FFCP PHASE1:Hg19::chr3:100428317..100428471,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10342 | |EntrezGene=10342 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11758 | |HGNC=11758 | ||
|TSSclassifier=strong | |||
|UniProt=Q05BK6,C9JUE0,G5E9V1,Q92734 | |UniProt=Q05BK6,C9JUE0,G5E9V1,Q92734 | ||
|association_with_transcript=0bp_to_ENST00000443578,ENST00000463568,ENST00000476228,NM_001195478,uc003dui.2_5end | |association_with_transcript=0bp_to_ENST00000443578,ENST00000463568,ENST00000476228,NM_001195478,uc003dui.2_5end | ||
|cluster_id=chr3:100428317..100428471,+ | |||
|description=CAGE_peak_1_at_TFG_5end | |description=CAGE_peak_1_at_TFG_5end | ||
|id=chr3:100428317..100428471,+ | |id=chr3:100428317..100428471,+ | ||
|ontology_enrichment_celltype=CL:0000548!9.56e-25!679;CL:0000004!9.56e-25!679;CL:0000255!9.56e-25!679;CL:0000012!1.05e-23!682;CL:0000220!3.83e-17!246;CL:0002321!2.82e-16!248;CL:0000144!6.69e-16!625;CL:0000066!2.83e-15!254;CL:0002371!9.71e-15!591;CL:0000055!1.06e-14!180;CL:0000057!8.47e-14!75;CL:0000063!1.37e-12!578;CL:0000222!2.75e-10!119;CL:0000003!4.86e-10!722;CL:0000192!1.42e-07!42;CL:0000514!1.42e-07!42;CL:0000183!2.97e-07!59;CL:0000680!3.19e-07!57;CL:0000056!3.19e-07!57;CL:0000355!3.19e-07!57;CL:0000359!3.33e-07!32;CL:0000187!4.09e-07!54;CL:0002076!9.17e-07!43 | |ontology_enrichment_celltype=CL:0000548!9.56e-25!679;CL:0000004!9.56e-25!679;CL:0000255!9.56e-25!679;CL:0000012!1.05e-23!682;CL:0000220!3.83e-17!246;CL:0002321!2.82e-16!248;CL:0000144!6.69e-16!625;CL:0000066!2.83e-15!254;CL:0002371!9.71e-15!591;CL:0000055!1.06e-14!180;CL:0000057!8.47e-14!75;CL:0000063!1.37e-12!578;CL:0000222!2.75e-10!119;CL:0000003!4.86e-10!722;CL:0000192!1.42e-07!42;CL:0000514!1.42e-07!42;CL:0000183!2.97e-07!59;CL:0000680!3.19e-07!57;CL:0000056!3.19e-07!57;CL:0000355!3.19e-07!57;CL:0000359!3.33e-07!32;CL:0000187!4.09e-07!54;CL:0002076!9.17e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.08e-07;19!CL:0000134;5.24e-07;55!CL:0000359;7.04e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.98e-16,250;CL:0000066,1.54e-15,253;CL:0000057,5.30e-14,76;CL:0000222,4.37e-10,121;CL:0000349,2.09e-07,19;CL:0000359,3.33e-07,32;CL:0000192,3.99e-07,43;CL:0000514,3.99e-07,43;CL:0000680,7.29e-07,58;CL:0000056,7.29e-07,58;CL:0000355,7.29e-07,58;CL:0000187,9.50e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!4.21e-11!143;UBERON:0003102!4.76e-10!95;UBERON:0000486!8.75e-10!82;UBERON:0000468!1.08e-09!659;UBERON:0002100!3.11e-09!216;UBERON:0000914!1.20e-08!83;UBERON:0002329!1.20e-08!83;UBERON:0003077!1.20e-08!83;UBERON:0003059!1.20e-08!83;UBERON:0007282!1.20e-08!83;UBERON:0009618!1.20e-08!83;UBERON:0007285!1.20e-08!83;UBERON:0000467!1.86e-08!625;UBERON:0000480!1.99e-08!626;UBERON:0004119!2.53e-08!169;UBERON:0000925!2.53e-08!169;UBERON:0006595!2.53e-08!169;UBERON:0000490!3.34e-08!138;UBERON:0003104!3.72e-08!238;UBERON:0009142!3.72e-08!238;UBERON:0000478!1.21e-07!24;UBERON:0002049!1.25e-07!79;UBERON:0007798!1.25e-07!79;UBERON:0003914!1.71e-07!118;UBERON:0004923!1.89e-07!57;UBERON:0000475!3.14e-07!365;UBERON:0000481!4.91e-07!347;UBERON:0004290!5.63e-07!70;UBERON:0002097!9.23e-07!40 | |ontology_enrichment_uberon=UBERON:0005256!4.21e-11!143;UBERON:0003102!4.76e-10!95;UBERON:0000486!8.75e-10!82;UBERON:0000468!1.08e-09!659;UBERON:0002100!3.11e-09!216;UBERON:0000914!1.20e-08!83;UBERON:0002329!1.20e-08!83;UBERON:0003077!1.20e-08!83;UBERON:0003059!1.20e-08!83;UBERON:0007282!1.20e-08!83;UBERON:0009618!1.20e-08!83;UBERON:0007285!1.20e-08!83;UBERON:0000467!1.86e-08!625;UBERON:0000480!1.99e-08!626;UBERON:0004119!2.53e-08!169;UBERON:0000925!2.53e-08!169;UBERON:0006595!2.53e-08!169;UBERON:0000490!3.34e-08!138;UBERON:0003104!3.72e-08!238;UBERON:0009142!3.72e-08!238;UBERON:0000478!1.21e-07!24;UBERON:0002049!1.25e-07!79;UBERON:0007798!1.25e-07!79;UBERON:0003914!1.71e-07!118;UBERON:0004923!1.89e-07!57;UBERON:0000475!3.14e-07!365;UBERON:0000481!4.91e-07!347;UBERON:0004290!5.63e-07!70;UBERON:0002097!9.23e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.16e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.20e-11,99;UBERON:0005256,1.35e-09,122;UBERON:0000486,2.01e-09,83;UBERON:0004119,2.98e-09,160;UBERON:0000925,2.98e-09,160;UBERON:0006595,2.98e-09,160;UBERON:0004923,4.54e-09,66;UBERON:0000490,8.38e-09,148;UBERON:0002100,2.80e-08,199;UBERON:0003104,2.99e-08,160;UBERON:0009142,2.99e-08,160;UBERON:0003914,9.61e-08,117;UBERON:0000478,1.21e-07,24;UBERON:0002049,1.87e-07,78;UBERON:0007798,1.87e-07,78;UBERON:0000119,6.61e-07,309;UBERON:0002097,7.89e-07,41 | |||
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| ||
|short_description=p1@TFG | |short_description=p1@TFG | ||
}} | }} |
Latest revision as of 05:31, 19 September 2015
Short description: | p1@TFG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TFG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000443578, ENST00000463568, ENST00000476228, NM_001195478, uc003dui.2_5end |
EntrezGene: | TFG |
HGNC: | 11758 |
UniProt: | Q05BK6C9JUE0G5E9V1Q92734 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.98e-16 | 250 |
epithelial cell | 1.54e-15 | 253 |
fibroblast | 5.30e-14 | 76 |
mesodermal cell | 4.37e-10 | 121 |
extraembryonic cell | 2.09e-07 | 19 |
vascular associated smooth muscle cell | 3.33e-07 | 32 |
smooth muscle cell | 3.99e-07 | 43 |
smooth muscle myoblast | 3.99e-07 | 43 |
muscle precursor cell | 7.29e-07 | 58 |
myoblast | 7.29e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.29e-07 | 58 |
muscle cell | 9.50e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.20e-11 | 99 |
trunk mesenchyme | 1.35e-09 | 122 |
multilaminar epithelium | 2.01e-09 | 83 |
endoderm-derived structure | 2.98e-09 | 160 |
endoderm | 2.98e-09 | 160 |
presumptive endoderm | 2.98e-09 | 160 |
organ component layer | 4.54e-09 | 66 |
unilaminar epithelium | 8.38e-09 | 148 |
trunk | 2.80e-08 | 199 |
mesenchyme | 2.99e-08 | 160 |
entire embryonic mesenchyme | 2.99e-08 | 160 |
epithelial tube | 9.61e-08 | 117 |
extraembryonic structure | 1.21e-07 | 24 |
vasculature | 1.87e-07 | 78 |
vascular system | 1.87e-07 | 78 |
cell layer | 6.61e-07 | 309 |
skin of body | 7.89e-07 | 41 |