FFCP PHASE1:Hg19::chr1:41327085..41327095,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:41327085..41327095,- | |||
|coexpression_cluster_id=C132 | |||
|description=CAGE_peak_at_chr1:41327085..41327095,- | |description=CAGE_peak_at_chr1:41327085..41327095,- | ||
|id=chr1:41327085..41327095,- | |id=chr1:41327085..41327095,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000317;7.14e-26;2!CL:1000448;7.14e-26;2!CL:0002308;7.14e-26;2!CL:0002140;7.14e-26;2!CL:0000622;3.26e-11;5!CL:0002188;3.26e-11;5!CL:0000154;1.44e-09;6!CL:1000746;2.18e-08;7!CL:1000612;2.18e-08;7!CL:0000150;8.37e-07;9!CL:0000362;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,9.18e-26,2;CL:1000448,9.18e-26,2;CL:0002308,9.18e-26,2;CL:0002140,9.18e-26,2;CL:0002188,3.26e-11,5;CL:0000622,3.60e-11,5;CL:0000154,1.57e-09,6;CL:1000746,2.18e-08,7;CL:1000612,2.18e-08,7;CL:0000150,8.85e-07,9;CL:0000362,8.85e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8692;3.48e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.80e-07,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;7.14e-26;2!UBERON:0007771;7.14e-26;2!UBERON:0003297;7.14e-26;2!UBERON:0001821;7.14e-26;2!UBERON:0003487;7.14e-26;2!UBERON:0001820;7.14e-26;2!UBERON:0000074;2.18e-08;7!UBERON:0001229;2.18e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,9.18e-26,2;UBERON:0007771,9.18e-26,2;UBERON:0003297,9.18e-26,2;UBERON:0001821,9.18e-26,2;UBERON:0003487,9.18e-26,2;UBERON:0001820,9.18e-26,2;UBERON:0005089,9.18e-26,2;UBERON:0005088,9.18e-26,2;UBERON:0010532,2.18e-08,7;UBERON:0000074,2.18e-08,7;UBERON:0001229,2.18e-08,7;UBERON:0001230,2.18e-08,7;UBERON:0003220,2.18e-08,7;UBERON:0005749,2.18e-08,7;UBERON:0004199,2.18e-08,7;UBERON:0004209,2.18e-08,7;UBERON:0004198,2.18e-08,7;UBERON:0005103,1.69e-07,8;UBERON:0000083,1.69e-07,8;UBERON:0009201,1.69e-07,8;UBERON:0006553,1.69e-07,8;UBERON:0003074,1.69e-07,8;UBERON:0003060,1.69e-07,8;UBERON:0000080,8.37e-07,9;UBERON:0002120,8.37e-07,9;UBERON:0004875,8.37e-07,9;UBERON:0005721,8.37e-07,9;UBERON:0005754,8.37e-07,9;UBERON:0007297,8.37e-07,9 | |||
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| ||
|short_description=p@chr1:41327085..41327095,- | |short_description=p@chr1:41327085..41327095,- | ||
}} | }} |
Latest revision as of 08:14, 28 July 2015
Short description: | p@chr1:41327085..41327095, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:41327085..41327095, - |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 9.18e-26 | 2 |
epithelial cell of sweat gland | 9.18e-26 | 2 |
epithelial cell of skin gland | 9.18e-26 | 2 |
acinar cell of sebaceous gland | 9.18e-26 | 2 |
glomerular endothelial cell | 3.26e-11 | 5 |
acinar cell | 3.60e-11 | 5 |
protein secreting cell | 1.57e-09 | 6 |
glomerular cell | 2.18e-08 | 7 |
kidney corpuscule cell | 2.18e-08 | 7 |
glandular epithelial cell | 8.85e-07 | 9 |
epidermal cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin gland | 9.18e-26 | 2 |
epidermis gland | 9.18e-26 | 2 |
gland of integumental system | 9.18e-26 | 2 |
sebaceous gland | 9.18e-26 | 2 |
skin sebaceous gland | 9.18e-26 | 2 |
sweat gland | 9.18e-26 | 2 |
sweat gland placode | 9.18e-26 | 2 |
sebaceous gland placode | 9.18e-26 | 2 |
primitive nephron | 2.18e-08 | 7 |
renal glomerulus | 2.18e-08 | 7 |
renal corpuscle | 2.18e-08 | 7 |
glomerular capsule | 2.18e-08 | 7 |
metanephric mesenchyme | 2.18e-08 | 7 |
glomerular tuft | 2.18e-08 | 7 |
S-shaped body | 2.18e-08 | 7 |
renal vesicle | 2.18e-08 | 7 |
comma-shaped body | 2.18e-08 | 7 |
mesonephric epithelium | 1.69e-07 | 8 |
mesonephric tubule | 1.69e-07 | 8 |
nephric duct | 1.69e-07 | 8 |
renal duct | 1.69e-07 | 8 |
mesonephric duct | 1.69e-07 | 8 |
pronephric duct | 1.69e-07 | 8 |
mesonephros | 8.37e-07 | 9 |
pronephros | 8.37e-07 | 9 |
nephrogenic cord | 8.37e-07 | 9 |
pronephric mesoderm | 8.37e-07 | 9 |
rostral part of nephrogenic cord | 8.37e-07 | 9 |
presumptive pronephric mesoderm | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.80e-07 | 31 |