Coexpression cluster:C2083: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{Coexpression_clusters | {{Coexpression_clusters|coexpression_dpi_cluster_scores_median=-0.000331306736048601,0.0508893093548884,0.0416203100683695,0.108231434907506,0.196629518577288,0.0507310085666188,0.432278812194509,0.1288203199499,0.11585005407922,0.518839853389441,0.70625993786677,0.956450636641112,0.912746313865226,-0.23984999581685,-0.102552907459747,-0.186340943809843,-0.0439376215974342,0.00264131896701719,-0.0873332054318723,0.213755150079534,0.363488496175603,0.230396863795536,-0.154103911653095,-0.176402096773401,-0.0830264402114105,0.409632625175555,0.380763766600724,0.421849294586594,-0.605289638513186,-0.704165337529603,-0.456594925581227,0.830804751463905,0.829088678760844,0.705250354617873,-0.92430158227311,-0.448153584811247,-0.307984433315566,-0.940503611562445,-0.764989215500511,-0.694469343554258,-0.828918410287678,-0.879577059386635,-0.890736565942805,-0.633521311757126,-0.759199601686181,-0.802054718712672,-0.724913828220899,-0.679875210249577,-0.83091199521325,-0.646036964256947,-0.664680609471737,-0.85640747748562,-0.658601632668152,-0.799588397927443,-0.842320242325735,-0.816347286850372,-0.650591924337653,-0.896484588736814,-0.690587829305354,-0.764170602755053,-0.760094138920385,-0.69591375712917,-0.688438463203025,-0.863409627126745,-0.774881079489679,-0.678240146104065,-0.659697632242356,-0.889065402022546,-0.915917367496579,-0.788876592755623,-0.598935428429608,-0.714944404398971,-0.795554560715263,-0.742345019934928,-0.86356439441882,-0.764158086619911,-0.755159783737183,-0.940503611562445,-0.879978051104114,-0.748142034460529,-0.901109110876275,-0.753779610906254,0.132039133732217,0.28778361292873,0.282111476852222,0.0239236707960309,0.218196216677677,0.211073697303336,0.3289159397511,0.265729271126967,0.207092256862696,0.210198718297462,0.065058277066497,-0.123689045133909,-0.145557299313211,-0.0592468422173802,-0.940503611562445,-0.940503611562445,-0.865708866354425,-0.852232340562834,-0.879244579604105,-0.940503611562445,-0.940503611562445,-0.896822182658505,-0.839912718989845,-0.940503611562445,-0.888464348267202,-0.890977218000629,-0.913952985554825,-0.853428084838245,-0.706740245358062,-0.739188393786814,-0.91047847011437,-0.940503611562445,-0.940503611562445,-0.654742879614729,-0.870057904182439,-0.940503611562445,-0.848819051062236,-0.602662544080983,-0.595117677968136,-0.560584349289547,-0.78420066084729,-0.816772348023457,-0.665912718487361,-0.589128703994846,-0.665912718487361,-0.738531531836941,-0.847466342602535,-0.830021555170378,0.596467014734487,0.734083645573051,0.374778250446609,-0.714022560616087,-0.741185258463502,-0.613002258174662,-0.92968103641758,-0.672655681888988,0.17523915300483,0.416312531543246,0.2887602722028,-0.0479236394072131,0.830535937930706,0.749884551148194,-0.940503611562445,-0.905645567757354,-0.840507433177812,-0.823311810709545,-0.77489225194077,-0.869146038504621,0.377360713713535,0.335095363014805,0.340475911612677,0.347113599885274,0.530146105410357,0.523150051671688,0.37810089678252,0.208510363805762,0.391829180737667,0.181393639466158,0.66299128296899,0.876501662189557,0.602428997104157,0.319632251819193,0.515132338746312,0.40165005596814,0.496466055929325,0.357128789588764,0.0345044848670177,0.38928279203157,0.315283067356964,-0.665912718487361,-0.850403284064799,0.839887885080052,0.0242056233458504,-0.109965490730516,-0.178426814007924,-0.347831572338855,0.0178531327196687,0.425706072242102,0.58273840618955,0.332699030229784,0.284990471296482,0.454883050091013,0.444399659824497,0.896782979465335,0.697813198664082,0.0772165770767234,-0.124537032620285,0.0913697070450362,-0.0266126561865624,-0.145841297546912,0.160851529278722,0.0455290503261747,0.200976058260878,0.0593330775331899,0.263042047442755,0.219059690939301,0.251882853821688,0.602153680459202,0.642524873377945,-0.0914149011168945,-0.0829613244426581,0.190642464009861,0.139840830166675,0.403128533406339,0.197503816202157,0.233176629153704,0.0513320280881077,0.190700688648958,0.188112312770285,0.0635671742089474,0.215467741771819,0.269617471235911,0.379541370522273,-0.0787053734216731,0.014922707773266,0.201160026705808,0.232780194072844,-0.0152710779779935,0.0507909731564319,0.104390669938244,0.215635301585499,0.656467036166366,0.676467749624571,0.655562186857927,0.309977692082755,0.254228972032077,0.278440508959255,0.144682604748053,0.270535266963953,0.177802665733558,0.512501810356038,0.532329287669647,0.640394153646094,0.242571126435491,0.321017570613486,0.116748170669378,0.105864895101192,0.0215261528077674,0.133741317842927,0.0906869824624444,0.0403584073938267,0.0935774309537255,0.0434124391353414,-0.00903382572659185,0.648659877217051,0.509245510585703,0.554552733484837,0.432338764777607,-0.078127840683403,-0.195227013418133,0.182111581648041,-0.940503611562445,0.190133620582752,0.222005850981598,0.73951661352198,0.665670986095313,0.425027091408247,0.542517740784844,-0.367003317912706,0.314033307949611,0.423982327052064,-0.210116573743729,0.526080643010963,0.548375672578962,0.631849101768784,0.55751175403739,0.0568815292086525,-0.0274192539905551,-0.72293840347766,-0.611035912626888,-0.770375840476323,0.75869454534132,0.777993425795427,0.675614322017085,0.525479192010493,0.417032628961375,0.718216020202749,-0.940503611562445,-0.940503611562445,-0.462861440405634,-0.681889519889231,-0.568597960563245,-0.50837970338919,-0.160484144758742,-0.123308084944754,0.173493270202138,-0.197664912279707,0.0580090695483664,-0.574431411871394,0.21537496538075,0.772145547866291,0.109732940693853,-0.17074067717266,0.747663102373713,0.246530092818749,0.484627437616485,0.189324969836873,0.0087425309281963,0.148386712988967,-0.120114702586326,0.633576239416672,0.365543189394652,0.211523162261033,0.0915483570865886,0.552665063936147,-0.00464504881622745,0.461031522939047,0.390538853231899,0.468179241859012,-0.767695431983868,-0.940503611562445,-0.940503611562445,-0.175164293238696,-0.114103824105017,-0.940503611562445,-0.297169388399863,-0.695248438755883,-0.678242508229778,-0.234878143773002,-0.677051792340013,-0.613057611208744,-0.509230119118629,-0.547594536720367,-0.692144334004892,-0.519951895918339,-0.632281248645268,-0.665282110901303,-0.741706173385291,-0.665912718487361,-0.585933339521903,-0.0571983900360378,-0.167015367868608,-0.250856662542861,0.457767225529498,0.112807300722211,0.288619619644978,0.189304305256764,-0.0437225619632457,-0.180878170217904,-0.175844090349332,-0.2893491743317,-0.0530006037071001,-0.13567099864648,0.563182371782829,0.513420557781784,-0.480419879903141,-0.639957947112626,-0.546139500670899,0.928593033544796,0.945097693329537,0.994947650639342,-0.073257455912837,-0.0759478840828067,-0.130655776830572,-0.137559073702406,-0.119178483042891,-0.120341124917942,-0.151314387239507,-0.0269534972501812,-0.249521413838999,-0.262178295338303,0.158689962497414,-0.0597023384002295,0.266146467379733,0.826568617956096,0.276532614042143,0.427873023005047,0.203509638104167,0.542915408147662,0.240090163367533,0.130087421620134,0.409698912020812,0.366041368227457,0.206950866445727,0.21380627307934,0.335363690279306,0.10940502656003,0.336325283204621,0.417070751814967,0.542366099308547,0.246770052630025,0.0825417847160001,0.352541061530252,-0.677467272519739,-0.677792076803989,-0.371497645892286,0.0496797539663711,-0.384376783153665,0.206830901637818,0.212375516382386,0.193091804365435,0.851860673532103,0.714063619354855,-0.299291785950109,-0.556575800808504,-0.133997645054271,-0.142590660444275,-0.151259133748196,-0.424706250199984,-0.108550394043986,-0.303306502658371,-0.354557567861518,0.509540107864768,0.452671579082856,0.264073223546659,0.274150495182367,-0.0608159898667816,-0.37413433208323,-0.26519370385141,0.744285371800047,0.440965593886984,-0.415708487331328,-0.359663044736132,0.171746901377285,0.503509985879235,0.102648297892522,0.337384427561626,0.246315736850722,-0.107109378639224,-0.0407946520074516,0.572005242613279,0.475364594802425,0.166376303812417,0.208764129008232,0.432652202451448,0.677472595577199,0.0603437919811962,0.714552211940831,0.169361614795929,0.325951307723736,0.38345969409186,0.50258712033391,0.351522700318963,-0.201009128247444,0.317474784367657,0.319965313825636,-0.0455137959929277,-0.088606085780647,0.221054857542639,0.081758925152265,0.283914651421171,-0.253170525438254,0.0993340323452335,0.248530883972851,-0.397793215389749,-0.490063699985731,-0.332094891815477,0.0086884675890728,0.338823366841473,0.577493265155349,0.824537336398836,0.935817075102517,0.265264270055173,0.904134786645203,0.798872005054613,0.8635441243836,0.484582449797122,0.335820531684658,0.371204216978564,0.197463200383137,-0.0763261739621098,-0.18773955730429,0.249319732061306,0.187030998204144,0.291490836382979,-0.91846431377461,-0.940503611562445,1.0249165043524,0.547094516608408,0.929773700311345,-0.940503611562445,0.165593091986675,-0.940503611562445,0.243288484703175,-0.940503611562445,0.167382768012022,0.0242502262612377,-0.940503611562445,-0.940503611562445,-0.140635309950719,-0.940503611562445,0.136862700507075,0.496940818182323,-0.0237444212377789,-0.940503611562445,-0.167433099150632,-0.179006035813186,-0.0224263708767658,-0.940503611562445,-0.441672753044429,-0.301741845026135,0.404301523077374,0.597996693609238,-0.183898999185507,0.226751550742013,0.454242980957004,-0.870317045762756,-0.940503611562445,0.48390414912901,0.468454567536974,0.609880638200972,0.24080586235441,-0.637662434451892,-0.68823179192265,-0.101196526045007,-0.940503611562445,-0.43970675274818,0.549558405855434,0.178420588859109,-0.336732093892644,0.473635943545511,0.245879336052673,0.23469945631676,0.309353482604157,-0.209302341652843,0.31520379131683,0.365430062127773,0.307173674211561,0.306746243064348,-0.793344060353754,-0.578966494128398,-0.515547904955824,0.057519309015329,-0.940503611562445,0.373321938873619,0.6927699385454,0.172105462861881,-0.343262749307636,-0.222191826155062,-0.676330184675561,-0.203626217166648,-0.740650378498608,-0.721693154848164,-0.768786251665365,-0.658670269610484,-0.802658763751981,-0.353440858493674,-0.341045338020007,0.58951538398699,0.174620293201144,0.285362844070237,0.100124361716809,-0.0178832089915167,0.799645868348369,0.239670924449711,0.37631325585185,-0.000523506987339301,-0.787620233276314,0.127140100432252,0.083961390429054,0.0736011086975118,0.0901244799709838,0.0998448716562265,-0.0508975540384342,0.0514103527970311,-0.512477880606434,-0.0709893714293959,0.508649016477874,-0.897967433827205,0.448652745910679,0.445236948417602,0.529915307355948,-0.940503611562445,-0.940503611562445,-0.940503611562445,-0.63445587468638,0.14717199614147,-0.940503611562445,0.670365542139788,-0.00988384706914218,-0.525550984958694,-0.00945644593328739,0.385676652326802,-0.798206211129542,0.20131180190088,-0.412316404702565,0.0230258332913179,-0.829841638827514,-0.940503611562445,-0.834694307088109,-0.76981362569593,-0.80646881811768,-0.604340988577937,0.0843252328844419,0.530066486413731,0.499060550574764,0.188171623566551,0.733733619513603,-0.485332922706017,-0.484039740629248,-0.460516771470283,0.309305051991251,-0.940503611562445,0.0696518504641967,-0.106271063128177,-0.0404749425142668,-0.857255235679409,0.285280335685816,0.0550375279895868,0.241780279076882,0.71008589732353,-0.212651475180921,-0.178621612146424,-0.185732625919561,-0.334099884918107,-0.464524120681714,0.124758256950794,0.0656336640942071,-0.0218358830044105,-0.940503611562445,-0.0317122271326203,-0.598285515450011,-0.722185082749519,-0.327534462463819,0.568418772470428,-0.438847083055224,0.52152094235802,0.289015988067204,0.780691889500773,0.516703049519247,0.705757238748572,0.739080154528073,0.418208539378186,0.289398070205236,0.285416146974918,0.301771624499452,0.29495998453184,0.281434513321312,0.0476681950983246,0.40212848310909,-0.761022282338939,-0.605836435259504,0.312174914197395,0.369754510074936,0.338688643142894,-0.801138746945762,-0.239323830053821,-0.786462431811036,0.80921407045923,-0.0529681770802339,0.0423088211022808,-0.831164084865605,-0.298082252165803,0.137198523673711,0.260469027814944,0.65119468722714,-0.848459221481161,-0.687070735358148,-0.396806365374906,-0.680271337004504,-0.451610022513609,-0.257937280954716,-0.590637263265892,-0.0981643715118018,0.293508287938052,0.380186974099169,-0.608584866035131,-0.416085897929507,0.167129757940422,0.183181583232516,0.63958665824251,0.0744470748230136,0.381670704883835,0.550188004111956,0.182993609010255,0.0362366596790596,0.24977300855541,0.138679832745943,0.0974498538378828,0.0341514723624215,-0.301601593802861,-0.653569735304548,-0.865783202725739,-0.80642721403816,-0.627631769878171,-0.144283388787614,-0.450565259754465,-0.337576866951739,-0.229770773459946,0.347333147391113,-0.23064463635898,-0.590214367949102,0.29013603373945,-0.796975820102655,-0.447873605880939,-0.278081391372332,-0.0172626376886035,-0.28122653834031,-0.364716457269001,-0.0534779215447739,-0.305710601949923,-0.313817299714919,0.0738830897498677,-0.0862508339356154,-0.128902302834205,-0.068135281424218,-0.480843495971082,-0.0222848094733101,-0.433974958846255,0.156098430852296,0.375403003121104,0.320202320378466,0.242207760375095,0.0976723010823573,0.082298887919872,0.172992194202447,-0.393405077350268,0.390367976923813,0.0726518963190095,-0.585657846127031,-0.391360273650743,0.402597072891069,0.600123097346735,-0.390075640083898,0.124549976701043,0.325805893653566,0.374233396321084,0.288557631776547,-0.231331454805405,-0.135340911423424,0.504380976320292,0.370699025319169,0.663336041165124,0.791302447718796,-0.23071337104243,-0.105510262337713,0.422275235604051,-0.714363060984258,-0.122485530101222,-0.409559930286344,-0.665836159596096,0.007050280993803,-0.0320175012159574,0.447142140888693,-0.864677107761361,-0.0307266140551736,-0.940503611562445,0.150665515224225,-0.12706138372893,0.220353545205423,0.516233577540589,-0.522832980667091,-0.940503611562445,-0.881118049413844,-0.872332017685707,-0.874271520892536,-0.937737215629096,-0.940503611562445,-0.940503611562445,0.207542478330213,0.176879665976125,-0.812798516360463,0.000913527192612548,0.774181724109668,-0.774974427930383,-0.782522060561885,-0.720366175669262,-0.899989119680564,-0.786324350386485,-0.686645253951889,-0.758125419525497,-0.172094948064573,0.550217738342108,0.668366067131278,0.768078571217431,0.51403679337312,-0.30791829353206,-0.126725586839616,-0.268436547178819,0.031417773629601,0.133605975318423,-0.150818874714446,-0.255736295018842,0.0970316022053641,0.0152806239004508,-0.819865703279544,-0.886839619674405,-0.697156072006335,-0.722066791713508,-0.676706612523718,0.197399371836972,0.144910232403431,-0.940503611562445,0.356574808723254,0.0363868080753288,-0.0518499052284987,-0.452840778756552,-0.438077788009143,0.329391282687945,0.581574425956001,0.483194294690334,-0.708227908255558,-0.797983084659711,-0.0126167593391259,0.283708693924974,0.197438800680726,-0.908815239106779,0.331589075075934,0.198469055132424,0.204508804231325,0.546591869897755,-0.190522947224138,0.263325716611559,-0.940503611562445,-0.705608647867488,0.043173636164995,0.379665630457726,0.47153490584715,0.180029990407352,0.119585341043014,-0.436283857901783,-0.466724084696927,0.0971019255430518,0.0467391487729312,-0.0923202644115497,-0.0843794690653191,-0.433232575495444,-0.0679784450741659,-0.0891239702056525,0.588626843633487,0.767445178285776,-0.138152937036648,0.0441772654716641,-0.232674484922838,-0.72550883408999,-0.853241066550346,-0.365428870186974,0.310197864362472,-0.115062196000806,0.546626542308749,0.509107480928721,-0.59881797176499,0.0163583310454651,-0.254047952348819,-0.2923017003567,-0.464027057494651,-0.412621005017207,0.0643380739043953,0.366301338490486,0.365234394279043,0.69987755366162,0.700525985795644,0.3474742671675,-0.452610672605671,0.156357875515234,0.0270794986529358,-0.518459216330788,-0.335013022748871,-0.720209341099691,-0.690996645677188,0.250786424971356,-0.418797612411804,-0.312444118045186,-0.178797273231526,-0.326153629804696,-0.481680135106123,0.129734929142243,0.0565912363392675,-0.222449827040213,0.135438646081114,-0.121940135203159,-0.0383456493250085,-0.671253250880511,-0.644185886788104,-0.689493890221494,0.266998793392265,0.0220667838632649,-0.083910743073647,0.169445454388522,-0.00303825411509145,0.485633183483688,0.245905532789232,0.387916738879503,0.260274201123675,0.261383103297644,0.492705544950904,0.250131554136877,0.247115872196824,-0.685710656632842,-0.089042628091175,0.206973299228919,0.245729499887823,0.191108634360105,0.0793684284534261,0.267841385195825,0.390509265442048,0.458519616642934|full_id=C2083_Placental_acantholytic_Amniotic_Endothelial_Tracheal_Urothelial_Fibroblast|id=C2083|ontology_enrichment_celltype=CL:0000066!1.90e-22!253;CL:0002321!4.26e-19!250;CL:0000076!2.82e-14!63;CL:0000223!6.17e-10!58;CL:0002076!1.44e-09!42;CL:0000222!9.94e-09!121;CL:0002139!2.18e-08!24;CL:0000213!2.78e-08!58;CL:0000215!2.78e-08!58;CL:0000115!1.40e-07!36;CL:0002078!4.24e-07!45;CL:0000071!9.04e-07!18;CL:0002546!9.04e-07!18|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0004119!4.32e-21!160;UBERON:0000925!4.32e-21!160;UBERON:0006595!4.32e-21!160;UBERON:0001007!5.42e-17!145;UBERON:0001555!5.42e-17!145;UBERON:0007026!5.42e-17!145;UBERON:0003914!1.30e-16!117;UBERON:0000475!5.69e-14!264;UBERON:0000477!1.45e-13!373;UBERON:0001009!1.81e-13!112;UBERON:0004921!3.35e-13!118;UBERON:0000490!1.76e-12!148;UBERON:0004872!1.84e-12!83;UBERON:0003102!2.00e-12!99;UBERON:0004535!2.70e-12!109;UBERON:0002049!6.86e-12!78;UBERON:0007798!6.86e-12!78;UBERON:0001048!2.30e-11!160;UBERON:0000481!8.25e-10!342;UBERON:0000055!8.32e-10!68;UBERON:0004111!3.14e-09!240;UBERON:0005911!5.16e-09!82;UBERON:0002100!5.72e-09!199;UBERON:0003103!7.39e-09!68;UBERON:0000119!2.24e-08!309;UBERON:0000161!3.69e-08!36;UBERON:0001041!4.01e-08!87;UBERON:0005256!4.01e-08!122;UBERON:0004923!5.02e-08!66;UBERON:0009569!5.33e-08!112;UBERON:0000483!5.56e-08!306;UBERON:0003104!8.16e-08!160;UBERON:0009142!8.16e-08!160;UBERON:0007500!1.60e-07!59;UBERON:0001981!1.60e-07!59;UBERON:0004537!1.60e-07!59;UBERON:0006965!1.60e-07!59;UBERON:0003929!1.62e-07!54;UBERON:0001008!1.70e-07!48;UBERON:0007100!1.74e-07!27;UBERON:0006554!2.38e-07!47;UBERON:0000487!6.11e-07!22;UBERON:0004638!9.04e-07!18;UBERON:0001986!9.04e-07!18;UBERON:0004852!9.04e-07!18|tf_chipseq_enrich=CCNT2#905;4:6.33620157696263:0.000620310058721564:0.00511161134786346!CTCF#10664;4:5.36025637307503:0.00121114538164362:0.0081543845096363!E2F1#1869;4:4.90738921487932:0.00172402235736179:0.0106233506980062!E2F6#1876;4:5.01715573169739:0.0015780219347306:0.00994851097677949!EGR1#1958;4:4.98817909481014:0.00161501150007605:0.0101254764111204!ELF1#1997;4:4.25809795880754:0.00304152556578124:0.0160512323680963!HEY1#23462;4:4.04011104310571:0.0037530463691798:0.0185466267507698!MAX#4149;4:6.45255550900712:0.000576761319564549:0.00484409935295552!PAX5#5079;4:6.66956553117783:0.000505277416948326:0.00443041458724424!TAF1#6872;4:3.34304628574529:0.00800566489870165:0.0321146009739006!TBP#6908;4:3.70677068709639:0.00529637781478435:0.0243431062182926!YY1#7528;4:4.91117074985386:0.0017187183805544:0.0106598508787173!ZBTB7A#51341;4:7.3519093078759:0.00034222354001599:0.00345896489845446|tfbs_overrepresentation=0.191353,0.0774498,0.814139,0.0631091,0.257053,0.363996,0.0569281,0.510252,0.043387,0.0341265,0.181435,0.288577,0.243414,0.164339,0.193153,9.67067e-05,0.183412,0.128744,0.0698403,0.141416,0.243245,0.172742,0.107781,0.124486,0.0550418,0.276459,0.268949,9.7357e-06,0.186914,0.122514,0.26347,0.149094,0.0239693,0.267529,0.0877018,0.111013,0.0725724,0.0568767,0.157159,0.0879352,0.126525,0.0326801,0.182216,0.2375,0.157881,0.0480278,0.0503649,0.234372,0.145553,0.158244,0.19996,0.0715789,0.0924421,0.12203,0.255843,0.0508907,0.140644,0.0412226,0.103044,0.138225,0.0390464,0.194086,0.142115,0.0999599,0.0720888,0.0667453,0.439574,0.0792005,0.113084,0.216289,0.470097,0.0892037,0.116917,0.155921,0.00995563,0.0227583,0.126543,0.0578308,0.0493551,0.00965832,0.125428,0.290468,0.0562614,0.150119,0.368178,0.320801,0.0848546,0.268505,6.78362e-06,0.0827752,0.112676,0.0655645,0.12511,0.0626609,0.112199,0.150351,0.0314145,0.199405,0.121709,0.347653,0.0759036,0.350158,0.184542,0.0491142,0.280878,0.0541957,0.0883058,0.423154,0.187509,3.0908e-07,0.23573,0.0450707,0.194256,0.0235108,0.132631,0.0447483,0.0270258,0.0748174,0.180926,0.110194,0.215858,0.275495,0.182323,0.112709,0.134107,0.228632,0.119051,0.0196757,0.110868,0.175735,0.078637,0.0985137,0.0755515,0.0302655,0.164103,0.141472,0.085537,0.0730922,0.0438087,0.0052702,0.0302521,0.166414,0.262198,0.202388,0.701894,0.0913381,0.129544,0.110696,0.0515825,0.157774,0.0366263,0.186826,0.233377,0.0352845,0.0565357,0.153577,0.0984158,0.29227,0.0683304,0.0447121,0.291455,0.124982,0.152417,0.192028,0.346873,0.149398,0.0530169,0.166112,0.0534404,0.392741,0.2321,0.179282,0.202544,0.0715212,0.105131,0.118265,0.182591,0.234755,0.230552,0.0472274,0.205973,0.159869,0.0363736,0.15105,0.0970713,0.155237,0.236268,0.0532055,0.108938,0.224443,0.140245,0.241581,0.160458,0.292792,0.147332,0.0622664,0.102951,0.0795624,0.0891668,0.14349,0.117261,0.0797088,0.0408965,0.0799774,0.177664,0.329956,0.346995,0.197158,0.265132,0.230439,0.0606832,0.136664,0.158184,0.147626,0.393313,0.218801,0.21271,0.132273,0.0830988,0.134907,0.184613,0.00379585,0.202467,0.208718,0.0972471,0.165147,0.180711,0.112956,0.0797807,0.0790532,0.309911,0.476758,0.0553945,0.10068,0.125804,0.122288,0.0624687,0.334388,0.21183,0.275612,0.235571,0.435782,0.128998,0.109226,0.151958,0.178155,0.107176,0.146021,0.463127,0.15291,0.206234,0.238926,0.239646,0.128521,0.1286,0.207017,0.14037,0.259646,0.0916845,0.687863,0.0816983,0.226367,0.211672,0.167038,0.0457509,0.106603,0.106727,0.12083,0.154253,0.0993998,0.352707,0.0834863,0.324356,0.545829,0.113754,0.0504034,0.169684,0.690367,0.810881,0.869559,0.389734,0.668426,0.00966148,0.0719958,0.420045,0.73391,0.332539,0.545329,0.464128,0.389374,0.594055,0.414547,0.489273,0.413223,0.639461,0.137229,0.34505,0.369161,0.153719,0.49089,0.112403,0.702495,0.241524,0.45167,0.234628,0.0386001,0.143893,0.41477,0.279946,0.524104,0.467825,0.563725,0.404903,0.0806606,0.624969,0.460819,0.511459,0.221488,0.322903,0.350886,0.380582,0.583749,0.398372,0.286293,0.00272999,0.34907,0.00114691,0.395864,0.683133,0.368633,0.188516,0.682118,0.512763,0.369971,0.578349,0.537928,0.464342,0.318915,0.714007,0.235444,0.48585,0.000632751,0.0391412,0.349116,0.302142,0.239545,0.432689,0.640367,0.343881,0.730486,0.606382,0.617741,0.626346,0.316925,0.356561,0.573659,0.211506,0.0883859,0.0962508,0.238465,0.70198,0.128535,0.112487,0.508325,0.187096,0.651927,0.656755,0.188468,0.280307,0.393583,0.212518,0.0596868,0.0984075,0.293026,0.0537754,0.117621,0.605423,0.372182,0.109146,0.578951,0.365653,0.41035,0.0697989,0.35234,0.00195994,0.525923,0.291917,0.421082,0.25441,0.202782,0.0270471,0.517933,0.584705,0.517001,0.252778,1.91881e-08,0.419676,0.188259,0.189182,0.477589,0.46699,0.546448,0.560187,0.321282,0.198207,0.0616078,0.178485,0.329745,0.175552,0.129238,0.283924,0.370995,0.360161,0.429696,0.386216,0.385297,0.126311,0.606408,0.627185,0.360203,0.333725,0.447838,0.289666,0.500627,0.513045,0.452694,0.565545,0.00014407,0.265037,0.261923,0.754776,0.53531,0.341771,0.424526,0.657528,0.356381,0.184395,0.55524,0.0766597,0.206945,0.304719,0.462531,0.296994,0.244339,0.117049,0.0786167,0.629381,0.729876,0.433821,0.64428,0.436806,0.576549,0.499072,0.744662,0.734628,0.397546,0.0919254,0.0735469,0.248103,0.102621,0.0760107,0.187642,0.286156,0.261868,0.184029,0.183047,0.247151,0.146385,0.365815,0.0576261,0.382413,0.164977,0.175633,0.139918,0.00937608,0.0828344,0.4729,0.0238089,0.383126,0.354433,0.48311,0.0614918,0.219485,0.149782,0.136923,0.118103,0.113892,0.207214,0.140201,0.0580534,0.00518407,0.161297,0.168389,0.270152,0.249506,0.432751,0.0660736,0.108971,0.0879235,0.235214,0.145546,0.28124,0.417003,0.251882,0.172263,0.243319,0.0637178,0.036377,0.500692,0.166608,0.227224,0.238082,0.219023,0.115115,0.124916,0.0149794,0.28498,0.140114,0.348988,0.00641248,0.224626,0.183585,0.271662,0.03989,0.171436,0.05892,0.0691994,0.268299,0.198844,0.104946,0.127738,0.207615,0.161213,0.118999,0.0737069,0.357807,0.621787,0.178782,0.019419,0.0866228,0.271849,0.282657,0.105411,0.0997542,0.209692,0.248936,0.0725263,0.102587,0.0742013,0.0552936,0.0457886,0.0514927,0.324236,0.220368,0.258624,0.064656,0.226143,0.460406,0.0438521,0.435508,0.281453,0.0522771,0.0787278,0.0372041,0.159873,0.142462,0.143935,0.332403,0.0379537,0.6545,0.187953,0.051459,0.114868,0.0726892,0.18732,0.32305,0.278397,0.245002,0.170848,0.487259,0.302909,0.363016,0.100188,0.223102,0.107653,0.235857,0.419621,0.191914,0.184022,0.216557,0.182956,0.116818,0.389792,0.36316,0.0625685,0.124464,0.186295,0.173134,0.101893,0.142875,0.167635,0.171311,0.787798,0.00885745,0.0685131,0.130287,0.0661526,0.0815772,0.0993937,0.122878,0.187329,0.0451012,0.0976639,0.351199,0.833813,0.0560157,0.278645,0.365775,0.155708,0.248017,0.22995,0.652972,0.0760151,0.0629459,0.00483066,0.0803251,0.226641,0.0832234,0.0939463,0.286748,0.367925,0.0471607,0.163865,0.226359,6.13141e-08,1.37583e-08,0.265324,0.279778,0.141699,0.0887743,0.142302,0.0653269,0.125712,0.264432,0.0994829,0.0604041,0.144185,0.0925862,0.289561,0.199201,0.049937,0.172796,0.0595495,0.071232,0.149346,0.121978,0.22302,0.137423,0.284016,0.0754883,0.299492,0.100006,0.0756617,0.197817,0.251078,0.279874,0.133127,0.016612,0.223717,0.426452,0.196838,0.0826805,0.246601,0.193021,5.55479e-05,0.202165,0.0946865,0.120618,0.079499,0.18762,0.195618,0.127688,0.201169,0.220353,0.24948,0.178639,0.291976,0.320355,0.364334,0.15547,0.110256,0.415419,0.14794,0.147307,0.240761,0.225961,0.124417,0.335582,0.317428,0.182843,0.130771,0.327768,0.135777,0.147842,0.0339286,0.217363,0.119015,0.690952,0.21618,0.243266,0.107021,0.238657,0.20272,0.00173055,0.00303153,0.0780061,0.00683871,0.230477,0.279823,0.000475092,0.502112,0.369553,0.0478217,0.507599,0.170854,0.0575231,0.174063,0.514243,0.459091,0.54832,0.502211,0.296013,0.649813,0.537932,0.0247432,0.523209,0.189126,0.25423,0.490559,0.45013,0.500698,0.472542,0.685908,0.160788,0.529642,1.90238e-06,0.483077,0.590496,0.0671621,0.541914,0.627201,2.65013e-07,0.00709718,0.290703,0.254935,0.366999,0.478691,0.360199,0.0690757,0.657141,0.0021436,0.365494,0.212703,0.56318,0.0762097,0.315494,0.579886,0.421038,0.569409,0.328518,0.545608,0.310552,2.10702e-07,0.00472069,0.103928,0.00493585,0.209437,2.49014e-05,0.401218,0.0651244,6.65779e-08,0.464001,0.000283806,0.579004,1.68802e-06,0.0387841,4.1262e-05,0.261575,0.257956,0.264245,0.379063,0.326516,0.522925,0.436016,0.475063,0.202522,0.183837,0.00598078,0.126097,0.0146433,0.116739,0.212239,0.294954,0.156999,0.35974,0.025886,0.39549,0.234254,0.357409,2.30198e-07,0.365184,0.50338,0.620526,0.404625,0.172147,0.424691,0.715362,0.139684,0.62689,0.00041289,0.642173,0.284496,0.00629645,0.512178,0.563206,0.829402,0.684899,0.263302,0.552023,0.180735,2.6676e-05,0.216102,0.254659,0.109605,0.00184531,0.0121932,0.226491,0.417131,0.463987,0.627953,0.503881,0.454761,0.0840572,0.0295677,0.452129,0.0508933,0.261657,0.346776,0.466529,0.0458396,0.438176,0.349112,0.155207,0.385425,0.307816,0.461541,0.386339,0.382854,0.598787,0.0285097,0.07062,0.319747,0.475047,0.557967,0.0153563,0.282281,0.612712,0.2536,0.246827,0.202347,0.70712,0.387134,0.559969,0.358813,0.000992912,0.574252,0.0317703,0.346636,0.457747,0.348802,0.476541,0.579645,0.447581,0.42505,0.254628,0.131374,0.479347,0.416962,0.0806585,0.378333,0.738545,0.264038,0.22798,0.102495,0.350933,0.263896,0.0446972,0.24452,0.329284,0.242783,0.0947248,0.336551,0.210656,0.246234,0.211271,0.281295,0.267248,0.118257,0.125087,0.215123,0.321224,0.133173,0.325254,0.266651,0.546295,0.231754,0.249415,0.283107,0.285648,0.427316,0.391071,0.279553,0.25563,0.240967,0.160955,0.256687,0.0432189,0.122439,0.16188,0.23235,0.290415,0.353147,0.112422,0.170886,0.267687,0.315656,0.284866,0.0887542,0.267811,0.338547,0.147872,0.189388,0.293546,0.210125,0.292967,0.218414,0.0509944,0.0871471,0.0689852,0.0602698,0.341188,0.259328,0.437467,0.201057,0.15696,0.129351,0.141936,0.0786166,0.276997,0.205513,0.282389,0.251421,0.162089,0.330223,0.0874139,0.233244,0.207281,0.327401,0.195748,0.27845,0.161712,0.237871,0.239139,0.095257,0.328852,0.332769,0.262022,0.274403,0.266687,0.184534,0.248707,0.31749,0.15156,0.287598,0.313858,0.223773,0.25788,0.181895,0.253768,0.0528669,0.202977,0.170837,0.327002,0.28543,0.222656,0.228479,0.127111,0.259989,0.390754,0.355805,0.279739,0.108118,0.259901,0.139723,0.0708274,0.0710478,0.196248,0.102645,0.0539258,0.0709978,0.401939,0.332746,0.271338,0.242121,0.298673,0.244395,0.106889,0.128632,0.0845989,0.159153,0.0842401,0.13698,0.0874421,0.100355,0.167854,0.142846,0.0583767,0.088258,0.117657,0.0486914,0.175784,0.262778,0.373453,0.362662,0.433518,0.184359,0.00831677,0.325785,0.257476,0.291176,0.081972,0.322827,0.229571,0.359036,0.335984,0.171704,0.208256,0.265058,0.256405,0.362898,0.302133,0.0976762,0.151361,0.279606,0.0457079,0.150674,0.251128,0.246177,0.35674,0.35852,0.318525,0.213257,0.287217,0.122782,0.410951,0.289049,0.266974,0.125746,0.112897,0.398354,0.222091,0.205977,0.34423,0.0936726,0.343425,0.132374,0.285122,0.22741,0.203996,0.276721,0.321965,0.264707,0.450113|tfbs_overrepresentation_for_novel_motifs=1.44014,1.03954,0.581696,0.741427,0.534346,0.739643,1.92131,0.395818,0.392841,1.44778,1.68405,0.867962,0.905351,0.809319,0.532789,0.559384,1.05593,0.471262,0.356737,0.223552,0.581762,0.975621,0.731221,0.528529,0.632849,0.892087,0.849366,0.728867,1.33003,0.297585,0.682839,1.09415,1.10579,0.911389,0.49475,0.0842336,1.23038,0.740899,0.463978,0.371755,0.493145,0.66492,0.183156,0.53106,0.0946706,1.49501,0.822818,0.694903,0.173425,0.538016,2.09659,0.83543,0.25073,2.63818,1.33024,0.812467,0.54284,0.777235,0.297448,0.776148,1.13655,0.825354,0.393426,1.02706,0.844545,0.991076,1.42026,1.79268,1.08337,1.62905,0.650393,0.402607,0.248021,1.32819,0.893276,0.859396,0.305238,1.00941,1.08,0.62601,0.362435,1.02594,0.844168,0.399165,1.27559,8.09613,0.221873,0.793068,0.934646,1.89266,1.51507,1.24792,1.11156,1.12407,0.535192,0.456994,0.354969,1.15558,0.939507,0.272395,0.465545,1.1057,1.14983,1.05974,0.979006,0.701817,1.04326,0.805616,2.59267,0.516141,1.44917,1.14697,0.575476,0.717043,1.46636,0.489254,1.27972,0.681522,2.26288,0.444962,1.31973,0.932085,0.736652,0.856196,1.57854,1.0102,0.814847,1.11673,1.36323,0.458105,1.24863,0.68598,1.37788,0.852645,1.52813,0.283547,0.676268,0.729481,1.48509,2.34913,1.94535,1.44718,0.8167,1.15194,0.980848,0.768101,0.963351,2.1895,0.661255,1.11576,1.23342,1.58968,1.24902,0.383416,0.824835,1.65997,0.917558,0.518428,0.632914,0.600782,1.44595,1.23002,1.07918,0.604379,0.997702,0.843324,0.423521,0.820225,8.99968|tfbs_overrepresentation_jaspar=MA0003.1;10,MA0004.1;0.71247,MA0006.1;0.532262,MA0007.1;0.6918,MA0009.1;1.20602,MA0014.1;1.34758,MA0017.1;0.577281,MA0019.1;0.873355,MA0024.1;1.09684,MA0025.1;1.34373,MA0027.1;2.83281,MA0028.1;0.550763,MA0029.1;1.11704,MA0030.1;1.10506,MA0031.1;1.03735,MA0038.1;0.824639,MA0040.1;1.12314,MA0041.1;0.732902,MA0042.1;0.697662,MA0043.1;1.20635,MA0046.1;1.19471,MA0048.1;2.82503,MA0050.1;0.69864,MA0051.1;0.820063,MA0052.1;1.12718,MA0055.1;0.125954,MA0056.1;0,MA0057.1;0.248209,MA0058.1;0.605914,MA0059.1;0.604454,MA0060.1;0.393285,MA0061.1;0.360128,MA0063.1;0,MA0066.1;0.825101,MA0067.1;1.53181,MA0068.1;0.313194,MA0069.1;1.19071,MA0070.1;1.17908,MA0071.1;0.782546,MA0072.1;1.1744,MA0073.1;1.93422,MA0074.1;0.819248,MA0076.1;0.623864,MA0077.1;1.16637,MA0078.1;0.926725,MA0081.1;0.604638,MA0083.1;1.21381,MA0084.1;1.72172,MA0087.1;1.17185,MA0088.1;0.182167,MA0089.1;0,MA0090.1;0.640115,MA0091.1;0.715356,MA0092.1;0.673508,MA0093.1;0.535768,MA0095.1;0,MA0098.1;0,MA0100.1;1.9583,MA0101.1;0.539569,MA0103.1;0.521546,MA0105.1;1.90157,MA0106.1;0.869173,MA0107.1;0.453492,MA0108.2;1.03412,MA0109.1;0,MA0111.1;0.655276,MA0113.1;0.886811,MA0114.1;0.447443,MA0115.1;1.45393,MA0116.1;2.01976,MA0117.1;1.24497,MA0119.1;0.586221,MA0122.1;1.27173,MA0124.1;1.41151,MA0125.1;1.32534,MA0130.1;0,MA0131.1;0.94608,MA0132.1;0,MA0133.1;0,MA0135.1;1.23748,MA0136.1;0.832277,MA0139.1;0.344952,MA0140.1;0.779643,MA0141.1;0.602484,MA0142.1;1.00381,MA0143.1;0.887001,MA0144.1;0.430413,MA0145.1;2.41215,MA0146.1;4.2865,MA0147.1;0.46175,MA0148.1;0.739888,MA0149.1;0.769072,MA0062.2;0.353589,MA0035.2;0.778873,MA0039.2;6.36864,MA0138.2;0.928035,MA0002.2;0.379056,MA0137.2;0.558189,MA0104.2;0.392359,MA0047.2;0.856092,MA0112.2;3.12566,MA0065.2;0.577908,MA0150.1;0.633493,MA0151.1;0,MA0152.1;0.78681,MA0153.1;1.30799,MA0154.1;0.229241,MA0155.1;1.61785,MA0156.1;0.560797,MA0157.1;0.97481,MA0158.1;0,MA0159.1;0.462502,MA0160.1;0.756582,MA0161.1;0,MA0162.1;4.24646,MA0163.1;3.83423,MA0164.1;0.90014,MA0080.2;0.535868,MA0018.2;0.870662,MA0099.2;0.7872,MA0079.2;3.5408,MA0102.2;1.75932,MA0258.1;1.07498,MA0259.1;0.471671,MA0442.1;0}} | ||
| | |||
}} |
Latest revision as of 11:58, 17 September 2013
Full id: C2083_Placental_acantholytic_Amniotic_Endothelial_Tracheal_Urothelial_Fibroblast
Phase1 CAGE Peaks
Hg19::chr10:97050727..97050740,- | p3@PDLIM1 |
Hg19::chr10:97050749..97050772,- | p1@PDLIM1 |
Hg19::chr10:97050777..97050806,- | p2@PDLIM1 |
Hg19::chr10:97050816..97050825,- | p4@PDLIM1 |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.90e-22 | 253 |
embryonic cell | 4.26e-19 | 250 |
squamous epithelial cell | 2.82e-14 | 63 |
endodermal cell | 6.17e-10 | 58 |
endo-epithelial cell | 1.44e-09 | 42 |
mesodermal cell | 9.94e-09 | 121 |
endothelial cell of vascular tree | 2.18e-08 | 24 |
lining cell | 2.78e-08 | 58 |
barrier cell | 2.78e-08 | 58 |
endothelial cell | 1.40e-07 | 36 |
meso-epithelial cell | 4.24e-07 | 45 |
blood vessel endothelial cell | 9.04e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.04e-07 | 18 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 10 |
MA0004.1 | 0.71247 |
MA0006.1 | 0.532262 |
MA0007.1 | 0.6918 |
MA0009.1 | 1.20602 |
MA0014.1 | 1.34758 |
MA0017.1 | 0.577281 |
MA0019.1 | 0.873355 |
MA0024.1 | 1.09684 |
MA0025.1 | 1.34373 |
MA0027.1 | 2.83281 |
MA0028.1 | 0.550763 |
MA0029.1 | 1.11704 |
MA0030.1 | 1.10506 |
MA0031.1 | 1.03735 |
MA0038.1 | 0.824639 |
MA0040.1 | 1.12314 |
MA0041.1 | 0.732902 |
MA0042.1 | 0.697662 |
MA0043.1 | 1.20635 |
MA0046.1 | 1.19471 |
MA0048.1 | 2.82503 |
MA0050.1 | 0.69864 |
MA0051.1 | 0.820063 |
MA0052.1 | 1.12718 |
MA0055.1 | 0.125954 |
MA0056.1 | 0 |
MA0057.1 | 0.248209 |
MA0058.1 | 0.605914 |
MA0059.1 | 0.604454 |
MA0060.1 | 0.393285 |
MA0061.1 | 0.360128 |
MA0063.1 | 0 |
MA0066.1 | 0.825101 |
MA0067.1 | 1.53181 |
MA0068.1 | 0.313194 |
MA0069.1 | 1.19071 |
MA0070.1 | 1.17908 |
MA0071.1 | 0.782546 |
MA0072.1 | 1.1744 |
MA0073.1 | 1.93422 |
MA0074.1 | 0.819248 |
MA0076.1 | 0.623864 |
MA0077.1 | 1.16637 |
MA0078.1 | 0.926725 |
MA0081.1 | 0.604638 |
MA0083.1 | 1.21381 |
MA0084.1 | 1.72172 |
MA0087.1 | 1.17185 |
MA0088.1 | 0.182167 |
MA0089.1 | 0 |
MA0090.1 | 0.640115 |
MA0091.1 | 0.715356 |
MA0092.1 | 0.673508 |
MA0093.1 | 0.535768 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 1.9583 |
MA0101.1 | 0.539569 |
MA0103.1 | 0.521546 |
MA0105.1 | 1.90157 |
MA0106.1 | 0.869173 |
MA0107.1 | 0.453492 |
MA0108.2 | 1.03412 |
MA0109.1 | 0 |
MA0111.1 | 0.655276 |
MA0113.1 | 0.886811 |
MA0114.1 | 0.447443 |
MA0115.1 | 1.45393 |
MA0116.1 | 2.01976 |
MA0117.1 | 1.24497 |
MA0119.1 | 0.586221 |
MA0122.1 | 1.27173 |
MA0124.1 | 1.41151 |
MA0125.1 | 1.32534 |
MA0130.1 | 0 |
MA0131.1 | 0.94608 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 1.23748 |
MA0136.1 | 0.832277 |
MA0139.1 | 0.344952 |
MA0140.1 | 0.779643 |
MA0141.1 | 0.602484 |
MA0142.1 | 1.00381 |
MA0143.1 | 0.887001 |
MA0144.1 | 0.430413 |
MA0145.1 | 2.41215 |
MA0146.1 | 4.2865 |
MA0147.1 | 0.46175 |
MA0148.1 | 0.739888 |
MA0149.1 | 0.769072 |
MA0062.2 | 0.353589 |
MA0035.2 | 0.778873 |
MA0039.2 | 6.36864 |
MA0138.2 | 0.928035 |
MA0002.2 | 0.379056 |
MA0137.2 | 0.558189 |
MA0104.2 | 0.392359 |
MA0047.2 | 0.856092 |
MA0112.2 | 3.12566 |
MA0065.2 | 0.577908 |
MA0150.1 | 0.633493 |
MA0151.1 | 0 |
MA0152.1 | 0.78681 |
MA0153.1 | 1.30799 |
MA0154.1 | 0.229241 |
MA0155.1 | 1.61785 |
MA0156.1 | 0.560797 |
MA0157.1 | 0.97481 |
MA0158.1 | 0 |
MA0159.1 | 0.462502 |
MA0160.1 | 0.756582 |
MA0161.1 | 0 |
MA0162.1 | 4.24646 |
MA0163.1 | 3.83423 |
MA0164.1 | 0.90014 |
MA0080.2 | 0.535868 |
MA0018.2 | 0.870662 |
MA0099.2 | 0.7872 |
MA0079.2 | 3.5408 |
MA0102.2 | 1.75932 |
MA0258.1 | 1.07498 |
MA0259.1 | 0.471671 |
MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
TF | #promoters | Enrichment | p-value | q-value |
---|---|---|---|---|
CCNT2#905 | 4 | 6.33620157696263 | 0.000620310058721564 | 0.00511161134786346 |
CTCF#10664 | 4 | 5.36025637307503 | 0.00121114538164362 | 0.0081543845096363 |
E2F1#1869 | 4 | 4.90738921487932 | 0.00172402235736179 | 0.0106233506980062 |
E2F6#1876 | 4 | 5.01715573169739 | 0.0015780219347306 | 0.00994851097677949 |
EGR1#1958 | 4 | 4.98817909481014 | 0.00161501150007605 | 0.0101254764111204 |
ELF1#1997 | 4 | 4.25809795880754 | 0.00304152556578124 | 0.0160512323680963 |
HEY1#23462 | 4 | 4.04011104310571 | 0.0037530463691798 | 0.0185466267507698 |
MAX#4149 | 4 | 6.45255550900712 | 0.000576761319564549 | 0.00484409935295552 |
PAX5#5079 | 4 | 6.66956553117783 | 0.000505277416948326 | 0.00443041458724424 |
TAF1#6872 | 4 | 3.34304628574529 | 0.00800566489870165 | 0.0321146009739006 |
TBP#6908 | 4 | 3.70677068709639 | 0.00529637781478435 | 0.0243431062182926 |
YY1#7528 | 4 | 4.91117074985386 | 0.0017187183805544 | 0.0106598508787173 |
ZBTB7A#51341 | 4 | 7.3519093078759 | 0.00034222354001599 | 0.00345896489845446 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.