FFCP PHASE1:Hg19::chr10:123847193..123847204,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:123847193..123847204,+ | |||
|coexpression_cluster_id=C2041 | |coexpression_cluster_id=C2041 | ||
|description=CAGE_peak_at_chr10:123847193..123847204,+ | |description=CAGE_peak_at_chr10:123847193..123847204,+ | ||
|id=chr10:123847193..123847204,+ | |id=chr10:123847193..123847204,+ | ||
|ontology_enrichment_celltype=CL:0002159!2.02e-11!13;CL:0001014!8.25e-10!2;CL:0001016!8.25e-10!2;CL:0000362!4.82e-09!8;CL:0000622!9.24e-09!5;CL:0000312!1.89e-08!5;CL:0002076!5.74e-08!43;CL:0002368!9.84e-08!13;CL:0000154!2.32e-07!6;CL:0002077!3.90e-07!33;CL:0000240!4.18e-07!6;CL:0000311!4.18e-07!6;CL:0000079!4.18e-07!6;CL:0000237!4.18e-07!6;CL:0000036!4.18e-07!6;CL:0000357!4.18e-07!6;CL:0000114!4.18e-07!6;CL:0002623!5.64e-07!3 | |ontology_enrichment_celltype=CL:0002159!2.02e-11!13;CL:0001014!8.25e-10!2;CL:0001016!8.25e-10!2;CL:0000362!4.82e-09!8;CL:0000622!9.24e-09!5;CL:0000312!1.89e-08!5;CL:0002076!5.74e-08!43;CL:0002368!9.84e-08!13;CL:0000154!2.32e-07!6;CL:0002077!3.90e-07!33;CL:0000240!4.18e-07!6;CL:0000311!4.18e-07!6;CL:0000079!4.18e-07!6;CL:0000237!4.18e-07!6;CL:0000036!4.18e-07!6;CL:0000357!4.18e-07!6;CL:0000114!4.18e-07!6;CL:0002623!5.64e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000622;1.81e-15;5!CL:0000154;4.66e-13;6!CL:0001014;1.43e-10;2!CL:0001016;1.43e-10;2!CL:0000317;2.60e-10;2!CL:1000448;2.60e-10;2!CL:0002308;2.60e-10;2!CL:0002140;2.60e-10;2!CL:0000150;5.10e-09;9!CL:0000362;6.10e-09;9!CL:0002623;2.05e-07;3!CL:0002178;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.62e-15,5;CL:0000154,4.26e-13,6;CL:0001014,1.43e-10,2;CL:0001016,1.43e-10,2;CL:0000317,2.27e-10,2;CL:1000448,2.27e-10,2;CL:0002308,2.27e-10,2;CL:0002140,2.27e-10,2;CL:0000150,4.80e-09,9;CL:0000362,5.87e-09,9;CL:0002623,2.05e-07,3;CL:0002178,3.16e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;2.97e-19;1!DOID:3149;2.97e-19;1!DOID:3451;2.60e-10;2!DOID:4159;2.60e-10;2!DOID:0060122;2.60e-10;2!DOID:3493;2.60e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.62e-19,1;DOID:3149,5.62e-19,1;DOID:3493,3.27e-10,2;DOID:3451,3.58e-10,2;DOID:4159,3.58e-10,2;DOID:0060122,3.58e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001630!4.87e-10!2;UBERON:0005090!4.87e-10!2;UBERON:0001003!1.07e-07!14;UBERON:0007376!1.07e-07!14;UBERON:0007383!1.07e-07!14;UBERON:0003102!6.56e-07!95;UBERON:0001723!9.74e-07!3;UBERON:0001033!9.74e-07!3;UBERON:0010056!9.74e-07!3 | |ontology_enrichment_uberon=UBERON:0001630!4.87e-10!2;UBERON:0005090!4.87e-10!2;UBERON:0001003!1.07e-07!14;UBERON:0007376!1.07e-07!14;UBERON:0007383!1.07e-07!14;UBERON:0003102!6.56e-07!95;UBERON:0001723!9.74e-07!3;UBERON:0001033!9.74e-07!3;UBERON:0010056!9.74e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001389;2.97e-19;1!UBERON:0000026;2.97e-19;1!UBERON:0008784;2.97e-19;1!UBERON:0006058;2.97e-19;1!UBERON:0003663;2.97e-19;1!UBERON:0004256;2.97e-19;1!UBERON:0004708;2.97e-19;1!UBERON:0002101;2.97e-19;1!UBERON:0004709;2.97e-19;1!UBERON:0002529;2.97e-19;1!UBERON:0010538;2.97e-19;1!UBERON:0003661;2.97e-19;1!UBERON:0010890;2.97e-19;1!UBERON:0002471;2.97e-19;1!UBERON:0001383;2.97e-19;1!UBERON:0010758;2.97e-19;1!UBERON:0010707;2.97e-19;1!UBERON:0000978;2.97e-19;1!UBERON:0002103;2.97e-19;1!UBERON:0001665;2.97e-19;1!UBERON:0003823;2.97e-19;1!UBERON:0000154;2.97e-19;1!UBERON:0010709;2.97e-19;1!UBERON:0002419;2.60e-10;2!UBERON:0005090;2.60e-10;2!UBERON:0001630;2.60e-10;2!UBERON:0007771;2.60e-10;2!UBERON:0003297;2.60e-10;2!UBERON:0001821;2.60e-10;2!UBERON:0003487;2.60e-10;2!UBERON:0001820;2.60e-10;2!UBERON:0001723;2.71e-07;3!UBERON:0001033;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.56e-19,1;UBERON:0001389,1.56e-19,1;UBERON:0000026,1.56e-19,1;UBERON:0008784,1.56e-19,1;UBERON:0006058,1.56e-19,1;UBERON:0003663,1.56e-19,1;UBERON:0004256,1.56e-19,1;UBERON:0004708,1.56e-19,1;UBERON:0002101,1.56e-19,1;UBERON:0004709,1.56e-19,1;UBERON:0002529,1.56e-19,1;UBERON:0010538,1.56e-19,1;UBERON:0003661,1.56e-19,1;UBERON:0010890,1.56e-19,1;UBERON:0002471,1.56e-19,1;UBERON:0001383,1.56e-19,1;UBERON:0004357,1.56e-19,1;UBERON:0004347,1.56e-19,1;UBERON:0005420,1.56e-19,1;UBERON:0005732,1.56e-19,1;UBERON:0010758,1.56e-19,1;UBERON:0010707,1.56e-19,1;UBERON:0000978,1.56e-19,1;UBERON:0002103,1.56e-19,1;UBERON:0001665,1.56e-19,1;UBERON:0003823,1.56e-19,1;UBERON:0000154,1.56e-19,1;UBERON:0010709,1.56e-19,1;UBERON:0005733,1.56e-19,1;UBERON:0005730,1.56e-19,1;UBERON:0005090,1.89e-10,2;UBERON:0001630,1.89e-10,2;UBERON:0002419,2.27e-10,2;UBERON:0007771,2.27e-10,2;UBERON:0003297,2.27e-10,2;UBERON:0001821,2.27e-10,2;UBERON:0003487,2.27e-10,2;UBERON:0001820,2.27e-10,2;UBERON:0005089,2.27e-10,2;UBERON:0005088,2.27e-10,2;UBERON:0001723,2.32e-07,3;UBERON:0001033,2.32e-07,3;UBERON:0010056,2.32e-07,3 | |||
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| ||
|short_description=p@chr10:123847193..123847204,+ | |short_description=p@chr10:123847193..123847204,+ | ||
}} | }} |
Latest revision as of 11:09, 23 July 2015
Short description: | p@chr10:123847193..123847204, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:123847193..123847204, + |
Coexpression cluster: | C2041_cervical_immature_malignant_keratoacanthoma_salivary_nasal_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.62e-15 | 5 |
protein secreting cell | 4.26e-13 | 6 |
CD1a-positive Langerhans cell | 1.43e-10 | 2 |
immature CD1a-positive Langerhans cell | 1.43e-10 | 2 |
sebum secreting cell | 2.27e-10 | 2 |
epithelial cell of sweat gland | 2.27e-10 | 2 |
epithelial cell of skin gland | 2.27e-10 | 2 |
acinar cell of sebaceous gland | 2.27e-10 | 2 |
glandular epithelial cell | 4.80e-09 | 9 |
epidermal cell | 5.87e-09 | 9 |
acinar cell of salivary gland | 2.05e-07 | 3 |
epithelial cell of stomach | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.62e-19 | 1 |
keratoacanthoma | 5.62e-19 | 1 |
signet ring cell adenocarcinoma | 3.27e-10 | 2 |
skin carcinoma | 3.58e-10 | 2 |
skin cancer | 3.58e-10 | 2 |
integumentary system cancer | 3.58e-10 | 2 |