FFCP PHASE1:Hg19::chr11:17565951..17565982,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10083 | |EntrezGene=10083 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12597 | |HGNC=12597 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6N9,Q7RTU8 | |UniProt=Q9Y6N9,Q7RTU8 | ||
|association_with_transcript=0bp_to_ENST00000318024,NM_005709,NM_153676,uc001mne.2,uc001mnf.2,uc001mng.2,uc009yhb.2_5end | |association_with_transcript=0bp_to_ENST00000318024,NM_005709,NM_153676,uc001mne.2,uc001mnf.2,uc001mng.2,uc009yhb.2_5end | ||
|cluster_id=chr11:17565951..17565982,- | |||
|coexpression_cluster_id=C579 | |coexpression_cluster_id=C579 | ||
|description=CAGE_peak_2_at_USH1C_5end | |description=CAGE_peak_2_at_USH1C_5end | ||
|id=chr11:17565951..17565982,- | |id=chr11:17565951..17565982,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.17e-11!106;DOID:3119!1.10e-10!14;DOID:0050687!1.54e-08!143 | |ontology_enrichment_disease=DOID:305!7.17e-11!106;DOID:3119!1.10e-10!14;DOID:0050687!1.54e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:3119;3.20e-07;14!DOID:3493;3.76e-07;2!DOID:4929;6.48e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,3.24e-07,14;DOID:3493,4.95e-07,2;DOID:4929,5.42e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.49e-32!115;UBERON:0001049!4.50e-28!57;UBERON:0005068!4.50e-28!57;UBERON:0006241!4.50e-28!57;UBERON:0007135!4.50e-28!57;UBERON:0001017!7.10e-24!82;UBERON:0005743!1.92e-23!86;UBERON:0002616!2.21e-23!59;UBERON:0002780!7.49e-22!41;UBERON:0001890!7.49e-22!41;UBERON:0006240!7.49e-22!41;UBERON:0003080!4.01e-21!42;UBERON:0000955!1.21e-20!69;UBERON:0006238!1.21e-20!69;UBERON:0000073!6.60e-20!94;UBERON:0001016!6.60e-20!94;UBERON:0003075!7.18e-19!86;UBERON:0007284!7.18e-19!86;UBERON:0002346!1.83e-17!90;UBERON:0001893!3.24e-16!34;UBERON:0002020!5.33e-16!34;UBERON:0003528!5.33e-16!34;UBERON:0002791!3.32e-15!33;UBERON:0001869!4.82e-14!32;UBERON:0003056!5.11e-13!61;UBERON:0005409!6.44e-13!35;UBERON:0002619!1.97e-12!22;UBERON:0000956!1.79e-10!25;UBERON:0000203!1.79e-10!25;UBERON:0001950!2.80e-10!20;UBERON:0000025!2.80e-10!194;UBERON:0000160!3.99e-10!27;UBERON:0000033!4.93e-10!123;UBERON:0000481!6.09e-10!347;UBERON:0000153!1.16e-09!129;UBERON:0007811!1.16e-09!129;UBERON:0000062!2.47e-09!511;UBERON:0000059!4.92e-09!11;UBERON:0002298!8.49e-09!8;UBERON:0004907!1.22e-08!5;UBERON:0003076!4.36e-08!15;UBERON:0003057!4.36e-08!15;UBERON:0004121!1.35e-07!169;UBERON:0001894!1.62e-07!7;UBERON:0006222!1.62e-07!7;UBERON:0002308!2.57e-07!9;UBERON:0000125!2.57e-07!9;UBERON:0004111!2.67e-07!241;UBERON:0001052!2.97e-07!4;UBERON:0000924!3.73e-07!173;UBERON:0006601!3.73e-07!173;UBERON:0004733!9.88e-07!12;UBERON:0002028!9.88e-07!12;UBERON:0007277!9.88e-07!12 | |ontology_enrichment_uberon=UBERON:0007023!1.49e-32!115;UBERON:0001049!4.50e-28!57;UBERON:0005068!4.50e-28!57;UBERON:0006241!4.50e-28!57;UBERON:0007135!4.50e-28!57;UBERON:0001017!7.10e-24!82;UBERON:0005743!1.92e-23!86;UBERON:0002616!2.21e-23!59;UBERON:0002780!7.49e-22!41;UBERON:0001890!7.49e-22!41;UBERON:0006240!7.49e-22!41;UBERON:0003080!4.01e-21!42;UBERON:0000955!1.21e-20!69;UBERON:0006238!1.21e-20!69;UBERON:0000073!6.60e-20!94;UBERON:0001016!6.60e-20!94;UBERON:0003075!7.18e-19!86;UBERON:0007284!7.18e-19!86;UBERON:0002346!1.83e-17!90;UBERON:0001893!3.24e-16!34;UBERON:0002020!5.33e-16!34;UBERON:0003528!5.33e-16!34;UBERON:0002791!3.32e-15!33;UBERON:0001869!4.82e-14!32;UBERON:0003056!5.11e-13!61;UBERON:0005409!6.44e-13!35;UBERON:0002619!1.97e-12!22;UBERON:0000956!1.79e-10!25;UBERON:0000203!1.79e-10!25;UBERON:0001950!2.80e-10!20;UBERON:0000025!2.80e-10!194;UBERON:0000160!3.99e-10!27;UBERON:0000033!4.93e-10!123;UBERON:0000481!6.09e-10!347;UBERON:0000153!1.16e-09!129;UBERON:0007811!1.16e-09!129;UBERON:0000062!2.47e-09!511;UBERON:0000059!4.92e-09!11;UBERON:0002298!8.49e-09!8;UBERON:0004907!1.22e-08!5;UBERON:0003076!4.36e-08!15;UBERON:0003057!4.36e-08!15;UBERON:0004121!1.35e-07!169;UBERON:0001894!1.62e-07!7;UBERON:0006222!1.62e-07!7;UBERON:0002308!2.57e-07!9;UBERON:0000125!2.57e-07!9;UBERON:0004111!2.67e-07!241;UBERON:0001052!2.97e-07!4;UBERON:0000924!3.73e-07!173;UBERON:0006601!3.73e-07!173;UBERON:0004733!9.88e-07!12;UBERON:0002028!9.88e-07!12;UBERON:0007277!9.88e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.69e-27;22!UBERON:0000160;3.67e-23;17!UBERON:0004921;8.52e-16;33!UBERON:0000059;1.36e-13;11!UBERON:0002298;9.79e-12;6!UBERON:0000073;1.89e-11;53!UBERON:0002616;1.89e-11;53!UBERON:0004907;1.63e-10;5!UBERON:0002780;1.64e-10;41!UBERON:0001890;1.64e-10;41!UBERON:0002108;2.08e-10;4!UBERON:0001896;4.13e-09;3!UBERON:0005290;4.13e-09;3!UBERON:0001155;8.75e-09;9!UBERON:0011216;5.28e-08;132!UBERON:0001052;5.77e-08;4!UBERON:0001893;1.76e-07;34!UBERON:0001894;9.87e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.00e-24,25;UBERON:0000160,2.94e-23,17;UBERON:0001049,3.06e-20,56;UBERON:0005068,3.06e-20,56;UBERON:0006241,3.06e-20,56;UBERON:0007135,3.06e-20,56;UBERON:0011216,1.84e-19,223;UBERON:0007023,5.41e-19,114;UBERON:0000073,9.15e-18,53;UBERON:0002616,9.15e-18,53;UBERON:0001017,2.90e-16,81;UBERON:0000955,1.94e-15,68;UBERON:0006238,1.94e-15,68;UBERON:0001016,4.89e-14,89;UBERON:0000059,1.26e-13,11;UBERON:0002780,1.65e-13,41;UBERON:0001890,1.65e-13,41;UBERON:0003080,1.65e-13,41;UBERON:0006240,1.65e-13,41;UBERON:0003075,2.37e-13,82;UBERON:0007284,2.37e-13,82;UBERON:0002346,1.81e-12,86;UBERON:0002298,1.46e-11,6;UBERON:0004907,1.47e-10,5;UBERON:0002108,1.78e-10,4;UBERON:0010371,2.35e-09,104;UBERON:0003056,4.13e-09,61;UBERON:0001893,4.42e-09,34;UBERON:0001896,6.10e-09,3;UBERON:0005290,6.10e-09,3;UBERON:0010096,6.10e-09,3;UBERON:0001155,8.36e-09,9;UBERON:0003076,3.49e-08,15;UBERON:0003057,3.49e-08,15;UBERON:0001052,5.65e-08,4;UBERON:0010314,8.59e-08,132;UBERON:0003528,1.77e-07,34;UBERON:0002020,1.77e-07,34;UBERON:0000025,3.60e-07,192;UBERON:0004921,4.68e-07,118;UBERON:0001894,7.09e-07,7;UBERON:0006222,7.09e-07,7;UBERON:0001897,7.10e-07,2;UBERON:0010225,7.10e-07,2;UBERON:0000007,8.48e-07,2 | |||
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|short_description=p2@USH1C | |short_description=p2@USH1C | ||
}} | }} |
Latest revision as of 00:31, 17 September 2015
Short description: | p2@USH1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_USH1C_5end |
Coexpression cluster: | C579_small_argyrophil_colon_duodenum_signet_temporal_Intestinal |
Association with transcript: | 0bp_to_ENST00000318024, NM_005709, NM_153676, uc001mne.2, uc001mnf.2, uc001mng.2, uc009yhb.2_5end |
EntrezGene: | USH1C |
HGNC: | 12597 |
UniProt: | Q9Y6N9Q7RTU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.24e-07 | 14 |
signet ring cell adenocarcinoma | 4.95e-07 | 2 |
tubular adenocarcinoma | 5.42e-07 | 2 |