FFCP PHASE1:Hg19::chr17:76870222..76870242,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:76870222..76870242,-
|short_description=p15@TIMP2
|description=CAGE_peak_15_at_TIMP2_5end
|association_with_transcript=-4bp_to_ENST00000483343_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7077 | |EntrezGene=7077 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11821 | |HGNC=11821 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000483343_5end | |||
|cluster_id=chr17:76870222..76870242,- | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_15_at_TIMP2_5end | |||
|id=chr17:76870222..76870242,- | |||
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|ontology_enrichment_celltype_v019=CL:0000148;3.06e-15;10!CL:0000147;1.07e-10;14!CL:0000710;2.74e-07;20!CL:0002567;4.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.34e-15,10;CL:0000541,3.34e-15,10;CL:0000147,1.14e-10,14;CL:0000710,2.86e-07,20;CL:0002567,4.73e-07,3 | |||
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|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.19e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.22e-09,2 | |||
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| ||
|short_description=p15@TIMP2 | |||
}} | }} |
Latest revision as of 23:25, 17 September 2015
Short description: | p15@TIMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_TIMP2_5end |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | -4bp_to_ENST00000483343_5end |
EntrezGene: | TIMP2 |
HGNC: | 11821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.34e-15 | 10 |
melanoblast | 3.34e-15 | 10 |
pigment cell | 1.14e-10 | 14 |
neurecto-epithelial cell | 2.86e-07 | 20 |
light melanocyte | 4.73e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.22e-09 | 2 |