000497;2.23e-10;17!CL:0002518;2.23e-10;17!CL:0002327;5.04e-08;4!CL:1000449;7.70e-08;15!CL:1000507;5.04e-07;10!CL:1000494;5.04e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.02e-11,253;CL:0002166,1.00e-10,3;CL:1000497,2.63e-10,17;CL:0002518,2.63e-10,17;CL:0000239,4.19e-10,3;CL:1000615,4.19e-10,3;CL:0002306,4.19e-10,3;CL:0002327,5.62e-08,4;CL:1000449,9.77e-08,15;CL:1000507,7.03e-07,10;CL:1000494,7.03e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.07e-31!106;DOID:0050687!2.08e-26!143;DOID:162!4.49e-18!235;DOID:14566!3.52e-17!239;DOID:0050615!3.14e-09!16;DOID:1749!3.54e-09!14;DOID:1324!1.38e-08!15;DOID:3908!5.80e-07!5;DOID:3905!6.50e-07!9 | |||
|ontology_enrichment_disease_v019=DOID:3111;6.99e-09;1!DOID:3603;6.99e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.82e-09,106;DOID:3111,7.01e-09,1;DOID:3603,7.01e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0008947!1.23e-20!38;UBERON:0003258!1.23e-20!38;UBERON:0004119!1.17e-19!169;UBERON:0000925!1.17e-19!169;UBERON:0006595!1.17e-19!169;UBERON:0001007!2.73e-18!155;UBERON:0001555!2.73e-18!155;UBERON:0007026!2.73e-18!155;UBERON:0000065!9.61e-17!53;UBERON:0001004!5.42e-16!72;UBERON:0004921!7.20e-16!129;UBERON:0004185!7.20e-16!129;UBERON:0000072!1.07e-15!46;UBERON:0005153!6.19e-15!37;UBERON:0005911!2.04e-14!82;UBERON:0000077!1.76e-13!130;UBERON:0002048!5.46e-13!22;UBERON:0000117!5.46e-13!22;UBERON:0000171!5.46e-13!22;UBERON:0000170!5.46e-13!22;UBERON:0005597!5.46e-13!22;UBERON:0000118!5.46e-13!22;UBERON:0004802!1.36e-12!19;UBERON:0000115!1.36e-12!19;UBERON:0001041!2.37e-12!98;UBERON:0001737!9.06e-11!9;UBERON:0004807!1.13e-10!28;UBERON:0005157!9.75e-10!51;UBERON:0005178!1.03e-09!34;UBERON:0002224!1.03e-09!34;UBERON:0005181!2.84e-09!35;UBERON:0002294!3.13e-09!7;UBERON:0001173!3.13e-09!7;UBERON:0004912!3.13e-09!7;UBERON:0000063!2.38e-08!97;UBERON:0003104!3.77e-08!238;UBERON:0009142!3.77e-08!238;UBERON:0000466!1.11e-07!126;UBERON:0000464!1.43e-07!104;UBERON:0005177!2.89e-07!107;UBERON:0001048!8.18e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;2.06e-10;3!UBERON:0007685;2.06e-10;3!UBERON:0004134;2.06e-10;3!UBERON:0002113;3.13e-10;24!UBERON:0011143;3.13e-10;24!UBERON:0004913;1.97e-08;1!UBERON:0003703;1.97e-08;1!UBERON:0001174;1.97e-08;1!UBERON:0004914;1.97e-08;1!UBERON:0000489;2.23e-08;29!UBERON:0006554;4.41e-08;30!UBERON:0001008;4.41e-08;30!UBERON:0001911;5.04e-08;4!UBERON:0002394;5.04e-08;4!UBERON:0001708;5.04e-08;4!UBERON:0003928;5.04e-08;4!UBERON:0008895;5.04e-08;4!UBERON:0006555;7.70e-08;15!UBERON:0004819;7.70e-08;15!UBERON:0001285;7.70e-08;15!UBERON:0007684;7.70e-08;15!UBERON:0004211;5.04e-07;10!UBERON:0009773;5.04e-07;10!UBERON:0001231;5.04e-07;10!UBERON:0004810;5.04e-07;10!UBERON:0000058;6.46e-07;10!UBERON:0002108;8.64e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,4.19e-10,3;UBERON:0007685,4.19e-10,3;UBERON:0004134,4.19e-10,3;UBERON:0002113,2.69e-09,26;UBERON:0003918,2.69e-09,26;UBERON:0011143,2.69e-09,26;UBERON:0005095,2.69e-09,26;UBERON:0007687,2.69e-09,26;UBERON:0004913,1.10e-08,1;UBERON:0003703,1.10e-08,1;UBERON:0001174,1.10e-08,1;UBERON:0004914,1.10e-08,1;UBERON:0001708,2.96e-08,4;UBERON:0008895,2.96e-08,4;UBERON:0001911,5.62e-08,4;UBERON:0005333,5.62e-08,4;UBERON:0008425,5.62e-08,4;UBERON:0005311,5.62e-08,4;UBERON:0004211,9.77e-08,15;UBERON:0009773,9.77e-08,15;UBERON:0001231,9.77e-08,15;UBERON:0001285,9.77e-08,15;UBERON:0007684,9.77e-08,15;UBERON:0004208,9.77e-08,15;UBERON:0000489,1.03e-07,31;UBERON:0006555,2.93e-07,16;UBERON:0004819,2.93e-07,16;UBERON:0002108,6.87e-07,4;UBERON:0004810,7.03e-07,10;UBERON:0011159,9.16e-07,5 | |||
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| ||
|short_description=p7@MYO5B | |||
}} | }} |
Latest revision as of 18:03, 19 September 2015
Short description: | p7@MYO5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MYO5B_5end |
Coexpression cluster: | C2462_cervical_small_colon_clear_embryonic_renal_mucinous |
Association with transcript: | 47bp_to_uc002ldz.2_5end |
EntrezGene: | MYO5B |
HGNC: | 7603 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.02e-11 | 253 |
epithelial cell of Malassez | 1.00e-10 | 3 |
kidney cell | 2.63e-10 | 17 |
kidney epithelial cell | 2.63e-10 | 17 |
brush border epithelial cell | 4.19e-10 | 3 |
kidney cortex tubule cell | 4.19e-10 | 3 |
epithelial cell of proximal tubule | 4.19e-10 | 3 |
mammary gland epithelial cell | 5.62e-08 | 4 |
epithelial cell of nephron | 9.77e-08 | 15 |
kidney tubule cell | 7.03e-07 | 10 |
nephron tubule epithelial cell | 7.03e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 4.19e-10 | 3 |
region of nephron tubule | 4.19e-10 | 3 |
proximal tubule | 4.19e-10 | 3 |
kidney | 2.69e-09 | 26 |
kidney mesenchyme | 2.69e-09 | 26 |
upper urinary tract | 2.69e-09 | 26 |
kidney rudiment | 2.69e-09 | 26 |
kidney field | 2.69e-09 | 26 |
hepatopancreatic ampulla | 1.10e-08 | 1 |
extrahepatic bile duct | 1.10e-08 | 1 |
common bile duct | 1.10e-08 | 1 |
duodenal papilla | 1.10e-08 | 1 |
jaw skeleton | 2.96e-08 | 4 |
splanchnocranium | 2.96e-08 | 4 |
mammary gland | 5.62e-08 | 4 |
mammary bud | 5.62e-08 | 4 |
mammary ridge | 5.62e-08 | 4 |
mammary placode | 5.62e-08 | 4 |
nephron epithelium | 9.77e-08 | 15 |
renal tubule | 9.77e-08 | 15 |
nephron tubule | 9.77e-08 | 15 |
nephron | 9.77e-08 | 15 |
uriniferous tubule | 9.77e-08 | 15 |
nephrogenic mesenchyme | 9.77e-08 | 15 |
cavitated compound organ | 1.03e-07 | 31 |
excretory tube | 2.93e-07 | 16 |
kidney epithelium | 2.93e-07 | 16 |
small intestine | 6.87e-07 | 4 |
nephron tubule epithelium | 7.03e-07 | 10 |
primary subdivision of cranial skeletal system | 9.16e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.82e-09 | 106 |
cystadenocarcinoma | 7.01e-09 | 1 |
mucinous cystadenocarcinoma | 7.01e-09 | 1 |