FFCP PHASE1:Hg19::chr11:61717816..61717838,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7439 | |EntrezGene=7439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12703 | |HGNC=12703 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z375 | |UniProt=B7Z375 | ||
|association_with_transcript=0bp_to_ENST00000435278,ENST00000524877,ENST00000524926,ENST00000529265,ENST00000533521_5end | |association_with_transcript=0bp_to_ENST00000435278,ENST00000524877,ENST00000524926,ENST00000529265,ENST00000533521_5end | ||
|cluster_id=chr11:61717816..61717838,+ | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_1_at_BEST1_5end | |description=CAGE_peak_1_at_BEST1_5end | ||
|id=chr11:61717816..61717838,+ | |id=chr11:61717816..61717838,+ | ||
|ontology_enrichment_celltype=CL:0000147!3.04e-15!14;CL:0000148!8.59e-12!10;CL:0000541!8.59e-12!10;CL:0000149!1.90e-08!4;CL:0002567!4.49e-07!3 | |ontology_enrichment_celltype=CL:0000147!3.04e-15!14;CL:0000148!8.59e-12!10;CL:0000541!8.59e-12!10;CL:0000149!1.90e-08!4;CL:0002567!4.49e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000147;1.27e-16;14!CL:0000148;1.98e-14;10!CL:0002567;3.35e-10;3!CL:0000149;8.77e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,1.27e-16,14;CL:0000148,1.94e-14,10;CL:0000541,1.94e-14,10;CL:0002567,3.20e-10,3;CL:0000149,8.87e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.45e-22;82!UBERON:0006241;5.87e-10;3!UBERON:0003057;5.87e-10;3!UBERON:0006215;1.42e-08;3!UBERON:0010122;3.77e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;4.52e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.32e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.00e-76!115;UBERON:0001049!9.26e-60!57;UBERON:0005068!9.26e-60!57;UBERON:0006241!9.26e-60!57;UBERON:0007135!9.26e-60!57;UBERON:0005743!1.97e-52!86;UBERON:0003075!5.61e-51!86;UBERON:0007284!5.61e-51!86;UBERON:0002616!9.07e-49!59;UBERON:0000073!4.20e-48!94;UBERON:0001016!4.20e-48!94;UBERON:0002346!5.71e-48!90;UBERON:0001017!2.79e-46!82;UBERON:0002780!9.76e-45!41;UBERON:0001890!9.76e-45!41;UBERON:0006240!9.76e-45!41;UBERON:0000955!1.96e-43!69;UBERON:0006238!1.96e-43!69;UBERON:0003080!1.99e-43!42;UBERON:0002020!2.72e-39!34;UBERON:0003528!2.72e-39!34;UBERON:0001893!3.02e-39!34;UBERON:0002791!1.31e-37!33;UBERON:0001869!1.36e-35!32;UBERON:0003056!4.68e-35!61;UBERON:0004121!3.09e-29!169;UBERON:0000153!5.58e-29!129;UBERON:0007811!5.58e-29!129;UBERON:0000033!1.53e-28!123;UBERON:0000924!3.89e-28!173;UBERON:0006601!3.89e-28!173;UBERON:0002619!3.19e-25!22;UBERON:0000956!6.26e-24!25;UBERON:0000203!6.26e-24!25;UBERON:0001950!4.61e-22!20;UBERON:0002308!8.74e-18!9;UBERON:0000125!8.74e-18!9;UBERON:0002420!2.78e-17!9;UBERON:0007245!2.78e-17!9;UBERON:0010009!2.78e-17!9;UBERON:0010011!2.78e-17!9;UBERON:0000454!2.78e-17!9;UBERON:0003076!8.30e-17!15;UBERON:0003057!8.30e-17!15;UBERON:0009663!3.59e-14!7;UBERON:0004732!1.41e-13!13;UBERON:0002298!3.27e-12!8;UBERON:0004733!6.43e-12!12;UBERON:0002028!6.43e-12!12;UBERON:0007277!6.43e-12!12;UBERON:0000025!8.09e-12!194;UBERON:0000200!4.83e-11!6;UBERON:0004111!1.21e-10!241;UBERON:0000349!8.32e-10!5;UBERON:0000064!8.70e-10!219;UBERON:0000369!1.35e-08!4;UBERON:0002435!1.35e-08!4;UBERON:0000204!1.35e-08!4;UBERON:0010082!1.35e-08!4;UBERON:0000062!1.51e-08!511;UBERON:0001871!3.76e-08!7;UBERON:0000477!3.93e-08!286;UBERON:0000475!7.23e-08!365;UBERON:0000483!9.73e-08!309;UBERON:0000119!1.60e-07!312;UBERON:0002680!2.78e-07!9;UBERON:0001895!2.78e-07!9;UBERON:0010092!2.78e-07!9;UBERON:0006331!3.69e-07!3;UBERON:0000988!4.67e-07!3;UBERON:0001894!6.38e-07!7;UBERON:0006222!6.38e-07!7;UBERON:0002240!6.62e-07!3;UBERON:0001896!6.88e-07!3;UBERON:0005290!6.88e-07!3;UBERON:0010096!6.88e-07!3;UBERON:0000966!7.21e-07!5;UBERON:0005388!7.21e-07!5;UBERON:0001802!7.21e-07!5;UBERON:0005383!7.57e-07!3;UBERON:0005382!7.57e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!1.00e-76!115;UBERON:0001049!9.26e-60!57;UBERON:0005068!9.26e-60!57;UBERON:0006241!9.26e-60!57;UBERON:0007135!9.26e-60!57;UBERON:0005743!1.97e-52!86;UBERON:0003075!5.61e-51!86;UBERON:0007284!5.61e-51!86;UBERON:0002616!9.07e-49!59;UBERON:0000073!4.20e-48!94;UBERON:0001016!4.20e-48!94;UBERON:0002346!5.71e-48!90;UBERON:0001017!2.79e-46!82;UBERON:0002780!9.76e-45!41;UBERON:0001890!9.76e-45!41;UBERON:0006240!9.76e-45!41;UBERON:0000955!1.96e-43!69;UBERON:0006238!1.96e-43!69;UBERON:0003080!1.99e-43!42;UBERON:0002020!2.72e-39!34;UBERON:0003528!2.72e-39!34;UBERON:0001893!3.02e-39!34;UBERON:0002791!1.31e-37!33;UBERON:0001869!1.36e-35!32;UBERON:0003056!4.68e-35!61;UBERON:0004121!3.09e-29!169;UBERON:0000153!5.58e-29!129;UBERON:0007811!5.58e-29!129;UBERON:0000033!1.53e-28!123;UBERON:0000924!3.89e-28!173;UBERON:0006601!3.89e-28!173;UBERON:0002619!3.19e-25!22;UBERON:0000956!6.26e-24!25;UBERON:0000203!6.26e-24!25;UBERON:0001950!4.61e-22!20;UBERON:0002308!8.74e-18!9;UBERON:0000125!8.74e-18!9;UBERON:0002420!2.78e-17!9;UBERON:0007245!2.78e-17!9;UBERON:0010009!2.78e-17!9;UBERON:0010011!2.78e-17!9;UBERON:0000454!2.78e-17!9;UBERON:0003076!8.30e-17!15;UBERON:0003057!8.30e-17!15;UBERON:0009663!3.59e-14!7;UBERON:0004732!1.41e-13!13;UBERON:0002298!3.27e-12!8;UBERON:0004733!6.43e-12!12;UBERON:0002028!6.43e-12!12;UBERON:0007277!6.43e-12!12;UBERON:0000025!8.09e-12!194;UBERON:0000200!4.83e-11!6;UBERON:0004111!1.21e-10!241;UBERON:0000349!8.32e-10!5;UBERON:0000064!8.70e-10!219;UBERON:0000369!1.35e-08!4;UBERON:0002435!1.35e-08!4;UBERON:0000204!1.35e-08!4;UBERON:0010082!1.35e-08!4;UBERON:0000062!1.51e-08!511;UBERON:0001871!3.76e-08!7;UBERON:0000477!3.93e-08!286;UBERON:0000475!7.23e-08!365;UBERON:0000483!9.73e-08!309;UBERON:0000119!1.60e-07!312;UBERON:0002680!2.78e-07!9;UBERON:0001895!2.78e-07!9;UBERON:0010092!2.78e-07!9;UBERON:0006331!3.69e-07!3;UBERON:0000988!4.67e-07!3;UBERON:0001894!6.38e-07!7;UBERON:0006222!6.38e-07!7;UBERON:0002240!6.62e-07!3;UBERON:0001896!6.88e-07!3;UBERON:0005290!6.88e-07!3;UBERON:0010096!6.88e-07!3;UBERON:0000966!7.21e-07!5;UBERON:0005388!7.21e-07!5;UBERON:0001802!7.21e-07!5;UBERON:0005383!7.57e-07!3;UBERON:0005382!7.57e-07!3 | ||
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|short_description=p1@BEST1 | |short_description=p1@BEST1 | ||
}} | }} |
Latest revision as of 17:38, 18 September 2015
Short description: | p1@BEST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BEST1_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 0bp_to_ENST00000435278, ENST00000524877, ENST00000524926, ENST00000529265, ENST00000533521_5end |
EntrezGene: | BEST1 |
HGNC: | 12703 |
UniProt: | B7Z375 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 1.27e-16 | 14 |
melanocyte | 1.94e-14 | 10 |
melanoblast | 1.94e-14 | 10 |
light melanocyte | 3.20e-10 | 3 |
visual pigment cell | 8.87e-08 | 4 |
Ontology term | p-value | n |
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