FFCP PHASE1:Hg19::chr16:75285508..75285580,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9564 | |EntrezGene=9564 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=971 | |HGNC=971 | ||
|TSSclassifier=strong | |||
|UniProt=F8WA69,P56945,Q6QEF7,B2RBL9,B4DIW5 | |UniProt=F8WA69,P56945,Q6QEF7,B2RBL9,B4DIW5 | ||
|association_with_transcript=0bp_to_ENST00000393420,NM_001170717,NM_014567_5end | |association_with_transcript=0bp_to_ENST00000393420,NM_001170717,NM_014567_5end | ||
|cluster_id=chr16:75285508..75285580,- | |||
|coexpression_cluster_id=C2390 | |coexpression_cluster_id=C2390 | ||
|description=CAGE_peak_1_at_BCAR1_5end | |description=CAGE_peak_1_at_BCAR1_5end | ||
|id=chr16:75285508..75285580,- | |id=chr16:75285508..75285580,- | ||
|ontology_enrichment_celltype=CL:0000066!1.53e-26!254;CL:0000220!3.61e-26!246;CL:0002321!5.65e-26!248;CL:0000222!5.43e-19!119;CL:0000213!3.07e-18!57;CL:0000215!3.07e-18!57;CL:0000076!7.03e-18!62;CL:0000115!2.63e-16!35;CL:0002139!6.19e-16!24;CL:0002078!1.33e-15!44;CL:0000071!1.10e-12!18;CL:0002546!1.10e-12!18;CL:0000055!1.04e-07!180;CL:1000449!1.51e-07!16;CL:1000413!4.62e-07!9 | |ontology_enrichment_celltype=CL:0000066!1.53e-26!254;CL:0000220!3.61e-26!246;CL:0002321!5.65e-26!248;CL:0000222!5.43e-19!119;CL:0000213!3.07e-18!57;CL:0000215!3.07e-18!57;CL:0000076!7.03e-18!62;CL:0000115!2.63e-16!35;CL:0002139!6.19e-16!24;CL:0002078!1.33e-15!44;CL:0000071!1.10e-12!18;CL:0002546!1.10e-12!18;CL:0000055!1.04e-07!180;CL:1000449!1.51e-07!16;CL:1000413!4.62e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.65e-16;24!CL:0000115;3.23e-14;36!CL:0000071;1.05e-12;18!CL:0000213;9.11e-12;58!CL:0000215;9.11e-12;58!CL:0002078;2.25e-10;45!CL:0000076;2.89e-09;63!CL:1000449;4.08e-08;15!CL:0002681;4.02e-07;12!CL:0002584;4.02e-07;12!CL:1000413;4.49e-07;9!CL:1000497;7.20e-07;17!CL:0002518;7.20e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.68e-27,253;CL:0002321,1.96e-26,250;CL:0000222,2.25e-19,121;CL:0000213,6.48e-19,58;CL:0000215,6.48e-19,58;CL:0000076,1.92e-17,63;CL:0000115,5.12e-17,36;CL:0002078,2.81e-16,45;CL:0002139,5.87e-16,24;CL:0000071,1.05e-12,18;CL:0002546,1.05e-12,18;CL:1000449,4.60e-08,15;CL:0002681,4.38e-07,12;CL:0002584,4.38e-07,12;CL:1000413,4.53e-07,9;CL:1000497,7.91e-07,17;CL:0002518,7.91e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;1.05e-12;18!CL:0000222;2.85e-07;121 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.68e-23!312;UBERON:0000475!1.53e-22!365;UBERON:0000483!2.11e-22!309;UBERON:0004111!1.81e-18!241;UBERON:0002049!7.00e-18!79;UBERON:0007798!7.00e-18!79;UBERON:0000477!3.45e-17!286;UBERON:0003914!5.94e-17!118;UBERON:0000481!1.95e-16!347;UBERON:0000468!5.03e-16!659;UBERON:0000025!5.12e-15!194;UBERON:0000467!6.42e-15!625;UBERON:0000480!1.13e-14!626;UBERON:0000055!5.10e-14!69;UBERON:0002100!8.90e-13!216;UBERON:0001986!1.10e-12!18;UBERON:0004638!1.10e-12!18;UBERON:0004852!1.10e-12!18;UBERON:0000487!3.11e-12!22;UBERON:0000490!1.29e-11!138;UBERON:0003104!4.08e-11!238;UBERON:0009142!4.08e-11!238;UBERON:0001981!6.06e-11!60;UBERON:0007500!6.06e-11!60;UBERON:0004537!6.06e-11!60;UBERON:0006965!6.06e-11!60;UBERON:0004872!7.52e-11!84;UBERON:0005256!1.71e-10!143;UBERON:0000064!2.85e-10!219;UBERON:0006914!1.04e-09!25;UBERON:0002050!2.47e-09!605;UBERON:0005423!2.47e-09!605;UBERON:0001009!2.67e-09!113;UBERON:0000923!2.67e-09!604;UBERON:0005291!2.67e-09!604;UBERON:0006598!2.67e-09!604;UBERON:0002532!2.67e-09!604;UBERON:0004535!4.17e-09!110;UBERON:0000922!5.22e-09!612;UBERON:0000466!5.31e-09!126;UBERON:0001048!8.00e-09!168;UBERON:0005177!2.19e-08!107;UBERON:0004121!2.52e-08!169;UBERON:0000353!5.42e-08!17;UBERON:0005085!1.49e-07!29;UBERON:0004211!1.51e-07!16;UBERON:0001285!1.51e-07!16;UBERON:0007684!1.51e-07!16;UBERON:0003220!1.51e-07!16;UBERON:0004208!1.51e-07!16;UBERON:0000924!2.02e-07!173;UBERON:0006601!2.02e-07!173;UBERON:0006555!2.34e-07!17;UBERON:0005103!2.34e-07!17;UBERON:0000083!2.34e-07!17;UBERON:0009201!2.34e-07!17;UBERON:0004819!2.34e-07!17;UBERON:0006553!2.34e-07!17;UBERON:0003074!2.34e-07!17;UBERON:0003060!2.34e-07!17;UBERON:0009569!4.10e-07!113;UBERON:0003915!4.62e-07!9;UBERON:0004700!4.62e-07!9;UBERON:0001917!4.62e-07!9;UBERON:0000080!5.86e-07!18;UBERON:0002120!5.86e-07!18;UBERON:0004875!5.86e-07!18;UBERON:0005721!5.86e-07!18;UBERON:0005754!5.86e-07!18;UBERON:0007297!5.86e-07!18;UBERON:0000464!6.20e-07!104;UBERON:0004119!6.76e-07!169;UBERON:0000925!6.76e-07!169;UBERON:0006595!6.76e-07!169 | |ontology_enrichment_uberon=UBERON:0000119!1.68e-23!312;UBERON:0000475!1.53e-22!365;UBERON:0000483!2.11e-22!309;UBERON:0004111!1.81e-18!241;UBERON:0002049!7.00e-18!79;UBERON:0007798!7.00e-18!79;UBERON:0000477!3.45e-17!286;UBERON:0003914!5.94e-17!118;UBERON:0000481!1.95e-16!347;UBERON:0000468!5.03e-16!659;UBERON:0000025!5.12e-15!194;UBERON:0000467!6.42e-15!625;UBERON:0000480!1.13e-14!626;UBERON:0000055!5.10e-14!69;UBERON:0002100!8.90e-13!216;UBERON:0001986!1.10e-12!18;UBERON:0004638!1.10e-12!18;UBERON:0004852!1.10e-12!18;UBERON:0000487!3.11e-12!22;UBERON:0000490!1.29e-11!138;UBERON:0003104!4.08e-11!238;UBERON:0009142!4.08e-11!238;UBERON:0001981!6.06e-11!60;UBERON:0007500!6.06e-11!60;UBERON:0004537!6.06e-11!60;UBERON:0006965!6.06e-11!60;UBERON:0004872!7.52e-11!84;UBERON:0005256!1.71e-10!143;UBERON:0000064!2.85e-10!219;UBERON:0006914!1.04e-09!25;UBERON:0002050!2.47e-09!605;UBERON:0005423!2.47e-09!605;UBERON:0001009!2.67e-09!113;UBERON:0000923!2.67e-09!604;UBERON:0005291!2.67e-09!604;UBERON:0006598!2.67e-09!604;UBERON:0002532!2.67e-09!604;UBERON:0004535!4.17e-09!110;UBERON:0000922!5.22e-09!612;UBERON:0000466!5.31e-09!126;UBERON:0001048!8.00e-09!168;UBERON:0005177!2.19e-08!107;UBERON:0004121!2.52e-08!169;UBERON:0000353!5.42e-08!17;UBERON:0005085!1.49e-07!29;UBERON:0004211!1.51e-07!16;UBERON:0001285!1.51e-07!16;UBERON:0007684!1.51e-07!16;UBERON:0003220!1.51e-07!16;UBERON:0004208!1.51e-07!16;UBERON:0000924!2.02e-07!173;UBERON:0006601!2.02e-07!173;UBERON:0006555!2.34e-07!17;UBERON:0005103!2.34e-07!17;UBERON:0000083!2.34e-07!17;UBERON:0009201!2.34e-07!17;UBERON:0004819!2.34e-07!17;UBERON:0006553!2.34e-07!17;UBERON:0003074!2.34e-07!17;UBERON:0003060!2.34e-07!17;UBERON:0009569!4.10e-07!113;UBERON:0003915!4.62e-07!9;UBERON:0004700!4.62e-07!9;UBERON:0001917!4.62e-07!9;UBERON:0000080!5.86e-07!18;UBERON:0002120!5.86e-07!18;UBERON:0004875!5.86e-07!18;UBERON:0005721!5.86e-07!18;UBERON:0005754!5.86e-07!18;UBERON:0007297!5.86e-07!18;UBERON:0000464!6.20e-07!104;UBERON:0004119!6.76e-07!169;UBERON:0000925!6.76e-07!169;UBERON:0006595!6.76e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.05e-12;18!UBERON:0001986;1.05e-12;18!UBERON:0004852;1.05e-12;18!UBERON:0000487;2.76e-12;22!UBERON:0000490;2.93e-11;33!UBERON:0006914;1.02e-09;25!UBERON:0003914;9.61e-09;74!UBERON:0002049;3.26e-08;75!UBERON:0007798;3.26e-08;75!UBERON:0006555;4.08e-08;15!UBERON:0004819;4.08e-08;15!UBERON:0001285;4.08e-08;15!UBERON:0007684;4.08e-08;15!UBERON:0000353;4.41e-08;15!UBERON:0000055;1.47e-07;65!UBERON:0001225;4.02e-07;12!UBERON:0008987;4.02e-07;12!UBERON:0003915;4.49e-07;9!UBERON:0004700;4.49e-07;9!UBERON:0001917;4.49e-07;9!UBERON:0001851;8.66e-07;15!UBERON:0006554;8.77e-07;30!UBERON:0001008;8.77e-07;30 | |||
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| ||
|short_description=p1@BCAR1 | |short_description=p1@BCAR1 | ||
}} | }} |
Latest revision as of 21:24, 17 September 2015
Short description: | p1@BCAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BCAR1_5end |
Coexpression cluster: | C2390_Renal_Endothelial_Alveolar_Hepatic_Mesenchymal_Sebocyte_mesothelioma |
Association with transcript: | 0bp_to_ENST00000393420, NM_001170717, NM_014567_5end |
EntrezGene: | BCAR1 |
HGNC: | 971 |
UniProt: | F8WA69P56945Q6QEF7B2RBL9B4DIW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.68e-27 | 253 |
embryonic cell | 1.96e-26 | 250 |
mesodermal cell | 2.25e-19 | 121 |
lining cell | 6.48e-19 | 58 |
barrier cell | 6.48e-19 | 58 |
squamous epithelial cell | 1.92e-17 | 63 |
endothelial cell | 5.12e-17 | 36 |
meso-epithelial cell | 2.81e-16 | 45 |
endothelial cell of vascular tree | 5.87e-16 | 24 |
blood vessel endothelial cell | 1.05e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.05e-12 | 18 |
epithelial cell of nephron | 4.60e-08 | 15 |
kidney cortical cell | 4.38e-07 | 12 |
renal cortical epithelial cell | 4.38e-07 | 12 |
endothelial cell of artery | 4.53e-07 | 9 |
kidney cell | 7.91e-07 | 17 |
kidney epithelial cell | 7.91e-07 | 17 |