FFCP PHASE1:Hg19::chr22:30970644..30970658,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9514 | |EntrezGene=9514 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24240 | |HGNC=24240 | ||
|TSSclassifier=strong | |||
|UniProt=Q99999 | |UniProt=Q99999 | ||
|association_with_transcript=-70bp_to_ENST00000406361_5end | |association_with_transcript=-70bp_to_ENST00000406361_5end | ||
|cluster_id=chr22:30970644..30970658,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_GAL3ST1_5end | |description=CAGE_peak_4_at_GAL3ST1_5end | ||
|id=chr22:30970644..30970658,- | |id=chr22:30970644..30970658,- | ||
|ontology_enrichment_celltype=CL:1000507!1.85e-08!12;CL:1000494!1.85e-08!12;CL:1000497!1.46e-07!18;CL:0002518!1.46e-07!18;CL:1000449!3.85e-07!16 | |ontology_enrichment_celltype=CL:1000507!1.85e-08!12;CL:1000494!1.85e-08!12;CL:1000497!1.46e-07!18;CL:0002518!1.46e-07!18;CL:1000449!3.85e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.66e-14;10!CL:1000494;1.66e-14;10!CL:1000497;3.95e-11;17!CL:0002518;3.95e-11;17!CL:0000650;1.21e-09;2!CL:1000500;1.21e-09;2!CL:1000618;1.21e-09;2!CL:1001318;1.21e-09;2!CL:0002173;1.21e-09;2!CL:1000449;1.89e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.42e-14,10;CL:1000494,2.42e-14,10;CL:1000497,4.99e-11,17;CL:0002518,4.99e-11,17;CL:0000650,1.60e-09,2;CL:1000500,1.60e-09,2;CL:1000618,1.60e-09,2;CL:1001318,1.60e-09,2;CL:0002173,1.60e-09,2;CL:1000449,2.41e-09,15 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.05e-13;3!UBERON:0003057;3.05e-13;3!UBERON:0006601;2.05e-10;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.35e-40!115;UBERON:0001049!9.89e-35!57;UBERON:0005068!9.89e-35!57;UBERON:0006241!9.89e-35!57;UBERON:0007135!9.89e-35!57;UBERON:0002616!7.04e-29!59;UBERON:0001017!2.80e-28!82;UBERON:0003075!3.23e-28!86;UBERON:0007284!3.23e-28!86;UBERON:0001893!1.04e-27!34;UBERON:0002020!1.17e-27!34;UBERON:0003528!1.17e-27!34;UBERON:0005743!2.57e-27!86;UBERON:0002780!3.04e-27!41;UBERON:0001890!3.04e-27!41;UBERON:0006240!3.04e-27!41;UBERON:0002791!1.92e-26!33;UBERON:0000955!2.05e-26!69;UBERON:0006238!2.05e-26!69;UBERON:0003080!2.47e-26!42;UBERON:0002346!3.41e-26!90;UBERON:0001869!4.16e-25!32;UBERON:0000073!1.50e-24!94;UBERON:0001016!1.50e-24!94;UBERON:0003056!2.33e-20!61;UBERON:0002619!3.27e-20!22;UBERON:0000025!3.98e-18!194;UBERON:0001950!4.02e-18!20;UBERON:0000956!4.45e-17!25;UBERON:0000203!4.45e-17!25;UBERON:0000064!1.66e-15!219;UBERON:0004111!4.96e-15!241;UBERON:0000483!5.76e-14!309;UBERON:0000481!6.12e-14!347;UBERON:0000033!9.94e-14!123;UBERON:0000119!1.40e-13!312;UBERON:0000477!5.30e-13!286;UBERON:0002308!9.14e-13!9;UBERON:0000125!9.14e-13!9;UBERON:0000153!2.05e-12!129;UBERON:0007811!2.05e-12!129;UBERON:0002420!2.59e-12!9;UBERON:0007245!2.59e-12!9;UBERON:0010009!2.59e-12!9;UBERON:0010011!2.59e-12!9;UBERON:0000454!2.59e-12!9;UBERON:0000062!3.75e-12!511;UBERON:0004121!2.16e-11!169;UBERON:0000924!9.25e-11!173;UBERON:0006601!9.25e-11!173;UBERON:0009663!4.29e-10!7;UBERON:0003076!2.01e-09!15;UBERON:0003057!2.01e-09!15;UBERON:0000489!7.09e-09!32;UBERON:0009773!1.85e-08!12;UBERON:0001231!1.85e-08!12;UBERON:0004810!1.85e-08!12;UBERON:0001871!2.87e-08!7;UBERON:0000922!3.69e-08!612;UBERON:0000475!3.88e-08!365;UBERON:0005172!1.56e-07!55;UBERON:0005173!1.56e-07!55;UBERON:0000349!3.45e-07!5;UBERON:0004732!3.46e-07!13;UBERON:0004211!3.85e-07!16;UBERON:0001285!3.85e-07!16;UBERON:0007684!3.85e-07!16;UBERON:0003220!3.85e-07!16;UBERON:0004208!3.85e-07!16;UBERON:0002298!8.52e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!9.35e-40!115;UBERON:0001049!9.89e-35!57;UBERON:0005068!9.89e-35!57;UBERON:0006241!9.89e-35!57;UBERON:0007135!9.89e-35!57;UBERON:0002616!7.04e-29!59;UBERON:0001017!2.80e-28!82;UBERON:0003075!3.23e-28!86;UBERON:0007284!3.23e-28!86;UBERON:0001893!1.04e-27!34;UBERON:0002020!1.17e-27!34;UBERON:0003528!1.17e-27!34;UBERON:0005743!2.57e-27!86;UBERON:0002780!3.04e-27!41;UBERON:0001890!3.04e-27!41;UBERON:0006240!3.04e-27!41;UBERON:0002791!1.92e-26!33;UBERON:0000955!2.05e-26!69;UBERON:0006238!2.05e-26!69;UBERON:0003080!2.47e-26!42;UBERON:0002346!3.41e-26!90;UBERON:0001869!4.16e-25!32;UBERON:0000073!1.50e-24!94;UBERON:0001016!1.50e-24!94;UBERON:0003056!2.33e-20!61;UBERON:0002619!3.27e-20!22;UBERON:0000025!3.98e-18!194;UBERON:0001950!4.02e-18!20;UBERON:0000956!4.45e-17!25;UBERON:0000203!4.45e-17!25;UBERON:0000064!1.66e-15!219;UBERON:0004111!4.96e-15!241;UBERON:0000483!5.76e-14!309;UBERON:0000481!6.12e-14!347;UBERON:0000033!9.94e-14!123;UBERON:0000119!1.40e-13!312;UBERON:0000477!5.30e-13!286;UBERON:0002308!9.14e-13!9;UBERON:0000125!9.14e-13!9;UBERON:0000153!2.05e-12!129;UBERON:0007811!2.05e-12!129;UBERON:0002420!2.59e-12!9;UBERON:0007245!2.59e-12!9;UBERON:0010009!2.59e-12!9;UBERON:0010011!2.59e-12!9;UBERON:0000454!2.59e-12!9;UBERON:0000062!3.75e-12!511;UBERON:0004121!2.16e-11!169;UBERON:0000924!9.25e-11!173;UBERON:0006601!9.25e-11!173;UBERON:0009663!4.29e-10!7;UBERON:0003076!2.01e-09!15;UBERON:0003057!2.01e-09!15;UBERON:0000489!7.09e-09!32;UBERON:0009773!1.85e-08!12;UBERON:0001231!1.85e-08!12;UBERON:0004810!1.85e-08!12;UBERON:0001871!2.87e-08!7;UBERON:0000922!3.69e-08!612;UBERON:0000475!3.88e-08!365;UBERON:0005172!1.56e-07!55;UBERON:0005173!1.56e-07!55;UBERON:0000349!3.45e-07!5;UBERON:0004732!3.46e-07!13;UBERON:0004211!3.85e-07!16;UBERON:0001285!3.85e-07!16;UBERON:0007684!3.85e-07!16;UBERON:0003220!3.85e-07!16;UBERON:0004208!3.85e-07!16;UBERON:0002298!8.52e-07!8 | ||
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| ||
|short_description=p4@GAL3ST1 | |short_description=p4@GAL3ST1 | ||
}} | }} |
Latest revision as of 18:32, 19 September 2015
Short description: | p4@GAL3ST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GAL3ST1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -70bp_to_ENST00000406361_5end |
EntrezGene: | GAL3ST1 |
HGNC: | 24240 |
UniProt: | Q99999 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.42e-14 | 10 |
nephron tubule epithelial cell | 2.42e-14 | 10 |
kidney cell | 4.99e-11 | 17 |
kidney epithelial cell | 4.99e-11 | 17 |
mesangial cell | 1.60e-09 | 2 |
kidney interstitial cell | 1.60e-09 | 2 |
juxtaglomerular complex cell | 1.60e-09 | 2 |
renal interstitial pericyte | 1.60e-09 | 2 |
extraglomerular mesangial cell | 1.60e-09 | 2 |
epithelial cell of nephron | 2.41e-09 | 15 |