FFCP PHASE1:Hg19::chr1:55331310..55331365,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1718 | |EntrezGene=1718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2859 | |HGNC=2859 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010ooi.1_5end | |association_with_transcript=0bp_to_uc010ooi.1_5end | ||
|cluster_id=chr1:55331310..55331365,- | |||
|description=CAGE_peak_3_at_DHCR24_5end | |description=CAGE_peak_3_at_DHCR24_5end | ||
|id=chr1:55331310..55331365,- | |id=chr1:55331310..55331365,- | ||
|ontology_enrichment_celltype=CL:1000507!2.80e-24!12;CL:1000494!2.80e-24!12;CL:1000497!1.52e-23!18;CL:0002518!1.52e-23!18;CL:1000449!8.75e-18!16;CL:0000181!2.25e-15!12;CL:0000417!2.25e-15!12;CL:0000668!2.25e-15!12;CL:0000414!2.25e-15!12;CL:0000412!2.25e-15!12;CL:0000182!2.25e-15!12;CL:0002681!6.60e-10!13;CL:0002584!6.60e-10!13;CL:0000066!2.55e-08!254;CL:0000159!3.02e-08!2;CL:0000223!8.53e-07!59 | |ontology_enrichment_celltype=CL:1000507!2.80e-24!12;CL:1000494!2.80e-24!12;CL:1000497!1.52e-23!18;CL:0002518!1.52e-23!18;CL:1000449!8.75e-18!16;CL:0000181!2.25e-15!12;CL:0000417!2.25e-15!12;CL:0000668!2.25e-15!12;CL:0000414!2.25e-15!12;CL:0000412!2.25e-15!12;CL:0000182!2.25e-15!12;CL:0002681!6.60e-10!13;CL:0002584!6.60e-10!13;CL:0000066!2.55e-08!254;CL:0000159!3.02e-08!2;CL:0000223!8.53e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:1000497;2.87e-27;17!CL:0002518;2.87e-27;17!CL:1000507;9.52e-27;10!CL:1000494;9.52e-27;10!CL:1000449;1.05e-17;15!CL:0000182;2.56e-16;12!CL:0000239;5.16e-11;3!CL:1000615;5.16e-11;3!CL:0002306;5.16e-11;3!CL:0002581;9.53e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.14e-27,17;CL:0002518,3.14e-27,17;CL:1000507,1.07e-26,10;CL:1000494,1.07e-26,10;CL:1000449,1.13e-17,15;CL:0000182,2.44e-16,12;CL:0000239,5.16e-11,3;CL:1000615,5.16e-11,3;CL:0002306,5.16e-11,3;CL:0002581,8.49e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.02e-19;31!UBERON:0004161;9.26e-18;11!UBERON:0009497;5.23e-15;13!UBERON:0003918;1.43e-12;10!UBERON:0007687;1.43e-12;10 | |||
|ontology_enrichment_disease=DOID:4468!1.22e-08!2;DOID:299!3.26e-08!25 | |ontology_enrichment_disease=DOID:4468!1.22e-08!2;DOID:299!3.26e-08!25 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!6.62e-35!55;UBERON:0005173!6.62e-35!55;UBERON:0002417!7.39e-31!61;UBERON:0000916!7.39e-31!61;UBERON:0009773!2.80e-24!12;UBERON:0001231!2.80e-24!12;UBERON:0004810!2.80e-24!12;UBERON:0002113!2.38e-21!27;UBERON:0003918!2.38e-21!27;UBERON:0005095!2.38e-21!27;UBERON:0007687!2.38e-21!27;UBERON:0005177!1.04e-19!107;UBERON:0008835!1.73e-19!22;UBERON:0003894!1.73e-19!22;UBERON:0002107!3.83e-19!19;UBERON:0006925!3.83e-19!19;UBERON:0008836!3.83e-19!19;UBERON:0005057!4.91e-19!26;UBERON:0009854!1.55e-18!23;UBERON:0004211!8.75e-18!16;UBERON:0001285!8.75e-18!16;UBERON:0007684!8.75e-18!16;UBERON:0003220!8.75e-18!16;UBERON:0004208!8.75e-18!16;UBERON:0000489!1.53e-17!32;UBERON:0007499!7.35e-17!25;UBERON:0009497!7.35e-17!25;UBERON:0000015!7.35e-17!25;UBERON:0002423!7.35e-17!25;UBERON:0006235!7.35e-17!25;UBERON:0004161!7.35e-17!25;UBERON:0009569!1.03e-16!113;UBERON:0006555!1.22e-16!17;UBERON:0005103!1.22e-16!17;UBERON:0000083!1.22e-16!17;UBERON:0009201!1.22e-16!17;UBERON:0004819!1.22e-16!17;UBERON:0006553!1.22e-16!17;UBERON:0003074!1.22e-16!17;UBERON:0003060!1.22e-16!17;UBERON:0003887!3.96e-16!21;UBERON:0009856!4.05e-16!26;UBERON:0006554!5.53e-16!44;UBERON:0000080!1.28e-15!18;UBERON:0002120!1.28e-15!18;UBERON:0004875!1.28e-15!18;UBERON:0005721!1.28e-15!18;UBERON:0005754!1.28e-15!18;UBERON:0007297!1.28e-15!18;UBERON:0001008!1.50e-15!45;UBERON:0004876!6.88e-14!20;UBERON:0000466!8.54e-13!126;UBERON:0000058!1.23e-12!26;UBERON:0003929!2.20e-12!54;UBERON:0002368!2.52e-11!35;UBERON:0002365!6.32e-11!31;UBERON:0002330!6.32e-11!31;UBERON:0002100!2.15e-10!216;UBERON:0003064!5.04e-10!37;UBERON:0000949!5.64e-10!45;UBERON:0001225!6.60e-10!13;UBERON:0008987!6.60e-10!13;UBERON:0004921!1.13e-09!129;UBERON:0004185!1.13e-09!129;UBERON:0003104!1.60e-09!238;UBERON:0009142!1.60e-09!238;UBERON:0005256!1.81e-09!143;UBERON:0005911!2.55e-09!82;UBERON:0003914!2.89e-08!118;UBERON:0002530!3.60e-08!59;UBERON:0001851!6.32e-08!16;UBERON:0000481!1.52e-07!347;UBERON:0000353!2.02e-07!17;UBERON:0001007!3.34e-07!155;UBERON:0001555!3.34e-07!155;UBERON:0007026!3.34e-07!155 | |ontology_enrichment_uberon=UBERON:0005172!6.62e-35!55;UBERON:0005173!6.62e-35!55;UBERON:0002417!7.39e-31!61;UBERON:0000916!7.39e-31!61;UBERON:0009773!2.80e-24!12;UBERON:0001231!2.80e-24!12;UBERON:0004810!2.80e-24!12;UBERON:0002113!2.38e-21!27;UBERON:0003918!2.38e-21!27;UBERON:0005095!2.38e-21!27;UBERON:0007687!2.38e-21!27;UBERON:0005177!1.04e-19!107;UBERON:0008835!1.73e-19!22;UBERON:0003894!1.73e-19!22;UBERON:0002107!3.83e-19!19;UBERON:0006925!3.83e-19!19;UBERON:0008836!3.83e-19!19;UBERON:0005057!4.91e-19!26;UBERON:0009854!1.55e-18!23;UBERON:0004211!8.75e-18!16;UBERON:0001285!8.75e-18!16;UBERON:0007684!8.75e-18!16;UBERON:0003220!8.75e-18!16;UBERON:0004208!8.75e-18!16;UBERON:0000489!1.53e-17!32;UBERON:0007499!7.35e-17!25;UBERON:0009497!7.35e-17!25;UBERON:0000015!7.35e-17!25;UBERON:0002423!7.35e-17!25;UBERON:0006235!7.35e-17!25;UBERON:0004161!7.35e-17!25;UBERON:0009569!1.03e-16!113;UBERON:0006555!1.22e-16!17;UBERON:0005103!1.22e-16!17;UBERON:0000083!1.22e-16!17;UBERON:0009201!1.22e-16!17;UBERON:0004819!1.22e-16!17;UBERON:0006553!1.22e-16!17;UBERON:0003074!1.22e-16!17;UBERON:0003060!1.22e-16!17;UBERON:0003887!3.96e-16!21;UBERON:0009856!4.05e-16!26;UBERON:0006554!5.53e-16!44;UBERON:0000080!1.28e-15!18;UBERON:0002120!1.28e-15!18;UBERON:0004875!1.28e-15!18;UBERON:0005721!1.28e-15!18;UBERON:0005754!1.28e-15!18;UBERON:0007297!1.28e-15!18;UBERON:0001008!1.50e-15!45;UBERON:0004876!6.88e-14!20;UBERON:0000466!8.54e-13!126;UBERON:0000058!1.23e-12!26;UBERON:0003929!2.20e-12!54;UBERON:0002368!2.52e-11!35;UBERON:0002365!6.32e-11!31;UBERON:0002330!6.32e-11!31;UBERON:0002100!2.15e-10!216;UBERON:0003064!5.04e-10!37;UBERON:0000949!5.64e-10!45;UBERON:0001225!6.60e-10!13;UBERON:0008987!6.60e-10!13;UBERON:0004921!1.13e-09!129;UBERON:0004185!1.13e-09!129;UBERON:0003104!1.60e-09!238;UBERON:0009142!1.60e-09!238;UBERON:0005256!1.81e-09!143;UBERON:0005911!2.55e-09!82;UBERON:0003914!2.89e-08!118;UBERON:0002530!3.60e-08!59;UBERON:0001851!6.32e-08!16;UBERON:0000481!1.52e-07!347;UBERON:0000353!2.02e-07!17;UBERON:0001007!3.34e-07!155;UBERON:0001555!3.34e-07!155;UBERON:0007026!3.34e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0005172;9.01e-31;52!UBERON:0005173;9.01e-31;52!UBERON:0002113;4.82e-30;24!UBERON:0011143;4.82e-30;24!UBERON:0004211;9.52e-27;10!UBERON:0009773;9.52e-27;10!UBERON:0001231;9.52e-27;10!UBERON:0004810;9.52e-27;10!UBERON:0002107;2.38e-25;19!UBERON:0006925;2.38e-25;19!UBERON:0000489;1.34e-24;29!UBERON:0006554;9.98e-24;30!UBERON:0001008;9.98e-24;30!UBERON:0002417;2.06e-21;58!UBERON:0000916;2.06e-21;58!UBERON:0002423;5.13e-19;25!UBERON:0006555;1.05e-17;15!UBERON:0004819;1.05e-17;15!UBERON:0001285;1.05e-17;15!UBERON:0007684;1.05e-17;15!UBERON:0002365;1.39e-14;31!UBERON:0002330;1.39e-14;31!UBERON:0002368;7.11e-13;33!UBERON:0000949;8.86e-12;43!UBERON:0006853;5.16e-11;3!UBERON:0007685;5.16e-11;3!UBERON:0004134;5.16e-11;3!UBERON:0005177;1.04e-08;99!UBERON:0009569;1.39e-07;110 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,6.78e-43,54;UBERON:0005173,6.78e-43,54;UBERON:0002417,2.74e-38,60;UBERON:0000916,2.74e-38,60;UBERON:0002113,1.41e-27,26;UBERON:0003918,1.41e-27,26;UBERON:0011143,1.41e-27,26;UBERON:0005095,1.41e-27,26;UBERON:0007687,1.41e-27,26;UBERON:0004810,1.07e-26,10;UBERON:0002107,2.13e-25,19;UBERON:0006925,2.13e-25,19;UBERON:0008836,2.13e-25,19;UBERON:0005177,4.50e-24,101;UBERON:0000489,7.02e-23,31;UBERON:0008835,8.55e-22,22;UBERON:0003894,8.55e-22,22;UBERON:0009854,8.41e-21,23;UBERON:0007499,4.71e-19,25;UBERON:0009497,4.71e-19,25;UBERON:0000015,4.71e-19,25;UBERON:0002423,4.71e-19,25;UBERON:0006235,4.71e-19,25;UBERON:0004161,4.71e-19,25;UBERON:0009569,5.26e-19,112;UBERON:0009856,2.80e-18,26;UBERON:0004211,1.13e-17,15;UBERON:0009773,1.13e-17,15;UBERON:0001231,1.13e-17,15;UBERON:0001285,1.13e-17,15;UBERON:0007684,1.13e-17,15;UBERON:0004208,1.13e-17,15;UBERON:0006555,1.53e-16,16;UBERON:0004819,1.53e-16,16;UBERON:0002365,3.70e-15,31;UBERON:0002330,3.70e-15,31;UBERON:0006554,1.48e-14,47;UBERON:0001008,3.21e-14,48;UBERON:0002368,2.66e-13,35;UBERON:0000949,1.02e-12,45;UBERON:0003104,2.60e-12,160;UBERON:0009142,2.60e-12,160;UBERON:0006853,5.16e-11,3;UBERON:0007685,5.16e-11,3;UBERON:0004134,5.16e-11,3;UBERON:0002100,1.64e-10,199;UBERON:0003914,2.33e-10,117;UBERON:0003103,1.43e-09,68;UBERON:0003929,3.09e-08,54;UBERON:0002530,1.91e-07,59 | |||
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| ||
|short_description=p3@DHCR24 | |short_description=p3@DHCR24 | ||
}} | }} |
Latest revision as of 15:09, 18 September 2015
Short description: | p3@DHCR24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DHCR24_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010ooi.1_5end |
EntrezGene: | DHCR24 |
HGNC: | 2859 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.14e-27 | 17 |
kidney epithelial cell | 3.14e-27 | 17 |
kidney tubule cell | 1.07e-26 | 10 |
nephron tubule epithelial cell | 1.07e-26 | 10 |
epithelial cell of nephron | 1.13e-17 | 15 |
hepatocyte | 2.44e-16 | 12 |
brush border epithelial cell | 5.16e-11 | 3 |
kidney cortex tubule cell | 5.16e-11 | 3 |
epithelial cell of proximal tubule | 5.16e-11 | 3 |
perirenal preadipocyte | 8.49e-09 | 1 |